|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000475_pilon:78946..83479- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009984 ID=XLOC_009984|Name=XLOC_009984|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4534bp|location=Sequence derived from alignment at sc0000475_pilon:78946..83479- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGATACCCAGGCGGCTACAACTACTGAAGTCCTTGAGGTTTCACA
GCAACCAGCACAGACCCAAGCACAAGCCAGTGTGGACGATGGTGAACAAC
CAGGGCCATCGAACGTCATCAATGACAGAGAGGTTGATACAGACACTGAT
GATAGTGACGTCGAAGAGCAATTGACATTGGAGCTAGAGGAAGCCCTGGC
CGCACAATCGGATGAAGATGAGGATGAGGAATACTTCAATATAGAGGAAG
AGATGGATGAAATAGAAATAGAGGCAATCGAAAATCTTGCGGCAAAAGAA
AGACAACAGGCCGAGGAACAACTCCCCACAGATACAGTAGAGGAAACTGA
GGAAATGACGCAGGAAGAGGACGGAGATGGCATCAGCTGGGTGTGTCCAG
GCTGCAATATCGGTTGGAACAGCGACACTGCTTCTGAAATGTGAGTGTCT
GCACCCTGTCTATATAAACTNAAAGCGGGGAAGTACGGGAGCTCGTCAAT
ACCAGACAAAGTATGACCCAAACGATGGGACAATGGAGAGGGCGTTAACA
GAAATCAGGTTGGGAAAAAAAGTCAAAGATATCGCGCTAAAATATAAAAT
CCCACGGTCCACTCTGTATGACAAAATAAAAGGTAATATTTACGATACCC
GAGAAAAAAGAGGGAACTTATTATAAGGATTTCATTTAAGGGCTCTGACC
ATAGTCGGTAAATTGATTTTAGTATTTGAACATAACAGTTATATCTTAGG
TTCTTTAAGACTTTTAACAAAGAATTGCCTTTATAAATTTATAAAATTTG
CCTTTATAAAATTATTTTCCTCTGCATACTCTCAGACAATCGCCCGACCG
TTCTCAGTCATGATGAAGAGAAGGCACTGGCTTCAATGGTAGAGCTGACA
TGTGAGTGGCAGGTACCCATGGACAGAACAGACCTACGATACTTTGTGCA
AGACTACCTAAACAAAAAGGGCGTAAAGGTTAGGGAAATATTCTGATGTG
TTTTTAGGGGAAATGAACTGCCAGAATTGTGAAGAATTTTATTAAACCAA
TTTACATTATTATGTTTTTTTATAAGCATTGAAGTTATAAACATCTAGAA
TCAGTAATGGCAATAATTTAAGCATATACTAGGCATTTCTCGAGACTAAG
AAAATTATCCTGATTTGGGCTGGGTTTCACGGATTTTTCCTAACATTTTG
CTCGGGGTATAAGCACTCTTACGAACAGTATTCGGCCTTGCCACGCCCTC
AACCTAGGCATCGCTGAACCTATACGCTTATATAAAACATGTATATATTG
TCTTACAGTTGTTCAGAAATGAAAACCTCCCCAGCATGGATTGGACCGAA
CGCTTTATTCGTGACTTCAAACTCAAACTACGAAGTGTAGACAACGTCAA
ACCGAACAAGTGGGTTAAAGTTTGGAAGATGTAAACAAATTTTCATCAAT
CTGGAAAAAGAACTCGACGGGGTACCGCCAGAGAATATTTGGAATTTTGA
CGAGACTAATTTCACTGACGATCCAGGAAAGAAAAAGGTTAAAACATTTC
TGAATTATTGATCAAATCTGACCGTTTTTTACATCAGAAAAGGTTTTTTA
ACCCCTTCTCCTGTGACCCAAATGCAAATTCGTACCTTTTCAGATAAAAT
CAGGCAAATAACCAAATATAGGGATTTATAATCTTCGGTTTTACAAAGGT
GGAGATTTTATACTCAATTCCTAATCATAGGTTAACTAATTTTATCAAAA
GTTTAATTGAATTCTCGTACCTTTTGTGTAACTGTAGATGTTAGTATTCG
TGTCAGGAAGTTCAGGATTACATTGATGTTCAATTTTTTACTTAGCTAAC
CTAGCTAGCCCATTAAGATCTGACCGCGTCCATTACAACAGGAGTCTTTT
TGGATTGTGAGCACCATATCTCTGTTTCACAGGGCACGCTAATTAACTTT
ATCGACATATATTATCTCGTCCAGGTCATTGTATCTAAGAGGAGACGGAG
AGTTGAACGATGCATGCCTCACTCGAAAACTTCATTTTCAGTCATGTGTT
GCGGCAACCCGAAGGGCGAGTTCATGCCACCCATGATTGTATATAAATCG
AAATGTATGTGGGAAAACTGGAAGAAACACGGGCCAAGAGGTATGTATGT
TTCTATGTAGTAACTGACTCCTCCTATTTCATATTCGTCAACAATAAGGT
TTTTTGCGTAGTTATTTTACCGTTCACATAGCCTGCCTTAGCATTGATTT
ACAGACAATACCTGAGTGACTTAATTGTGGGCTATCCCCATTGAAAATTT
AATGGAAAAAATTGGCCTCCAAAACCATCCCCACTGTAAATTTTGAGCTG
GAAACAATAGATTTTCTATCCATATTGGGATTTCGATAGAAATTTTCATC
CCCACCGTGGGAAAAGGTTCCACCGGGGCACTGAGACAGGGGTGTATTAT
AGTGGAAATAACGTCTTATCACATTACTCTAAGGTGCTTCGTATACTATG
AGTAAAAATGGTTGGTTTGAGGCACAATCCTTCACCAAATGGTTTATGGA
CCTAGCGTTACCACGTCTAAAGGAGTTGACTGGAAAGAAGGTCATCATTG
GTGACAATCTTGGGTGTCATTACACTGCTGACGTCTTGATTGAATGCCGC
CGTCACAACATTGCATTCATTCCGCTCATTCCGAACACCACCCACATTTC
ACAACCCCTTGATGTTGCCGTTTTCTCCCCAGTAAAGAAGTTTTGGCGGC
AAAGCTTGGAGGCATGGAGACGGGAAACCAGAATTAAGGATGACTTACAA
AAAACGTGCTTTCCGGCAATTCTAAGGAGTACTTTTATCAGGATAGAACG
CGAGCTTGGAACTGCCCTAGAATCTGGTTAGTATGCATTTTTATATATGA
TAGCGGTTGATTTTCATAAAAATGCCTTTTTTATGGGACAAGCTGGAGTT
TTTACTAGCTCTTATTTGATTTGGTTGGTTGTTAAGATGTAATAAAAGAA
TCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCGCTTTACATGACC
AATTATTAAAGTATCTTGTAAAAACTCCAAGGCATCTCTTTTTTTATGGA
GACTTGATAATTTTCCCGTCAGTGATTCTTACTTCTTAATTGGACGTGCA
AATACAAATTATTTTTGGGAGTCAACGTAATGAACTTAGAGTTAAAAAGA
TACGACAACGGTTTATGCCGACGGGCCGGATAAATTGTGGATTTTTGAGT
GTTAAATTAGGGTGGGTGAAATTTGCTCTTCTACCTTCGTCTAATGAAGC
CATGAACAGTCGATATCACATTTAATGAATTCTATCATTCACGTCATTTT
AGGATTTCGAACGTGTGGCATTCACCCACTGGACCGTACTAAGATAGCAA
AGAAGATACCTTCACGTGTTCATGTGTTGATGGCTTTGATTTAAATATAT
TCAATGATAGTGTTCTAGACTTTCTCGAAAACAACCGAACATGTTCTGTA
ACCAGTGAGTACACGTTCTTATAAGCATATTTCCTTTTTTTAAACAGACT
CGGTTACGCCTAGCTATATTGTGAATTGAATTCTTCCGAAAAAAGGGAGT
CATTAAAATGGAAAAGATAAACGAAAGTTACACCCAAGTATACACCAATC
AACAAGCTTACAGATATGCTTATTTGTTCACCAAATCCACTACAAAGATT
TTAACCCGGGTGGGGAGTGTTACTTAGGCAAAAATGAGTGCTGGGTATGT
GCGTGGCTTAAGGTCGGTCGGTTTTTTCACCTTCCAAAGTCTCTCGAAGG
GTCGGAAAAATCAGAAAGTTTTAAATCAGTCTCTCTAAGGTGACCCTTAG
AGAGACTAATTTAAGACTTTCTGATTTGTCAGCAAATAGCAATCTCTCCC
TCAACCCTAGTACCCCCCCAGGATTTTAACAGTAGGTTTTGTCCTCGTTA
AAAAGATGGAAAACCGGTCGTTGATGTCACACAATGGAAAAATCTTGCTC
TTCTTGAAATACTTGAAATGACAACTGTTTTCTCCCTTAGACAAACAAAC
CAGAGGCAAGAAATGTGAGCCTGGCAAAAATGCTTGCGACATGCTGGATA
CCCAGGCGGCTACAACTACTGAAGTCCTTGAGGTTTCACAGCAACCAGCA
CAGACCCAAGCACAAGCCAGTGTGGACGATGGTGAACAACCAGGGCCATC
GAACGTCATCAATGACAGAGAGGTTGATACAGACACTGATGATAGTGACG
TCGAAGAGCAATTGACATTGGAGCTAGAGGAAGCCCTGGCCGCACAATCG
GATGAAGATGAGGATGAGGAATACTTCAATATAGAGGAAGAGATAGATGA
AATAGAAATAGAGGCAATCGAAAATCGTGCGGCAAAAGAAAGAGAACAGG
CCGAGGAACAACTCCCCACAGATACAGTAGAGGAAACTGAGGAAATGACG
CAGGAAGAGGACGGAGATGGCATCAGCTGGGTGTGTCCAGGCTGCAATAT
CGGTTGGAACAGCGACACTGCTTCTGAAATGTGA Coding sequence (CDS) from alignment at sc0000475_pilon:78946..83479- >XLOC_009984 ID=XLOC_009984|Name=XLOC_009984|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1122bp|location=Sequence derived from alignment at sc0000475_pilon:78946..83479- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGATACCCAGGCGGCTACAACTACTGAAGTCCTTGAGGTTTCACA
GCAACCAGCACAGACCCAAGCACAAGCCAGTGTGGACGATGGTGAACAAC
CAGGGCCATCGAACGTCATCAATGACAGAGAGGTTGATACAGACACTGAT
GATAGTGACGTCGAAGAGCAATTGACATTGGAGCTAGAGGAAGCCCTGGC
CGCACAATCGGATGAAGATGAGGATGAGGAATACTTCAATATAGAGGAAG
AGATGGATGAAATAGAAATAGAGGCAATCGAAAATCTTGCGGCAAAAATG
CTGGATACCCAGGCGGCTACAACTACTGAAGTCCTTGAGGTTTCACAGCA
ACCAGCACAGACCCAAGCACAAGCCAGTGTGGACGATGGTGAACAACCAG
GGCCATCGAACGTCATCAATGACAGAGAGGTTGATACAGACACTGATGAT
AGTGACGTCGAAGAGCAATTGACATTGGAGCTAGAGGAAGCCCTGGCCGC
ACAATCGGATGAAGATGAGGATGAGGAATACTTCAATATAGAGGAAGAGA
TGGATGAAATAGAAATAGAGGCAATCGAAAATCTTGCGGCAAAAGAGCTA
GAGGAAGCCCTGGCCGCACAATCGGATGAAGATGAGGATGAGGAATACTT
CAATATAGAGGAAGAGATAGATGAAATAGAAATAGAGGCAATCGAAAATC
GTGCGGCAAAAGAAAGAGAACAGGCCGAGGAACAACTCCCCACAGATACA
GTAGAGGAAACTGAGGAAATGACGCAGGAAGAGGACGGAGATGGCATCAG
CTGGGTGTGTCCAGGCTGCAATATCGGTTGGAACAGCGACACTGCTTCTG
AAATGTGAGAGCTAGAGGAAGCCCTGGCCGCACAATCGGATGAAGATGAG
GATGAGGAATACTTCAATATAGAGGAAGAGATAGATGAAATAGAAATAGA
GGCAATCGAAAATCGTGCGGCAAAAGAAAGAGAACAGGCCGAGGAACAAC
TCCCCACAGATACAGTAGAGGAAACTGAGGAAATGACGCAGGAAGAGGAC
GGAGATGGCATCAGCTGGGTGTGTCCAGGCTGCAATATCGGTTGGAACAG
CGACACTGCTTCTGAAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000475_pilon | genome | sc0000475_pilon:78946..83479 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 298-561:265 |
| Aaloc | 1-297:4535 |
|
