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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1780842..1785431- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010854 ID=XLOC_010854|Name=XLOC_010854|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4590bp|location=Sequence derived from alignment at sc0000049_pilon:1780842..1785431- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGGAAATGGTTCTACTTGTACAGACATTAATGAGGTGAGTTTACA
TTGCATTTAAATTATTTCCAATATTCTCATGAAGTAGAATGTTTAACCAT
TCATAAAATTCTTTCTCACAGAGACCCGTTGAGTACCCCTCCATCTGGAA
AAAATTGCCCAAAATAACGTCCTCTGTGGAAAATTTAACTCTAACTGAAT
CCCACTGAATTTGCAAAATTTGTATGATGGAATTCAAATCCCCAGCTCCC
AAAAACATAGGAATACCAATCCCAATTAAATTTTAGTCTGTCTTTTTTCT
CTCCACTGGCTAAAAAAGTCTTACCAGGTATGTTCACGGCGATCTGTAAC
CGGATTAATCAGATTCAAAATTTTTGGTTTTGGCCAAATTTTGAAAAAAT
GGCTGAGAAGAGCACATTCTCTCAAAAATTTTAGCTTTTTCCAATCCTGA
ATTATTATTTTTTCCGATTTTATTCCACCCGGGATGAGGAAGGGATAGAG
GGGTCTCTCGAAAACGAAAGTGTCCTGGTACCTGGTGAATGTATCAAAAA
CTTCTTTCTTCTACTTTTGCCTTGTTATGAGATGACTTTGTGTGCAAAAG
TTCATCTCCATATGGACACTAATTTTGGAGATTCAGGGGAAACTATAGCC
GAAATAATCCCGATTTTTTTAAAGTTCCAGAGAAAGATCATCGTGGTTAG
AATTGGGTGTTTCTTAGCGTGTGACAATATTTCATTTTCTCTCTTTTCAG
TGTTTAGAGAACCCTTGCTCTCCATTGACCAAATGTGAAAACAGGCTTCC
TGGCTATGTATGTCACCAATGTCCATCAGGCTATAAAGGTGAACAACTTG
TTGGCATTGGGAGAGAACATGCAAGATTGAAGAAACAGGTAGCCAGTCTA
TTAACCCTATATCACAGAGCCACTGCGAGACCAGCCCTGCTGGAAAATGT
GACAAAAAGTACGTCTCCGGTGGGAAAATACCCTGGAATTTCAGCCCAAA
TAGGAAATTGACTTTGATTTCATCCCTATTCGAAACTCAATGTATAAAAA
TTGCACTCCAAAACCATCCCCACTGGATTCTTTAACCGCTTGAAACAAAA
GAATTTTTATCCCCATTGGGATTTCAATTGGAAGTTTTATCCTAACTGAG
GAAAAAAGTTCCACCGAGGCTGTGATACAGAGGTGTTATTAACAACTTTT
GGCAATTCAAAAAGCCAATTCGCATTAGAAAGCGGTTTGGTGTTTGTTGA
AAAGATATTCAAGAGTAGAATATCATCAAAAAGAAAAATTGGAGGTTTTA
AACATTAGAAAAACGTTGAAACAATGTTTTTTGTAATCATTGTGGAGACA
ACATGTCAACGGAAGAATAACAGCAAACCCACTGTGTATGGAAGCTAGAT
GTAATTTCGCCTAATTATATTTAAGGTTTGCATAGATATTGATGAATGTT
TGGTTGGAACACACAAGTGTGATGACAACGCTATCTGCATCAACAAAAAG
GTAAAGTAGTCCTGGTCAGTGAAGCTTTAAGATTTGCATCGTTTTTGGCC
TCTTCGGGGCTTTAACCTCAATGGTCTATAGTACTGCTTACTCTAATCAA
GCCTTCGGTCATTGCCTCAGATTTTTCTTCGTGACAGGATGATGCGTAAG
ATTATATTTTAAAAAGCTCAAGCGATGTGATAGACGGCTCTGTACCAGCC
GCCGTGTGAATACTTTTTAAGTGTTGTTACATGTTTTTCTATATAAGAAC
ATCCAAAAGCCTCTTAACTTTTGTTCATAAATTTGTTCTCAACATGTTCT
TACTTTCACCATTATGTGAGCATTTTTGGCAATTTTTCTAAATAGTTGTT
TTAGAGTCCACAAAGCCTTAAAATGTTCTTAACTTGTTCTTAATATTTTT
GTCATCGAATCATTATGTTCTTTAAGAAGGGACATCCGACAATTCTCTTT
ATTTTCAACACTTAACAAAGTATTTAGAATAACACCACTTAAAAAAGTAT
CTACACAACGGCTGGTGCAGAACTGGTTGTCTCATAACCATACCAATTAG
TAAAATCTTATTTATTTTTGAACCATCAGGGATCATATGAGTGTGGGCCA
TGTAGATCTGGATATCGGAAAGGTATTGATAGCAATTGTGTACATTTGGA
GATTTGCAGAGGACGGCCAGGATCACCAAGTAACCCATGCTCAAAATACG
CCACTTGTCATCCCATTTCTGGAGGAGCTCTCTGCAAGGTGTAATATTAT
TTGATTGAAAATGTTCAATACACCTTTTCGATCATAGCTGCTAATTTCCG
AGCGGGTATTTTTTGTCCGTTTTACCACCATAAAACCGTCCAAATCTCTT
TTTGGCTAATCGCCAAATTAAATCCACGCTAAAATTAAATCCACTTAAAC
CTTCAAACCGGGCAAATGTCTATACAAGTTTTTAATTCGCCAATATACCG
AGTCTCAGACTTAAGAGGATAACTCCTGACCACTTGATTATAAAAAGATT
ATAAAAATACCTTTTTAATGGTACCAAAACCATTGTCTAACTCTCAAGTT
ACAAACTGGATGTTGCGCGCTGCAAAGGTAAAGGCAATGAGACTTCTTTC
TTGGCAATTTCAGTGTCGACCATCAATGGCTGGAGATGGATATCATTGCG
GTAAAGATACTGACGGAGATGGGATCCCTGACCAACAACTCCAATGTGAT
TCAAAGCATTGTCAAAAGGTAACATTGGGCTCTTCCAGAAAAAATCCGTT
CATGGGGGGTGGAGGATGAATTGTCACAGGGGTATTGAAAAAATACCAAA
AAATTGCAATGTCCAGGGGGTAAATTCCAATGTCCAGGGGTTGATTTGAT
GTTTGTCCAGGGGTATAACCCGTGTCCAGGGGGTTAAAAATCAAAATGTC
CAGGGGTAATTCATGAAAAAAAATAAATATATCCTCCACCCCCCATGAAC
GGATTTTTTCTGGAAGAGCCCATTTTAGTATTAAAAAGATCTAGTGTAAA
AGTTTTTCAAGGCAAAGACTGATTGGTTAAGCGTTGAAATTTTACTGTAA
TGTCACGAGACCAAGGTAGAATTTCCTACCTAACCACGGCACACTTTTCA
GCAAAAGCACGACATAGCCCTTCGTGCTTTATAAATCTGTTGAATCAACA
ATATTGGTAAAAGATGTTTTAGTGAGTTTATGCATCGAGTTTTTTCTATG
GAAGAGACTGTCCGATTATCCATTGAGTGGCATGAAACTTTGCTTCAATA
ATGATGGAAAAACAGAATTGCAGTGCAATTTGGAATTTTGTCAAAAGGTT
TAAAATCACTGTAAAAGTATATCTTTTTTACGATTATGCAGGCTTCAACA
CGCGTCAATCTTGTTGTCTTGCCAGGCAAAATCTTCCGATATTGAAAATC
TGTGATTCTTTTTCGATTAAGATTCTGTGTGTTGGTCGACAAAATTAGAG
TGGGTAAGAACTGTGTGAATATCAGCGATGTTTCTTATCTATTGAAGGAT
AATTGCATGAACACACCGAACAGTGGGCAATCAGACCTGGATGACGACGG
TAAAGGTGATGCGTGTGACACTGATCTAGATGGCGATGGTATTTATAATC
AAGTGGTAAGTTTAGTCTATGGTTAGCTAGAGAGCTTCTGACTACGGGTA
TAATCGAAAAAAGAGGTCAAAATATCCAAGAAGCAACGAAACCATATCTT
TTTCCATAACAACAATTCAAGGAAAAAATCATTTCTCACCTCTTGTTTTC
TTCTTAACCGTCAAACTAAAAAGATGCCACCGTCAATTTTTAACGTCTAC
ATCTCTTGTCTAAAACATCCAGGTGAAATGGAGTTTTCATAAGATATTTT
AATAATTGGGTCATCATTTGAAGTAATAAAAATGATGCGTTCTTTAGAAA
TTGTTTTATTACTGGTTAACGGGGTCCCCGCAGCGGTTTGCGTGAATGCG
TGAATGCGTGAATGGGCATTTTCGATTGCGTGAATGTGTGAAAATTGAAA
AAAAATGCGAGAATGCTTGAATTGAAAAAACTTGCGTGAACGTGAAAATC
CCCTTTTTGATTGCGGGAATGCATGAATGTGGGCTATTTTGTGCGTGAAT
ACGTGAATTTTTCCTTTTTTCCACCGATTATGTGCAGTTTTCCCAATTTT
CCAATGTTTCCTCGATTTTTGCCAAAAATTTTCCGATTTTCTGAAAAATC
GGTTTATTGCGTGAAACTGGAGGAAAATTTGCGTGAATGCGTGAATTTCG
AAAAAAAATTGCGTGAATTGAGGGTCCGCTGGGGGGCCTCGTTAGCGACC
AACCAAATCAAAGAAGAGCTTGTAAAAACTCCATCGCGTTCCAAAACATC
CTATGTATTATTAACAATACTATTTTTTCAAATTCATAATTATCAGGGTG
GAGAGCTGCGCTTCAGGCTTATGTTCCATACAAATTATAATTTTCATGTT
TCTAGGACAATTGTCCACGTCATTCGAATCATGATCAATCGAATAGTGAT
AATGACAAAATAGGGGACGCCTGTGATAATTGTTTGTTTACAAAGAATAA
CGATCAACAGGATGTCGATGGAGATGGGATCGGTGATGCT Coding sequence (CDS) from alignment at sc0000049_pilon:1780842..1785431- >XLOC_010854 ID=XLOC_010854|Name=XLOC_010854|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000049_pilon:1780842..1785431- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGGAAATGGTTCTACTTGTACAGACATTAATGAGATGGAAGGAAA
TGGTTCTACTTGTACAGACATTAATGAGTGTTTAGAGAACCCTTGCTCTC
CATTGACCAAATGTGAAAACAGGCTTCCTGGCTATGTATGTCACCAATGT
CCATCAGGCTATAAAGGTGAACAACTTGTTGGCATTGGGAGAGAACATGC
AAGATTGAAGAAACAGTGTTTAGAGAACCCTTGCTCTCCATTGACCAAAT
GTGAAAACAGGCTTCCTGGCTATGTATGTCACCAATGTCCATCAGGCTAT
AAAGGTGAACAACTTGTTGGCATTGGGAGAGAACATGCAAGATTGAAGAA
ACAGGTTTGCATAGATATTGATGAATGTTTGGTTGGAACACACAAGTGTG
ATGACAACGCTATCTGCATCAACAAAAAGGTTTGCATAGATATTGATGAA
TGTTTGGTTGGAACACACAAGTGTGATGACAACGCTATCTGCATCAACAA
AAAGGGATCATATGAGTGTGGGCCATGTAGATCTGGATATCGGAAAGGTA
TTGATAGCAATTGTGTACATTTGGAGATTTGCAGAGGACGGCCAGGATCA
CCAAGTAACCCATGCTCAAAATACGCCACTTGTCATCCCATTTCTGGAGG
AGCTCTCTGCAAGGGATCATATGAGTGTGGGCCATGTAGATCTGGATATC
GGAAAGGTATTGATAGCAATTGTGTACATTTGGAGATTTGCAGAGGACGG
CCAGGATCACCAAGTAACCCATGCTCAAAATACGCCACTTGTCATCCCAT
TTCTGGAGGAGCTCTCTGCAAGTGTCGACCATCAATGGCTGGAGATGGAT
ATCATTGCGGTAAAGATACTGACGGAGATGGGATCCCTGACCAACAACTC
CAATGTGATTCAAAGCATTGTCAAAAGTGTCGACCATCAATGGCTGGAGA
TGGATATCATTGCGGTAAAGATACTGACGGAGATGGGATCCCTGACCAAC
AACTCCAATGTGATTCAAAGCATTGTCAAAAGGATAATTGCATGAACACA
CCGAACAGTGGGCAATCAGACCTGGATGACGACGGTAAAGGTGATGCGTG
TGACACTGATCTAGATGGCGATGGTATTTATAATCAAGTGGATAATTGCA
TGAACACACCGAACAGTGGGCAATCAGACCTGGATGACGACGGTAAAGGT
GATGCGTGTGACACTGATCTAGATGGCGATGGTATTTATAATCAAGTGGA
CAATTGTCCACGTCATTCGAATCATGATCAATCGAATAGTGATAATGACA
AAATAGGGGACGCCTGTGATAATTGTTTGTTTACAAAGAATAACGATCAA
CAGGATGTCGATGGAGATGGGATCGGTGATGCTGACAATTGTCCACGTCA
TTCGAATCATGATCAATCGAATAGTGATAATGACAAAATAGGGGACGCCT
GTGATAATTGTTTGTTTACAAAGAATAACGATCAACAGGATGTCGATGGA
GATGGGATCGGTGATGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1780842..1785431 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-759:136 |
| Aaloc | 517-624:1094 |
| Aaloc | 412-516:1978 |
| Aaloc | 253-411:2512 |
| Aaloc | 178-252:3166 |
| Aaloc | 40-177:3841 |
| Aaloc | 1-39:4591 |
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