XLOC_009180.3 (mRNA) -

Overview
NameXLOC_009180.3
Unique NameXLOC_009180.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000057_pilon:813221..814429-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009180.3 ID=XLOC_009180.3|Name=XLOC_009180.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1209bp|location=Sequence derived from alignment at sc0000057_pilon:813221..814429- (Clytia hemisphaerica_ch_hm2_pilon)
CTATCATTAATCCACATAACATCAAAAACCTCTACTACCTTTGTGATCAC
TGTGCTAATGAGAACCTCCCAAAGAGCGAAGCAGGAAAGAAGAAAAACAA
AAGACAGAGAGACCTTAATAACCTTGTCAAGCCAATACCAATGGCAGGTA
AACAAAACCTGTGCGCACTATGTAAAAGGAAAATGCAAGTACGGAATAAA
GGGAAGAGACTGCAAGTTCGACCATCCAAAAGCATGTCGAAAATTCATGA
AGCACGGAACCAGAGCCAGAGTTGGCTGTCAAAAAGGTAGAAACTTGTCA
CCCTTTTTTCACTGAGGAAAGGAGAATGTTTCAATAAGATGTGTCAGCTA
ACACATGTAAAAGGAACAAAAAGAAATGCCGAAACCTACCCACAGAGAGA
GAGAGAGAATATCAAAACAAATGGGATGTCAAAGAAAATCAGTACCAAAA
TGATTTTAATGAACAACACTATCAGCATGACAACAGGGAGTATGGATCTC
AAGAAACCCATCAAAGGGATAACCAGAATACAAACAAAGAAATGGATTTT
TTAGCTATTTTTCAAAAATTCAAAAAAGACTTAATACTGGAGATCGATCA
GAAAATATCCACACTGATGGACAAACAAGTGAGGAAGGAAATACCACTAT
AATACCAGTATCCTCAACGAATGATGTCCCCTCAGAACACCAACTGGGGA
ATAAACCCGTCAATGATCAACCCGTCTCGCTAAATTCATTTTCAATTCTA
AACGTTCAAGGACTTAAACCACAAACAGTTCAATCAACAGTACCATATAT
CAAAGACAAGTTGATTGAGAATAACTTTTTATTTATGATTTTAACAGAAA
CTTGGCTCAAAGACCATAATGATGCTGAGTTACACATAGAAGGCTATGAA
ATATTTCGGTCCGACAGAAAAAGACCAAAGTCACGATTTGGAAGATGTAG
TGGTGGTGTCGCTATATACATGAGAGAAGATATTTCATCACACTTCAAAC
AGACCGTTACACACTCAAATGGCGTTATCGAAGTCATCTGTCTGAGTTCG
ACTACATTGGATATCCAAATATGGGGAATATACCGACAGCCAGACGACTC
ATCAAACGGGAATCCATCTAAGAATGAACAATTCAAACCAGTTATAGAGT
TAATTAAATCAGAACTAGACAAAACTGAAGGAAAAACACCAGACATCTTC
ATAGCAGGT

Coding sequence (CDS) from alignment at sc0000057_pilon:813221..814429-

>XLOC_009180.3 ID=XLOC_009180.3|Name=XLOC_009180.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000057_pilon:813221..814429- (Clytia hemisphaerica_ch_hm2_pilon)
CTATCATTAATCCACATAACATCAAAAACCTCTACTACCTTTGTGATCAC
TGTGCTAATGAGAACCTCCTATCATTAATCCACATAACATCAAAAACCTC
TACTACCTTTGTGATCACTGTGCTAATGAGAACCTCAAAAAGACCAAAGT
CACGATTTGGAAGATGTAGTGGTGGTGTCGCTATATACATGAGAGAAGAT
ATTTCATCACACTTCAAACAGACCGTTACACACTCAAATGGCGTTATCGA
AGTCATCTGTCTGAGTTCGACTACATTGGATATCCAAATATGGGGAATAT
ACCGACAGCCAGACGACTCATCAAACGGGAATCCATCTAAGAATGAACAA
TTCAAACCAGTTATAGAGTTAATTAAATCAGAACTAGACAAAACTGAAGG
AAAAACACCAGACATCTTCATAGCAGGTAAAAAGACCAAAGTCACGATTT
GGAAGATGTAGTGGTGGTGTCGCTATATACATGAGAGAAGATATTTCATC
ACACTTCAAACAGACCGTTACACACTCAAATGGCGTTATCGAAGTCATCT
GTCTGAGTTCGACTACATTGGATATCCAAATATGGGGAATATACCGACAG
CCAGACGACTCATCAAACGGGAATCCATCTAAGAATGAACAATTCAAACC
AGTTATAGAGTTAATTAAATCAGAACTAGACAAAACTGAAGGAAAAACAC
CAGACATCTTCATAGCAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009180.3XLOC_009180.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000057_pilongenomesc0000057_pilon:813221..814429 -
Properties
Property NameValue
Aaloc70-360:292
Aaloc1-66:1210