XLOC_011788.2 (mRNA) -

Overview
NameXLOC_011788.2
Unique NameXLOC_011788.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000423_pilon:186554..187050+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011788.2 ID=XLOC_011788.2|Name=XLOC_011788.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=497bp|location=Sequence derived from alignment at sc0000423_pilon:186554..187050+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCTGAACGAGAAGTATCGAGTACAAGCGAGAGTGACACCTCTTCA TCCGAAGACGAAAGTGACTATGAAACTTGTTCTGAAGGGAGAAGCGGCAG TTTAGATTGGTGTGAGTGTGAAGGCTGCCAAATCGAAACAAGAGAAATTG ATTGTTTGTGTTGTAATGAAGTCGCAgccttaaatgaaaaatttgatcag GGAGACTTTCAGTGCATTATTGACTCACCACAATTCCCAAAAATGTGCCT TGACGAGGATATTTTGGGGAATGTACTGACTGGGCTACACGAGACAAAAG GAGATCATTTGGAAGAGATACCGTCGAATAGATCCCTAAGATACGCAGCA TACAGGCAATTTTCTTGGTGGGTTTTCAAGAGATTGGGAAAAAACAATCG CCGAGTAATCCCATCATGTGTGTTTTCAAAGTACCGAAGTACCTTCCCTG ACCCTGAAGGAAAATATACCAAATATAAGAAAGGTGAAAAAGACTAG

Coding sequence (CDS) from alignment at sc0000423_pilon:186554..187050+

>XLOC_011788.2 ID=XLOC_011788.2|Name=XLOC_011788.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=922bp|location=Sequence derived from alignment at sc0000423_pilon:186554..187050+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCTGAACGAGAAGTATCGAGTACAAGCGAGAGTGACACCTCTTCA
TCCGAAGACGAAAGTGACTATGAAACTTGTTCTGAAGGGAGAAGCGGCAG
TTTAGATTGGTGTGAGTGTGAAGGCTGCCAAATCGAAACAAGAGAAATTG
ATTGTTTGTGTTGTAATGAAGTCGCAgccttaaatgaaaaatttgatcag
GGAGACTTTCAGTGCATTATTGACTCACCACAATTCCCAAAAATGTGCCT
TGACGAGATGAGCCTGAACGAGAAGTATCGAGTACAAGCGAGAGTGACAC
CTCTTCATCCGAAGACGAAAGTGACTATGAAACTTGTTCTGAAGGGAGAA
GCGGCAGTTTAGATTGGTGTGAGTGTGAAGGCTGCCAAATCGAAACAAGA
GAAATTGATTGTTTGTGTTGTAATGAAGTCGCAgccttaaatgaaaaatt
tgatcagGGAGACTTTCAGTGCATTATTGACTCACCACAATTCCCAAAAA
TGTGCCTTGACGAGACAAAAGGAGATCATTTGGAAGAGATACCGTCGAAT
AGATCCCTAAGATACGCAGCATACAGGCAATTTTCTTGGTGGGTTTTCAA
GAGATTGGGAAAAAACAATCGCCGAGTAATCCCATCATGTGTGTTTTCAA
AGTACCGAAGTACCTTCCCTGACCCTGAAGGAAAATATACCAAATATAAG
AAAGGTGAAAAAGACTAGACAAAAGGAGATCATTTGGAAGAGATACCGTC
GAATAGATCCCTAAGATACGCAGCATACAGGCAATTTTCTTGGTGGGTTT
TCAAGAGATTGGGAAAAAACAATCGCCGAGTAATCCCATCATGTGTGTTT
TCAAAGTACCGAAGTACCTTCCCTGACCCTGAAGGAAAATATACCAAATA
TAAGAAAGGTGAAAAAGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011788.2XLOC_011788.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000423_pilongenomesc0000423_pilon:186554..187050 +
Properties
Property NameValue
Aaloc247-450:294
Aaloc52-246:63
Aaloc43-51:48
Aaloc1-42:1