XLOC_011028 (mRNA) -

Overview
NameXLOC_011028
Unique NameXLOC_011028
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000311_pilon:295127..296128+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011028 ID=XLOC_011028|Name=XLOC_011028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1002bp|location=Sequence derived from alignment at sc0000311_pilon:295127..296128+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacgaAGTCCCGAATTATTCGTTTTGCAGTCATGCTACCGAAGGATAA AGCGCGAAAGATCCGCATTCCAGAGCGGATTGAGAGTTTATGTCAACAAG AGGGAATTGAAGTCACCACCATCGATGCTTTCAAGTTGAAGGAGGACAAA ATTGAAGCTAATTTCGATATCGTGCTGcacaaaatttttgattatttcaa cGAGCCTGAACTAACAGTTGAGCAGATGCAGGATGTCATCCAAAACTGTA AAGACTTTTTTGAACAGAATCCCAAAATGATTGTTCTTGATGATACAGAA AAATATCGGAAATGCACGGATCGCCTTTATTGTACGCGAATAATGCGTGA ATGCAGTCTGTTCGTTGATGGTATTCAGGTGTTTGTACCCAAGTCCCTCG AGATTGCTGCCGGTCTTCCATCCGACCAAGTTCGTGACATGTTAAGTGAA GCCAAAATAAACTTCCCAATCTTAGTTAAGCCCATGTATACAAGTGATCG AAAAATGTCGCTGGTTTTTAGTCTGGACGATGTGAATGAAAAATGTTCAC CCAGTCTAGTTCAAGAGTTTTATAATCACAATGATGTCATGTATAAAGTT TTCGTCATGAACAACCGTTACAATGTTATTCAACGCCCTTCAATTAAAAA CTACGAAAAGGACCCACATCAAAAACCGATTTTCCTCGATTCGAGAGATG TCTCGAAAATGGGGCGAGGTTTTCATCCGGAGATACATAAATCGGACCCT TCAAAGCAGACGTGGCAGAGTAGTTTTAGTAATCcagatattttgaataa atctgTGCTCAATTCACTCTGTGTAAAACTACGTGATGCTTCCGGACTTA AAATGTTCGGCTTTGATCTCTTAGTTGTGCGAGAGACAGGTCACTATGCT ATAGTCGATCTTAATCCGTTCCCTGGTTTCAAAGGGATACCGGATGATGT CTTTGCAGATGATTTTGTTCAAATGCTGAAagatttagttttttctaaat ga

Coding sequence (CDS) from alignment at sc0000311_pilon:295127..296128+

>XLOC_011028 ID=XLOC_011028|Name=XLOC_011028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2004bp|location=Sequence derived from alignment at sc0000311_pilon:295127..296128+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacgaAGTCCCGAATTATTCGTTTTGCAGTCATGCTACCGAAGGATAA
AGCGCGAAAGATCCGCATTCCAGAGCGGATTGAGAGTTTATGTCAACAAG
AGGGAATTGAAGTCACCACCATCGATGCTTTCAAGTTGAAGGAGGACAAA
ATTGAAGCTAATTTCGATATCGTGCTGcacaaaatttttgattatttcaa
cGAGCCTGAACTAACAGTTGAGCAGATGCAGGATGTCATCCAAAACTGTA
AAGACTTTTTTGAACAGAATCCCAAAATGATTGTTCTTGATGATACAGAA
AAATATCGGAAATGCACGGATCGCCTTTATTGTACGCGAATAATGCGTGA
ATGCAGTCTGTTCGTTGATGGTATTCAGGTGTTTGTACCCAAGTCCCTCG
AGATTGCTGCCGGTCTTCCATCCGACCAAGTTCGTGACATGTTAAGTGAA
GCCAAAATAAACTTCCCAATCTTAGTTAAGCCCATGTATACAAGTGATCG
AAAAATGTCGCTGGTTTTTAGTCTGGACGATGTGAATGAAAAATGTTCAC
CCAGTCTAGTTCAAGAGTTTTATAATCACAATGATGTCATGTATAAAGTT
TTCGTCATGAACAACCGTTACAATGTTATTCAACGCCCTTCAATTAAAAA
CTACGAAAAGGACCCACATCAAAAACCGATTTTCCTCGATTCGAGAGATG
TCTCGAAAATGGGGCGAGGTTTTCATCCGGAGATACATAAATCGGACCCT
TCAAAGCAGACGTGGCAGAGTAGTTTTAGTAATCcagatattttgaataa
atctgTGCTCAATTCACTCTGTGTAAAACTACGTGATGCTTCCGGACTTA
AAATGTTCGGCTTTGATCTCTTAGTTGTGCGAGAGACAGGTCACTATGCT
ATAGTCGATCTTAATCCGTTCCCTGGTTTCAAAGGGATACCGGATGATGT
CTTTGCAGATGATTTTGTTCAAATGCTGAAagatttagttttttctaaat
gaatgacgaAGTCCCGAATTATTCGTTTTGCAGTCATGCTACCGAAGGAT
AAAGCGCGAAAGATCCGCATTCCAGAGCGGATTGAGAGTTTATGTCAACA
AGAGGGAATTGAAGTCACCACCATCGATGCTTTCAAGTTGAAGGAGGACA
AAATTGAAGCTAATTTCGATATCGTGCTGcacaaaatttttgattatttc
aacGAGCCTGAACTAACAGTTGAGCAGATGCAGGATGTCATCCAAAACTG
TAAAGACTTTTTTGAACAGAATCCCAAAATGATTGTTCTTGATGATACAG
AAAAATATCGGAAATGCACGGATCGCCTTTATTGTACGCGAATAATGCGT
GAATGCAGTCTGTTCGTTGATGGTATTCAGGTGTTTGTACCCAAGTCCCT
CGAGATTGCTGCCGGTCTTCCATCCGACCAAGTTCGTGACATGTTAAGTG
AAGCCAAAATAAACTTCCCAATCTTAGTTAAGCCCATGTATACAAGTGAT
CGAAAAATGTCGCTGGTTTTTAGTCTGGACGATGTGAATGAAAAATGTTC
ACCCAGTCTAGTTCAAGAGTTTTATAATCACAATGATGTCATGTATAAAG
TTTTCGTCATGAACAACCGTTACAATGTTATTCAACGCCCTTCAATTAAA
AACTACGAAAAGGACCCACATCAAAAACCGATTTTCCTCGATTCGAGAGA
TGTCTCGAAAATGGGGCGAGGTTTTCATCCGGAGATACATAAATCGGACC
CTTCAAAGCAGACGTGGCAGAGTAGTTTTAGTAATCcagatattttgaat
aaatctgTGCTCAATTCACTCTGTGTAAAACTACGTGATGCTTCCGGACT
TAAAATGTTCGGCTTTGATCTCTTAGTTGTGCGAGAGACAGGTCACTATG
CTATAGTCGATCTTAATCCGTTCCCTGGTTTCAAAGGGATACCGGATGAT
GTCTTTGCAGATGATTTTGTTCAAATGCTGAAagatttagttttttctaa
atga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011028XLOC_011028-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000311_pilongenomesc0000311_pilon:295127..296128 +
Properties
Property NameValue
Aaloc1-1002:1