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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:426902..431579+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009560 ID=XLOC_009560|Name=XLOC_009560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4678bp|location=Sequence derived from alignment at sc0000083_pilon:426902..431579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAATTTTGCAAAAGTTGCATCAATCTAAGGCATGGTTTACATTT
AGCAAGAAGAACTTTCAAACCGACCACACAAAGtaatattttctaattta
attctatttttattgttcgAGAACAATCTTCTAAATCTTCTAATcttcta
aaaaaaactttatcatttttataatcGGGAAAGATatgacattttctttt
taaagttaACCAAATTTTGAATGCGTTCAATCACTTTTCCCAActctaac
tttttcatttttttcaggaccactaTTACTCCCCACATACAGTCAACTTC
GTTCCTACTCAATCAAAGACAGAACCTCAGAACGTAAATATAGACATGGA
AAACTGGTAAGAACCGTTTGCTTTATTTTCGTTTTCCAATCGTGAAGTAA
TTTTAAAAGCAGATTAGGGAATAAGTATAGATCTCAtcggagtttttaat
ttttcttaaaaaagtgatgcattgtgggattgtttcaggagtattacaat
aaaattccctcgaggaaaaagagatttctattgtaatactcccgaaacaa
tcccacaatgcatcgcttttttagaaaaataaaaacggaCGCTTCCGAGA
AAATTCTAGTCATCACTAGACTAGAGCCTGCTTTTGGctaaactttgctt
tttgataatttttgatgacgctgagtccagtgaagtagactaggagcatt
tggcgaggtcgccattttgagaaaaaatgttaaaaatctaaatagtaata
aaactacatggcgttgagagatataataaaaaatgagaaacatcaataac
agatttgcaatcccttattctcaaataaaagcATTgcttttaccttccaa
aaacaactaaaatctggcggactgttttacagtccgcctaggcaaaagca
tattaccatatactaccgggccacttaatcgcgccatccagtctatataa
atataaaaagctttaagtggaccccgggctagtcTATCATTAGTTCTTAA
GGGTTTCATTTTCAtgtaagtgttcccgtttcatatcagacacatgtttc
atatcaggacagtgtcttcctattgttatattttgagatgatataagcaa
aaaaatgtttttctcttcctctttctggccaaccttgctccacatccgtg
tcaatatcaaaaagcttgtaaattaaaattgatgagtaagcaaacgatat
cactcttatttaaaaacaaaacctttaagtgaagtacaaataaataacaa
tagaataatCATGATATGGAGTGTTGAGTAGATGGATTTTACTTGTGATA
ACtatttatgaaaatgattttctcaCCTTTTCATTCATTAGATTGTAGAG
CATGTGGAAGATCCAACATTGTACCCATTCTTTCTGATGATCTTCTCTGG
TACCGATCAAGTCGTTCTTGATGCTTATCTCCATGAAGTTAAAAAAGCTG
CCAAAATGGTCGACGTCAATCTTACCAAAAGGTCAGGGCTTTTGCGAATG
TTTGAAGCGAAaattgactaaattttgacaaaaaatttgcagtcgcttga
ttttttgatttttagctcAGACATGCATCCATCAACACGCCTTCGATTAA
AAAATCTATGAAATCTTGACAATGTCGGTACTCAGCTTTTCAATTTAGGA
ATAAGTGATAATGTAACCCTGCTAAAGCTTTTCGTTCTTTagcgtattca
tgatatgcaccattacaatgtcttctggCATTATACCATGGacctaacag
ctgattggttgtaagtgacgtcaAATCAGTCAGTACATcgctttcaacca
atcagctgttgggtccatagaagacattgtaatggtacatatcatgaatg
ATACACTTTTTCGAGATTAAtacaatgatttttttgacaTCAAGCAGCAT
CAAGAATATTGTTTTTTCCATGGTATCAGTATACTTCATAGCATTTATTA
TGGTTTTGTTGTAGTTTCAACTTACCAGCAATCGAAGAGACGCACAAAGC
AAAACGCGAGGGGAAAGGACTAGTATCAGAAGTTGTATACCATCTTAAAC
AATATCAACGTGTGGTCGAGGTGAGAATCTACAAATCTTTTCGGAAAcca
aatcaaattttcatcgattCTCCAATcctttgccaaatttaaatgaCTTg
ccaaaagtttcttttttttaaatgaattaacGTAGTGTTTTCTAGCGTCA
ACATTATACAATCTCTTACAGTCTTAcagtctttttaactcgaacttGAA
TGACTCTAAtgactccttaactcgaacaagtttccccgttcctttagtta
acaataccttataaaccttactccataactcaaaatttccttgaCTCGAA
AAAATTTGCGTTCCCCGTACAGGTTCCcagttatggagacttcactGTAA
TAGTAAAggtattttttggacctaccttggaggtcctataaattaacccg
tgttcgtccgtccgtccgtccgtccgtccgtccgtccgtctgttaccagc
ttttctcaggattggctcattagttttttctgatttttgggcacaatgat
gcaaaatggcaatgcccaaaatgtgacggagcccgattttcggaaaaaaa
atttttctggccgaaaatgccggatatatcccggaaaaactggttttttg
gcactttctcgagattttatcattagttttttctgattttttgctcaaag
atgcgtattagcaatgcccaaaacatggtcgagtccgattcttgagaaaa
aattttttccggccggaaatatgccggaaatcgccgtttttctggatttt
cattgggctttttccttatagttggttgttttttcatttaaaaacattat
taatagcaatgcccaccatcaagcatgttttaattttcaataaaattgat
ttttgaagccggaagtatttcttgaatttctcgagctgtactttatattt
tttaatgaaattttgcacactgattcaaaatgacaatacctaaaatgtga
cggagcccgattttcgaaaaacatttttttccggccgaaaatgccggaaa
tatcccgaaaaactgtttttttggcattttctcgagattttatcattagt
attttctgattttttgctcaaagatgcgtattaacaatgcccaaaatatg
gccgagtccgatttttgccggaaattgccgtttttctggattttcattgg
actttttccttataattggttgttttttctttcaaaaacattattaatag
caatgcccaccatcaagtatgtttcaattttcaataaaattgatttttga
agccggaactattaaaaaatcgccggaacaacctgatttcgccggaaaga
cagtatttcttgaatttttcgagctgtactttatatttttttatgaaatt
tttcacactgatgcaaaatgacaatacctaaaatgtgacggagcttgatt
ttcaaaaaatatttttttccggccgaaaatgccggaaatatgccggaaaa
accggtttttgacattttctctaattttcatccttaattttctctgattt
tttgcacaatgatgcgtattcgcaatgctcaaaaaatgaccgagccggaa
atttccgtttttgcagattttcgttggattttttcgttttatgtctttgt
ttttttcaaacaaaaacattatttataagaatgtccacgattaagcatgg
ttcaattttcaataaaactgattttgatttcggtacaggaactttctaaa
aatcgccagaacagccgagaatcgccggatttcattaatttctcgagttg
ttcttgttctttattttttcatattttgaccagttatgtcctatgtgttt
cattgtttcaatgttcattgattagtttgataaccaggtaggtccataaa
agtatcacttgtttatctCAGATCCAGGAATTGACTGGcgaaaaatcaga
catcttttTGGACTACATACAAGAATCGATGCCTGCTGGAGTCAAAATCG
ATATCAGTCTAGTGAGTACTTCTGTTAACTGTATTAACTGTGAGATTACA
ACATTTTTATAGGAAAGAAAGCTCTGACGAACCATTATTTGAGAAAAGCA
CACCGCGGCGAATCTAAAATAGTAACAAATCTGCACAAAGTTATTCATTT
GTACGACTTACTACAATCTCATCCTCCTTTGCGTTAATTACTCTTGCGCG
TTGATTACTtataatatcaaaagaaaggtaaCAGTTTTCACGGTTTTCCA
ATCTTCGAAATTAACTGtgggattggaaatctcttccAAATTTAAGTTGA
AATAAAATGACGTGTGCGACGTGGATCGCTATTGGTCCATCTAGGGGTAC
ATCTAGTGTTTTGGCGACGGTCTTGCTTCTTATTCCCATAAAtcaggaaa
attgaaaattttaagattctTCGTTAATGGTCAATCAATCAACAACCATA
ACTTTCTAAGGGTTCGCTCCGCATTCTTTATTTTGGTCATATCTGGTCCG
CATTCTTTAGTTTGGTCATATCTGGTccgcattttttattttgctcatAA
ATATCTGTCCAATAACCGATCCTTAACTTCCTTCGAGTTCTATTTGACAc
gtctcttcttcttttttatagaaACGTTGGGAAAAATTGGTGGAACCCAA
TCACATTATGTTTAGAGAAGAAAACTaa Coding sequence (CDS) from alignment at sc0000083_pilon:426902..431579+ >XLOC_009560 ID=XLOC_009560|Name=XLOC_009560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000083_pilon:426902..431579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAATTTTGCAAAAGTTGCATCAATCTAAGGCATGGTTTACATTT
AGCAAGAAGAACTTTCAAACCGACCACACAAAATGGAACAATTTTGCAAA
AGTTGCATCAATCTAAGGCATGGTTTACATTTAGCAAGAAGAACTTTCAA
ACCGACCACACAAAgaccactaTTACTCCCCACATACAGTCAACTTCGTT
CCTACTCAATCAAAGACAGAACCTCAGAACGTAAATATAGACATGGAAAA
CTGgaccactaTTACTCCCCACATACAGTCAACTTCGTTCCTACTCAATC
AAAGACAGAACCTCAGAACGTAAATATAGACATGGAAAACTGATTGTAGA
GCATGTGGAAGATCCAACATTGTACCCATTCTTTCTGATGATCTTCTCTG
GTACCGATCAAGTCGTTCTTGATGCTTATCTCCATGAAGTTAAAAAAGCT
GCCAAAATGGTCGACGTCAATCTTACCAAAAGATTGTAGAGCATGTGGAA
GATCCAACATTGTACCCATTCTTTCTGATGATCTTCTCTGGTACCGATCA
AGTCGTTCTTGATGCTTATCTCCATGAAGTTAAAAAAGCTGCCAAAATGG
TCGACGTCAATCTTACCAAAAGTTTCAACTTACCAGCAATCGAAGAGACG
CACAAAGCAAAACGCGAGGGGAAAGGACTAGTATCAGAAGTTGTATACCA
TCTTAAACAATATCAACGTGTGGTCGAGTTTCAACTTACCAGCAATCGAA
GAGACGCACAAAGCAAAACGCGAGGGGAAAGGACTAGTATCAGAAGTTGT
ATACCATCTTAAACAATATCAACGTGTGGTCGAGATCCAGGAATTGACTG
GcgaaaaatcagacatcttttTGGACTACATACAAGAATCGATGCCTGCT
GGAGTCAAAATCGATATCAGTCTAATCCAGGAATTGACTGGcgaaaaatc
agacatcttttTGGACTACATACAAGAATCGATGCCTGCTGGAGTCAAAA
TCGATATCAGTCTAaaACGTTGGGAAAAATTGGTGGAACCCAATCACATT
ATGTTTAGAGAAGAAAACTaaaaACGTTGGGAAAAATTGGTGGAACCCAA
TCACATTATGTTTAGAGAAGAAAACTaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:426902..431579 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-564:4622 |
| Aaloc | 418-507:3922 |
| Aaloc | 313-417:1966 |
| Aaloc | 172-309:1342 |
| Aaloc | 85-171:270 |
| Aaloc | 1-81:1 |
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