XLOC_010908 (mRNA) -

Overview
NameXLOC_010908
Unique NameXLOC_010908
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000063_pilon:1109440..1110961+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010908 ID=XLOC_010908|Name=XLOC_010908|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1522bp|location=Sequence derived from alignment at sc0000063_pilon:1109440..1110961+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAAGTGCTGACTACCGGGAGGAAGATTTCTACCGAAAATGTTCATGTGA ATATTCAACCCATTTCTCTACAACCATGTTTGTGTACAAAGGCGCTTTAT TGATCCTGGGAAGTTTTTTAGCTTGGGAAACAAAGCGTGTGAGAGTTGCA GCCCTTAATGATTCGCAATTTATTGGTGAGTTTTCCTATTGCACAAATAA GCCTCCGTTTACGTCACCGCGTTCCTTTAACGTTTATTTGACGTTTTATG GCCGTCATTTCGACGTTTCATGAACTACTGTGGAGCCTTCATAATCCAAA AATCATACCAGAGCGATACGAAACCGTTATCTCTGAGCATGGTCTTAGAG TattctttcattattttcagGAATGGCAGTATacaatgtttttattgttt ccGTGACAACCCTTATCGTCTATTACGcaatcgaaaatttcaaaacgTAC TACTATCAAGCTTACGTCGTTGTTGCGGCTGCCATTTTGATTTGCAGTAA TGTTACTGTTATACTTGTGTTTGTTCCCAAGGTAACTAAAAGTttccata ttattattatttataccCCCGTATATAAACAACAACAGTGAACTTACACA AACTtccattattcgaatttttctgtaattcgaacccAGTCTTCGTCAAG GAGAAAACCTCTtgaaatactctctataattcgaatctcgctgtaattcg aacaaataagattctccgttcgagttcgaaatAAGTAAGAGTCAACTTTA TAGTCTTGCCCACGCAATTAAGCCTGAGTCTTGTGTACCTAATATTACAA AAGACTGTCTTAAGCTTGTGCTTGAAGCTTTGGTACTTGATGCAAATTAA CCTTAAATCGTAATTATttactaccttaagtggataaattttggcgggga ttaaatttggcgaatttgccAATTTTGAATAGACTTTTCAAATTCGGCAA ctcaccaaattaaatccccgccaaatttaacaaaaagggaattatgtgaa aaatcacagctttttagtatattttgagtaattttcacccatttcagtgt gacaaaattcaaaattcgccaaattaaattcccgccaagaATCGTTTCTT GGTTTAAATCCacaccaaaatttatccacttaaggtatataAGTAAGGTA TTatcatattttaaaatttatattaccaaattaaattcccgccataATTT CTTCCTTTAGGAAAAACAATTACACAACTTTTTAAGaattgtttcttctt ttcagcTCATCTTACTATTTGGCCGTAACAAAACATTGGCAAGAGCTTTA TCCGTTCAAACCTTCTCTTTCTCCTCTTCATCGAAAGATCAACACAGCGG CTCGACCAATCATCTTAATTCTTACGGCggttcgaccaatcaaatcaatt cACAAGGTCTTTCCACCAATAGGATGAGCGTTCGAAATGGATCGACCAAT AGGATTCATCATACAGATTCGAACAATAGCAGCAATGTTGTTTATAATCG GTACGCCGACGAGAAGAAATGA

Coding sequence (CDS) from alignment at sc0000063_pilon:1109440..1110961+

>XLOC_010908 ID=XLOC_010908|Name=XLOC_010908|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000063_pilon:1109440..1110961+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAAGTGCTGACTACCGGGAGGAAGATTTCTACCGAAAATGTTCATGTGA
ATATTCAACCCATTTCTCTACAACCATGTTTGTGTACAAAGGCGCTTTAT
TGATCCTGGGAAGTTTTTTAGCTTGGGAAACAAAGCGTGTGAGAGTTGCA
GCCCTTAATGATTCGCAATTTATTGCTAAGTGCTGACTACCGGGAGGAAG
ATTTCTACCGAAAATGTTCATGTGAATATTCAACCCATTTCTCTACAACC
ATGTTTGTGTACAAAGGCGCTTTATTGATCCTGGGAAGTTTTTTAGCTTG
GGAAACAAAGCGTGTGAGAGTTGCAGCCCTTAATGATTCGCAATTTATTG
GAATGGCAGTATacaatgtttttattgtttccGTGACAACCCTTATCGTC
TATTACGcaatcgaaaatttcaaaacgTACTACTATCAAGCTTACGTCGT
TGTTGCGGCTGCCATTTTGATTTGCAGTAATGTTACTGTTATACTTGTGT
TTGTTCCCAAGGAATGGCAGTATacaatgtttttattgtttccGTGACAA
CCCTTATCGTCTATTACGcaatcgaaaatttcaaaacgTACTACTATCAA
GCTTACGTCGTTGTTGCGGCTGCCATTTTGATTTGCAGTAATGTTACTGT
TATACTTGTGTTTGTTCCCAAGcTCATCTTACTATTTGGCCGTAACAAAA
CATTGGCAAGAGCTTTATCCGTTCAAACCTTCTCTTTCTCCTCTTCATCG
AAAGATCAACACAGCGGCTCGACCAATCATCTTAATTCTTACGGCggttc
gaccaatcaaatcaattcACAAGGTCTTTCCACCAATAGGATGAGCGTTC
GAAATGGATCGACCAATAGGATTCATCATACAGATTCGAACAATAGCAGC
AATGTTGTTTATAATCGGTACGCCGACGAGAAGAAATGAcTCATCTTACT
ATTTGGCCGTAACAAAACATTGGCAAGAGCTTTATCCGTTCAAACCTTCT
CTTTCTCCTCTTCATCGAAAGATCAACACAGCGGCTCGACCAATCATCTT
AATTCTTACGGCggttcgaccaatcaaatcaattcACAAGGTCTTTCCAC
CAATAGGATGAGCGTTCGAAATGGATCGACCAATAGGATTCATCATACAG
ATTCGAACAATAGCAGCAATGTTGTTTATAATCGGTACGCCGACGAGAAG
AAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_010908XLOC_010908-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063_pilongenomesc0000063_pilon:1109440..1110961 +
Properties
Property NameValue
Aaloc337-603:1256
Aaloc178-336:373
Aaloc1-174:1