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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:455466..460503+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010039 ID=XLOC_010039|Name=XLOC_010039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5038bp|location=Sequence derived from alignment at sc0000238_pilon:455466..460503+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattcaaaatataaTATGGCAagtataaagaaaagaaaatcagaaGT
TAATAATGCTGAACCAGCCAGTAAAAAACCAAAGCAATCTTGGGTAAGTT
TTTTCTTGATCTACTGAACATAAAATTCACCATAAAAATGCGCAGAGGGT
TTCAAACTCTCGCCCAACTATATTTTATCCCACTTAAATACATAGCCATT
TCTTAACTTGTTAAATATTCTAGGACCAAAAGTGCATTTGaactcttttt
ggacctacctccgggtgccccggtggaggtcctataaattaacccatgtc
cgttcgttcgtccgttcgttcgtccgtccgtccgtctgttaccagctttt
ctcaggattggctcattagttttttctgattttttgcacaatgatgcaaa
atggcaatgcccagaacgtgacggagcccgatttttgagaaaaaatttat
ttgggcaaatttgggccaaaaactacctaaaaatagggttttttggactt
tgtgcaaaatcctgtcattactttttcctgattttttgtacaaagatgga
gggcaagattctctaaagaatggctgaagtggtttttcccggaaaattct
ttttcgccttaaaaaacggattttcgtattttggggaaattccctttaac
caaataagaaaatatagcttttaacaatgttgactcattatttttttctg
attttttgcacaattatgcaaaatggcaatgcctaaaatgtgtcggagcc
cgattttcgaaaaaaaatatatttgggcaaatttgggccaaaaactgcct
aaatatagggttttttggactttgtacaaaatcctgtcattacttttttc
tgattttttgtacaatgatggagggcaagattctctaaagaatggctgaa
gtggtttttcccggaaaatcctttttcgccttaaaaaacggattttcgta
ttttggggaaattccctttaaccaaataagaaaatatagcttttaacaat
gttgactcattatttttttctgattttttgcacaattatgcaaaatggca
atgcctaaaatgtgtcggagcccgattttcgaaaaaaaatatatttgggc
aaatttgggccaaaaactgcctaaatatagggttttttggactttgtaca
aaatcctgtcattacttttttctgattttttgtacaatgatggagggcaa
gattctctaaagaatggctgaagtggtttttcccggaaaatcctttttcg
ccttaaaaaacggattttcgtattttggggaaattccctttaaccaaata
agaaaatatagcttttaacaatgttgactcattatttttttctgattttt
tgcataatgatgcaaaatggcaatgcctaaaatgtgtcggagcccgattt
tcgaaaaaaaatatatttgggcaaatttgggccaaaaactgcctaaatat
agggttttttggactttgtacaaaatcctgtcattacttttttctgattt
tttgtacaatgatggagggcaagattctctaaagaatggctgaagtggtt
tttcccggaaaatcctttttcgccttaaaaaacggattttcgtattttgg
ggaaattccctttaaccaaataagaaaatatagcttttctcaaagttgac
tcattatttttttctgattttttgcacaatgatgcaaaatggtaatgcct
aaaatgtgacggagccagattttcgaaaaaaaatatatttgggcaaattt
ggaccaaaaactgcctaaaatagggttttttggactttgtgcaaaatcct
gttattacttttttctgattttttgtacaaagatggatggcaagattctc
taaagaatgactgaagtggtttttcccgggaaattcttattcgccttaaa
agacggattttcgtattttggggaaattccctttaaccaaataagaaaat
atagcttttctcaatgttgacttataatttttttctgattttttgcacaa
tgatgcaaaatggcaatgcccaaaatgtgacgaagccagatttttaagga
aaattattttgggcaaatttgggcaaaaaaaagcttaaaaggttttttgg
gcctgaatggttcaagtgattttcgtatttggggaaattcctttttacca
ttttacattattcaacacacaagctttatttttccattctgaatttttgt
acaattattgtcacttttttcttattttcatctaatgttaatcattaggt
aggtccattcagcatgttgcttgtttattttGCATTGCCTCTAAAAACTC
AAACCCACATTTTATTTAGAAAACTCCAACCACTATAAAACCTAACCCTA
ATATTAATAATGCGTTTCTTGAATATCTAGATCCCAATTGTGAATTGATT
TGATGTATGACAGTAAACAATGTCAGTCTGCAAACAAATCATATAACAGT
TTTTCTTGACTAGGACTCCTTTAGAGAATTCTAGGTTGATAATTCTGCTG
ATTCATAAATTTTCGAATTAAAGATAATTaatttatatatataatataaa
cttGGGAATTCCGCGTCAAAATAAGGGGTCGGAAGCACATCACACTTCTT
CAGTAAGCGTGGTTCTTGCATCTTGAAATGgacaaattttcaatgtttag
cttgtaaattatcaaaaaacacATAGTGAATTGCGAAATGTgatacgcta
attcgatccctgaaggtgttttctgatttctacctctgtttatagaaaga
ttttAAATTGTCTGCATCGGATATGGCAATTCTTCATGATCCAAGTAATC
CTACAGCTGATTTTTGGCCAACACGAGAAAAGACAATCACATTAGAAGAA
GCAAAGCTTGGAACTGATGGTAAAATCTTCTTAAAGATTTAATTTGCAGG
AATTAACTATGATGTCAACCTGCATATTGCTAAACTCTTAATATGAGTGC
CTCATAAAAGGAAAGAATTTCAATGGCTAGATAACCAAAAGAGCTTTAAG
GGGATTGCGTAGGCATCAGTATGTCTGGTAAAATTAGGATTGGTGGAAAT
TCTATTTGGCAGATGGGGAAgacaaattcacaaaattttctttttgaata
aagTACCTTTTGTCAATCCAATCTTATCTCAATATAGAAAGTCGGTTCTT
CatgataatttattttcagCTGCTTAAAATTTCTCGCTGAAACCTTTTAT
TTTTTAGTGCCTGTTCGTGTTTATGCTGATGGAATATATGACATGTTTCA
TGCTGGTCACGCGAATTCATTACGTCAAGCCAAAAGTCTTTTTCCAAATA
CTTATCTTGTTGTAGGGTGTATGTAGACTTTTATTTCCTttactttgaaa
tttcgaaCATACGATCAAAAGCTTTCCATATTATCAACCAAGAGGCTTTG
AAAGCATtttattcaatgtttttatGTGAGTTTTTCTTGGAGCAATTTGG
CAATTACTGTAAGTTTCTTGAAATAATTGTGAAACCTGACACTATATCCC
TcttggttcttatttttttagcctgCAGTGACCAAATGACTCACAAATTG
AAAGGTTTCACAGTGATGACAGATGAGGAACGTTATGAGATGATCCGTCA
CTGTAGATATGTGGACGAACTCATTACTGATGCACCATGGACTATTACAC
AAGAGTTCTTAGATAAACACAAGGTCTGATTTGCCTGTCAGTCGAAATTT
TGTGGCAGGAACAGGCATGAAATACCCTTGAAATGATAACTAACAAATTT
TAATTCGCACtttttttACAGACCACAATATTTTCAGATGTGCCCCTGCG
GTCACCAGTTATAAATTTGTTATTAGAAATTTCTATGTATCATCCTTATT
GAATAActtatggaaattttttagaTTGACTTTGTGGCACATGATGATTT
GCCATATAATTCTGCTGGTCAAGAAGACATCTACAAATTTGTTAAAGAAG
CTGGTCAATTTGCAGCTACTGAGAGGACACCTGGTATTTCAACGTCAGAT
ATCATCACAAGAATTGTACGTGATTACGATATGTATGTTCAAAGAAATCT
TCAACGTGGCTattcaagacaagatttgaatGTTGGATTTATTAAGGTAT
TATACTTTTCTAGCTCTACCAAAGCTCCCCAACATATATTATAGAACCTA
CCATTGTAGGCTGTGTTTGTACTTTAGAGAAACGGTTAATGATAATCTGA
CAAAGTGCTTGATATTTACTGCTTAAGGAAGAATAAATATTTTCCATCAC
TAAAGTatccaaatttcttttttaaacaacTTATCTGCTCTATTTAACCT
TATTAAAAGTACATGACAGTACATAACAAATCTCTTTTTTCTTGTACATT
TTGAACAAGTGTAGCAGCACGAAACTTTAAAGTTCTGtacttttatagaa
aaaaaactttctttttttaattttatttataacCTTAGGAAAAAGAAATC
GTTGTCAAggagaaatataagaaaatcaaagatCGTTCTCAAGAGTTGAT
CACAAATTGGGAAGATAAATCAAGAGAAGCTATCATGGGTTTCATTGAAA
TGTTTGGACCTGATAGTATGATggtatgaaaatttctttgttcttatttc
AATCTTTGATTGAGGGCTTTTTTGCTTTATTGGTCGCttcttgaaaataa
tatttcatattTGTAGTAGTACCAAACTATACTGTGTGGTTATGAATCCC
CTAGGTAACAAATAATGGAGCCCCAGATACATATATCAACAAaaattagg
aattttttttatttagatagGTCGTAGAACTGTTGATTTTCTTTCACTAA
TTATaagattttgtttctttttttacagACTGGTTTATGGGAACGAGGGA
AGAACAGGCTATCAGTAACCAGCAGAAGAATCCGAGAAGCTATTTCACCA
CCGCGGTCACCTATGGGTGGAGAGGGGACATCTTATGATGGACACATCAG
TAGTGACGATGAGGATCAAAGTGATATTCCAAATGGAAGCATTGAAACCT
ATAATAATCTTGATGGGCTTAGTGATACTGAAAAATGA Coding sequence (CDS) from alignment at sc0000238_pilon:455466..460503+ >XLOC_010039 ID=XLOC_010039|Name=XLOC_010039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0000238_pilon:455466..460503+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattcaaaatataaTATGGCAagtataaagaaaagaaaatcagaaGT
TAATAATGCTGAACCAGCCAGTAAAAAACCAAAGCAATCTTGGatgaatt
caaaatataaTATGGCAagtataaagaaaagaaaatcagaaGTTAATAAT
GCTGAACCAGCCAGTAAAAAACCAAAGCAATCTTGGaaagattttAAATT
GTCTGCATCGGATATGGCAATTCTTCATGATCCAAGTAATCCTACAGCTG
ATTTTTGGCCAACACGAGAAAAGACAATCACATTAGAAGAAGCAAAGCTT
GGAACTGATGaaagattttAAATTGTCTGCATCGGATATGGCAATTCTTC
ATGATCCAAGTAATCCTACAGCTGATTTTTGGCCAACACGAGAAAAGACA
ATCACATTAGAAGAAGCAAAGCTTGGAACTGATGTGCCTGTTCGTGTTTA
TGCTGATGGAATATATGACATGTTTCATGCTGGTCACGCGAATTCATTAC
GTCAAGCCAAAAGTCTTTTTCCAAATACTTATCTTGTTGTAGGGTTGCCT
GTTCGTGTTTATGCTGATGGAATATATGACATGTTTCATGCTGGTCACGC
GAATTCATTACGTCAAGCCAAAAGTCTTTTTCCAAATACTTATCTTGTTG
TAGGGTcctgCAGTGACCAAATGACTCACAAATTGAAAGGTTTCACAGTG
ATGACAGATGAGGAACGTTATGAGATGATCCGTCACTGTAGATATGTGGA
CGAACTCATTACTGATGCACCATGGACTATTACACAAGAGTTCTTAGATA
AACACAAGcctgCAGTGACCAAATGACTCACAAATTGAAAGGTTTCACAG
TGATGACAGATGAGGAACGTTATGAGATGATCCGTCACTGTAGATATGTG
GACGAACTCATTACTGATGCACCATGGACTATTACACAAGAGTTCTTAGA
TAAACACAAGaTTGACTTTGTGGCACATGATGATTTGCCATATAATTCTG
CTGGTCAAGAAGACATCTACAAATTTGTTAAAGAAGCTGGTCAATTTGCA
GCTACTGAGAGGACACCTGGTATTTCAACGTCAGATATCATCACAAGAAT
TGTACGTGATTACGATATGTATGTTCAAAGAAATCTTCAACGTGGCTatt
caagacaagatttgaatGTTGGATTTATTAAGaTTGACTTTGTGGCACAT
GATGATTTGCCATATAATTCTGCTGGTCAAGAAGACATCTACAAATTTGT
TAAAGAAGCTGGTCAATTTGCAGCTACTGAGAGGACACCTGGTATTTCAA
CGTCAGATATCATCACAAGAATTGTACGTGATTACGATATGTATGTTCAA
AGAAATCTTCAACGTGGCTattcaagacaagatttgaatGTTGGATTTAT
TAAGGAAAAAGAAATCGTTGTCAAggagaaatataagaaaatcaaagatC
GTTCTCAAGAGTTGATCACAAATTGGGAAGATAAATCAAGAGAAGCTATC
ATGGGTTTCATTGAAATGTTTGGACCTGATAGTATGATgGAAAAAGAAAT
CGTTGTCAAggagaaatataagaaaatcaaagatCGTTCTCAAGAGTTGA
TCACAAATTGGGAAGATAAATCAAGAGAAGCTATCATGGGTTTCATTGAA
ATGTTTGGACCTGATAGTATGATgACTGGTTTATGGGAACGAGGGAAGAA
CAGGCTATCAGTAACCAGCAGAAGAATCCGAGAAGCTATTTCACCACCGC
GGTCACCTATGGGTGGAGAGGGGACATCTTATGATGGACACATCAGTAGT
GACGATGAGGATCAAAGTGATATTCCAAATGGAAGCATTGAAACCTATAA
TAATCTTGATGGGCTTAGTGATACTGAAAAATGAACTGGTTTATGGGAAC
GAGGGAAGAACAGGCTATCAGTAACCAGCAGAAGAATCCGAGAAGCTATT
TCACCACCGCGGTCACCTATGGGTGGAGAGGGGACATCTTATGATGGACA
CATCAGTAGTGACGATGAGGATCAAAGTGATATTCCAAATGGAAGCATTG
AAACCTATAATAATCTTGATGGGCTTAGTGATACTGAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:455466..460503 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 838-1047:4829 |
| Aaloc | 703-837:4439 |
| Aaloc | 481-702:3875 |
| Aaloc | 331-480:3524 |
| Aaloc | 220-327:3210 |
| Aaloc | 94-216:2746 |
| Aaloc | 1-93:1 |
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