XLOC_011487 (mRNA) -

Overview
NameXLOC_011487
Unique NameXLOC_011487
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:353796..354350-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011487 ID=XLOC_011487|Name=XLOC_011487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=555bp|location=Sequence derived from alignment at sc0000159_pilon:353796..354350- (Clytia hemisphaerica_ch_hm2_pilon)
GGTGCTACTACAAGCCCCGCTGACAGTACCACATCAAGCGGCACGCGAAC TACTACAAATGCTGTTGCTTCTGCAAGCATCACTACCGATGCTACTCCTG GACCAAGTACCTCACCAAGCAGCACAACTAGCACACAAGTTCCAGCTTCT ACAACTGCTGCTGCTTCTGCAAGCATCACCACAAATACTACTGCTGATAA TGCAACTGCAAATGCCAAAATTAAGGTAGTGAAAACCACTGCAGATCCAA AGATAAAATTGAGTAAAAAACTAAACGATTTCTTAGTCTATAGAGGGATT GACGTAAGCGACCTAAGAAGCATTCCTGACGATTTTCCTCTCGGTCAAGA ATCACATCAGCCAAAGATTTTAAAAATTCGATTTACACAACGAAGTAATG GTAACGCAAATCCCACGCCAAAATTGCAAGCAAACGACGGTGTGAACGAA GCAGCCCCTAGTACCAAAAATGATGCGGGACAAGAAGATGAAGACACAAG TAATCAAACGAACGAAGATAATGGTGAAGACAACCTTTGTAACGATTTTG ATCAG

Coding sequence (CDS) from alignment at sc0000159_pilon:353796..354350-

>XLOC_011487 ID=XLOC_011487|Name=XLOC_011487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1110bp|location=Sequence derived from alignment at sc0000159_pilon:353796..354350- (Clytia hemisphaerica_ch_hm2_pilon)
GGTGCTACTACAAGCCCCGCTGACAGTACCACATCAAGCGGCACGCGAAC
TACTACAAATGCTGTTGCTTCTGCAAGCATCACTACCGATGCTACTCCTG
GACCAAGTACCTCACCAAGCAGCACAACTAGCACACAAGTTCCAGCTTCT
ACAACTGCTGCTGCTTCTGCAAGCATCACCACAAATACTACTGCTGATAA
TGCAACTGCAAATGCCAAAATTAAGGTAGTGAAAACCACTGCAGATCCAA
AGATAAAATTGAGTAAAAAACTAAACGATTTCTTAGTCTATAGAGGGATT
GACGTAAGCGACCTAAGAAGCATTCCTGACGATTTTCCTCTCGGTCAAGA
ATCACATCAGCCAAAGATTTTAAAAATTCGATTTACACAACGAAGTAATG
GTAACGCAAATCCCACGCCAAAATTGCAAGCAAACGACGGTGTGAACGAA
GCAGCCCCTAGTACCAAAAATGATGCGGGACAAGAAGATGAAGACACAAG
TAATCAAACGAACGAAGATAATGGTGAAGACAACCTTTGTAACGATTTTG
ATCAGGGTGCTACTACAAGCCCCGCTGACAGTACCACATCAAGCGGCACG
CGAACTACTACAAATGCTGTTGCTTCTGCAAGCATCACTACCGATGCTAC
TCCTGGACCAAGTACCTCACCAAGCAGCACAACTAGCACACAAGTTCCAG
CTTCTACAACTGCTGCTGCTTCTGCAAGCATCACCACAAATACTACTGCT
GATAATGCAACTGCAAATGCCAAAATTAAGGTAGTGAAAACCACTGCAGA
TCCAAAGATAAAATTGAGTAAAAAACTAAACGATTTCTTAGTCTATAGAG
GGATTGACGTAAGCGACCTAAGAAGCATTCCTGACGATTTTCCTCTCGGT
CAAGAATCACATCAGCCAAAGATTTTAAAAATTCGATTTACACAACGAAG
TAATGGTAACGCAAATCCCACGCCAAAATTGCAAGCAAACGACGGTGTGA
ACGAAGCAGCCCCTAGTACCAAAAATGATGCGGGACAAGAAGATGAAGAC
ACAAGTAATCAAACGAACGAAGATAATGGTGAAGACAACCTTTGTAACGA
TTTTGATCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011487XLOC_011487-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:353796..354350 -
Properties
Property NameValue
Aaloc1873-1884:13
Aaloc1816-1872:73
Aaloc1630-1815:262
Aaloc1597-1623:289
Aaloc1579-1596:310
Aaloc1543-1575:343
Aaloc1495-1530:379
Aaloc1387-1494:490
Aaloc1324-1386:556