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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000285_pilon:170220..174110+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011692 ID=XLOC_011692|Name=XLOC_011692|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3891bp|location=Sequence derived from alignment at sc0000285_pilon:170220..174110+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGGAATACACAGGAAAATGTGGAGTCAGAGaaaaaaaGACACGAATTGT
TGGAGGAACAACAGCTAAACCAGGGGAATGGCCTTGGCAGGTAAGTttta
cccccgggggggggggtactagggttgcaagctgacgggggaggggggtg
ccgcccgactttcgaactttggacccttaccgggactaaaaaggagaaaa
caaaggaaaattttgggaattttacgacccttagcgggactaatttgacc
aattttgaccaaatttcgatctttcagggggtaaaaagttgaaattttcc
tatttttccgacccttacggggactgaaatttgattttctgatttttccg
acccttagcgggactttggaagtccaaaaaaggtacccttaagggcggca
cataccgtaccctccatttgcctaagtacccccccccccccccccccccc
gttttacCATACCTGCATCAGTAAAGTAAAAGATACCTCCAGATCGTACC
TCCTGATCTGAATGAACTGAATTTAAAAAGGACTGAAATTTTCAAGCTCG
AACATTTTCATTATTCTAATAGCGCAAGACAGATaccacgtccatcagta
aaatcaaaaagtggtggaAGTGGCTTTGGTTACGAGATTGTGAAATTCCa
taatgttttatatttttccagtaTAGAAAACCAAGGGGTGGCCAATTCTA
TTTCTTCCTTTCAGTTTTGTTACAATGTGTGCACATAACTTTAACTTCTA
TAGCTATATAAATGTATACAAAAGAGTGTTAACTTGCTACTTGTCTCTCC
CTCAGGTCAAAGTTGGAGGGTGCGGTGGCACTCTTGTTTCTGATCAATTT
GTGGTGACAGCGGCTCATTGTTTCGATCGCAGCAAAGATCCTGACGACTA
TAAAGTTACTGCAGGTAACCCatctggcacataacgttgtttcaacgttc
acctaacgttatatggacgttgtgaacacaacgttgtatgccagctggga
aggCTCTTCGTTTATTTTGTTCTTCCACAGCCGTCAAAGGATTGAGAGCT
TCTCTGTAGCAAAGCATCGTGACTTACGTTAATATAAACTTACATAAATC
TATcgtaaaatagaaaacaaaatgacAGATTTTAGTCTACTAGATTTGAG
TGACGTAACAAGCAATTTTGGggacaatatttttgaaaaaaagacttttg
acaaaattaattAACTTAGATATTAACCTCGATGATAATAAAGCTCCAGT
TCTGTGAATTTCAGAAGCTATTTCCAGTTTTACGATGCAGGTCACAAAAG
GAAATTAATGTAGAAAAGTCACaaaaaaaCAATCGGGTAAAACTATCTGA
TTGGCTGAGATAGAAAAATTACCTCATACTTCAGACATTTTGAAAAGCGT
ATGTTTATGTGAGCAATTTTCAGCTgtaattgacatttttttctgctaat
aggaaattcgTGTCTCGGTCTTTCACTAATTTTCCAAGCGCAGCGTCCGA
AATAATTGTTGTCATGCGTTAAGTTAGAAAAATTACGGTAGCCGATATTA
CATCAACTTTCTTTTTAGGTGAACATGACAAATACGAAAAGGAACAATGG
GAACAAAAAATGGAAATCGAAAAGATTATCATTCACCCAGCATATGGAAA
ACTTGTCTCTAATGATGCAGACATGGCCTTGCTtaaactgaagaagaaag
tcTCGTTTAACCAACGCGTTCGACACGCATGCGTAGCTGATGATTTTGTT
GATATTGGTTTAGATTCGGAATGTTGGGTGTCTGGTTGGGGCGCTCTTAA
ATTCAACGGGCGTTCTGCAAGGGTAATTCCTGACGAAATTATTAACTTTT
TATCACCGTACATAATTTTACCCtaatttcttttgtctttaCCATAAAAA
CCTTAGAAATCTTTTCAAGACGCGTGTTTAAAGAAAAGTGGTAATCAGAA
TATTTGCTTGAAACaagaatttcaaagattttgtatttgGGAACTAcagc
tttttttcaaaaattgatcaTTGAGGAAAACTtatgtaagaaaaaactat
tgaaaatgtCCAAAGATGATGATAAACTGAGGATTGAATGAAGCAAGATC
CAATCCAATTCTGGACTTTTACTTGTCTTGCTTATATGAAGACAAATAAC
ATGTTTTTTCTAacataagcataacgtttataagcatacacaaACTCAGT
TTTTTGTacgaaatacatgtttttttcttttataagcatacgcaggctca
gtttttggtacccaAACAATGGATCTATTGTTTAAGAAGAATAGAATGCT
AAAGCATAATgtgagcctgatataggggcaAATACTTgcctataaaaaaa
acatgtagcacATTTTGGAACAGTGGGTTTAACATATCAAGACAAAAATA
GGCGCAGTTGCAActtctctttatttttttaagtatttGCAACAAGCAAA
ATTACCGTTGATCGATCCCAAAGAATGTGTTGCTACCATGGGTTACCGAA
GTATCACTGATAACATGTTATGTGCAGGCTTCAAAGATGGCACTAAAGAT
TCTTGCCAAGGTTATTATTTATATATACACCCCAGCCTGCACACTACGTT
CTTTTAAcgtctatctaacgttcacaacgtccatataatgttagataaac
gttgaaataacgttgtgtaccagctgggaaccctacacccttgtctcaca
gccccggtggaactttttcctcagtggggataagaaTTCCTATTTAAATC
TCAAAGGCAATAGAAATTTCATTGTTCCAAGGTGAGAGCTCTACTGAGAG
CTATTTGGGTCCCTTAGAACTGAAAGGGGGGCACATAGTGCCCCCCGTGG
ATAACTTAGGATAGGAACATTAtttggtcatgaaatttggtactgCAATG
CTTAAACCTATAAcaaacaaatttatcaaaaaatatttttgaaaattgaa
tgcaatttttgatgacgtcatcaattgtatcaacaattggcaaaaatcac
ccaaaagactcaaaaaaaaagatgtttcttaaaattgctATTGAAACGGA
TGGAGAAACACATTCTCcttcattttgcttttatttggAAGCTTTTACAA
TGCAgtaaatgaaaattaaattctaaatcAACAATTTTGTCGTGACGTTC
TACTATAGCGCGCCAAAaccgaagaaaatgttttcaactttcaaaaccac
gtaaaatcagaacatttcaactttttcaagttGGTGATactttttttgtc
atatttatatttatttgttGCTGCTAATTCTCCTGTAAGATGAAATAGAA
GCAATACAAATGAAATGGACAATTAAAGTTTACTTGGTAACATGTTATAG
TATCTTGGAGTAAGCacataaaaaagagcaaaatagcCTGCGCTGCAATT
GTGCGATGGTAGTGGTCACCGACAAACCTGTCATTGGGACTAAAATAATT
Gaccaatgaaataattttttgaaccaaaacattccccataaaattcgatg
aaaagtcataaaatttcagctttatagATAGCCTCACTAGTTAAAAAATG
CTAGCCAATTTTCTATCAGTAGGTAGGGTTAAGTGGTTAAGTGGTTGGTG
ATGGCTTCGgagtacaattttcaaacattggattttgaatggggatgaaa
tcttGAATTAAAGAAGATAGTTAGATATACCTAGCATTCTATCATCCCCA
TTATTTTTTCAGGTGATTCTGGCGGTCCTTTAGTTTGTCGGAAACAAGAT
GCAGTGACTGGTGAATCGCAATGGTATCTGTGGGGAGTTGTTTCATGGGG
TTATGGTTGTGCAACTCAACGTTATTACGGGGTCTATACAAAAGCTCACA
ATTTCCGACACTGGATTGCAGATGTGATGAgaagatattaa Coding sequence (CDS) from alignment at sc0000285_pilon:170220..174110+ >XLOC_011692 ID=XLOC_011692|Name=XLOC_011692|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000285_pilon:170220..174110+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGGAATACACAGGAAAATGTGGAGTCAGAGaaaaaaaGACACGAATTGT
TGGAGGAACAACAGCTAAACCAGGGGAATGGCCTTGGCAGGAGGAATACA
CAGGAAAATGTGGAGTCAGAGaaaaaaaGACACGAATTGTTGGAGGAACA
ACAGCTAAACCAGGGGAATGGCCTTGGCAGGTCAAAGTTGGAGGGTGCGG
TGGCACTCTTGTTTCTGATCAATTTGTGGTGACAGCGGCTCATTGTTTCG
ATCGCAGCAAAGATCCTGACGACTATAAAGTTACTGCAGGTCAAAGTTGG
AGGGTGCGGTGGCACTCTTGTTTCTGATCAATTTGTGGTGACAGCGGCTC
ATTGTTTCGATCGCAGCAAAGATCCTGACGACTATAAAGTTACTGCAGGT
GAACATGACAAATACGAAAAGGAACAATGGGAACAAAAAATGGAAATCGA
AAAGATTATCATTCACCCAGCATATGGAAAACTTGTCTCTAATGATGCAG
ACATGGCCTTGCTtaaactgaagaagaaagtcTCGTTTAACCAACGCGTT
CGACACGCATGCGTAGCTGATGATTTTGTTGATATTGGTTTAGATTCGGA
ATGTTGGGTGTCTGGTTGGGGCGCTCTTAAATTCAACGGGCGTTCTGCAA
GGGTGAACATGACAAATACGAAAAGGAACAATGGGAACAAAAAATGGAAA
TCGAAAAGATTATCATTCACCCAGCATATGGAAAACTTGTCTCTAATGAT
GCAGACATGGCCTTGCTtaaactgaagaagaaagtcTCGTTTAACCAACG
CGTTCGACACGCATGCGTAGCTGATGATTTTGTTGATATTGGTTTAGATT
CGGAATGTTGGGTGTCTGGTTGGGGCGCTCTTAAATTCAACGGGCGTTCT
GCAAGGtatttGCAACAAGCAAAATTACCGTTGATCGATCCCAAAGAATG
TGTTGCTACCATGGGTTACCGAAGTATCACTGATAACATGTTATGTGCAG
GCTTCAAAGATGGCACTAAAGATTCTTGCCAAGtatttGCAACAAGCAAA
ATTACCGTTGATCGATCCCAAAGAATGTGTTGCTACCATGGGTTACCGAA
GTATCACTGATAACATGTTATGTGCAGGCTTCAAAGATGGCACTAAAGAT
TCTTGCCAAGGTGATTCTGGCGGTCCTTTAGTTTGTCGGAAACAAGATGC
AGTGACTGGTGAATCGCAATGGTATCTGTGGGGAGTTGTTTCATGGGGTT
ATGGTTGTGCAACTCAACGTTATTACGGGGTCTATACAAAAGCTCACAAT
TTCCGACACTGGATTGCAGATGTGATGAgaagatattaaGTGATTCTGGC
GGTCCTTTAGTTTGTCGGAAACAAGATGCAGTGACTGGTGAATCGCAATG
GTATCTGTGGGGAGTTGTTTCATGGGGTTATGGTTGTGCAACTCAACGTT
ATTACGGGGTCTATACAAAAGCTCACAATTTCCGACACTGGATTGCAGAT
GTGATGAgaagatattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000285_pilon | genome | sc0000285_pilon:170220..174110 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-759:3715 |
| Aaloc | 454-579:2434 |
| Aaloc | 202-453:1571 |
| Aaloc | 91-198:806 |
| Aaloc | 1-90:1 |
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