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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:485382..488698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008584 ID=XLOC_008584|Name=XLOC_008584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3317bp|location=Sequence derived from alignment at sc0000043_pilon:485382..488698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACAAAGAAGATGAAAAAAAAGAAGATCCTGTTCTTAGTGATGA
AGAAAAAGAAACAATTTGTTTATTTGATTTCCAAGAAGAAAAATGTGATG
CTACTTTCATCACCAAAGACAAAAAGTTGAAGTTGCCATCGTCCTTCTTG
TGTAACGTCTCCCAGGCTTTCAAAGAAGAATTAGAAAAACACAAAAATGT
GATCTCTCATGGTAACTTTAGCTCAGAGGTTTTGATAGCTGCACTTTCAT
TTTACAGACCAAGGTTTTTTGCTCAACATGGATTTGATAAAGGTATATAA
ATCATAGTACTCAATAGTAGGGGGCCATTCTTTAGGACCCGTGACAATAA
TTTCCTGAGTGGACTTTTTTTTGCTCATTCGAAAGAAGAATGTATTTAGA
AACTTTTTTGAGAGGGAGTAAATTAATTAGGTCCAGCAATTTTTTTTATG
GGGAAAAGACTGACGTCACAAGCAAAAACCCTTGGGACCCGAAATTTGAC
GAAATTTCAAAGTCGCTAAAACACAAAACCACTTATACCATTGGAAAGCT
CTCGAAAAACGATATAGAGGACTTTTAAGCAGATATGGTCGACTTCTCAA
CCTAACTCTAACCTATAAAAATTAACGTCAAACATTGAGAAAACGTCACT
TTGGCACCGTTTTTCTCGAGTTACGTTGAGAAATCGACCATATCCGCTTA
AAAGTCCTATTTATTGTTTTTCAAGAGCTTTCCAATGGTATAAGTGGTTT
TGTGTTTTAGCAACTTTGAAATTTCGTCAAATTTCAGGTCCCAAGGGTTT
TTGCTTACGACATCAGTCTTTTCCCCATAAAAAAAATTTCTGGACCTAAT
TAATTAATTAAAAGAAATTCCACTCCGAAAATTGTTGTCACAGGTCCTAA
AGAACGGCCCCCTACTATAATACATTCTAAATTTAGTTTATGTATTTCTC
TTCATTGTGTTTACACGCATAAGACAATATTATCAGATGTGAATTTCTCT
ATCAGCAAATATCAAAAGGAGCTACTGTAGCCCTTAAGGAAGTATAGTGT
AATTATAGGATTCCACTTTTTCAAAACAAACTTCTTTTTTTGTCTTACCA
TGAAGGTAATAGAAATAGATGGAGAGTCGACTATTTCTTCTCTATTCTGA
TTGATCATTGGAAGCAAACGGCTCTTTGAGTTGCTTTGGGAATAAGATAA
TTAACTTTGCGTGTACTCGTGGGAATAGTTAAGATGATGAAATCTGAATG
AAAATACATTACATTTTTAACAAGCATATTGAAAGGTACTAGCCTTACCA
TAAAAATCAAAAAAAAACTTGCTATCGTAATCACAATGCCACAAAATTCT
AGGGGTTACTGCATTTAAAACCATCAACAGATTTAAAAACAATATGTTAT
GATTAGGAACCTTGTATGACTCATTTTTTCAAAATTAAAAACTGCTGCCC
TTTTGTAGGTGAAGAGTTTGAAAGAAGAAACTTTCAAAGAAAGTGTGATG
AAACACTCATAATGTCGGCCTGATAATGTATCTGTATGAAATTACTTCTT
TCATTAAAAGCCATACATCAGTTGAAATTATTTCAAATTGCATTTTAACA
ATTTTCTGCAAAAATAAGTTTTTCAAAATCAACCAAAAAGCTTTTCTCTG
TAGCCTTTTTTTTTAAGTTATAAATTTGTGTTTTTTTTGTTTCAAATGAT
GTAACATCAAAGGAAAGCCACTTTGAATAGATTTATAAAAGATTTCAAAG
ACCATTTAGGTCATTATGGAGACGTTTTCTCTCCATCTATCTTTATTACC
TTCAATGTCTTACACATGATGCTCAGCTGTTAGAACACTAGGATTATATC
AGATAGTCAAATTCATGATTATGAGCATATTATTTTCAAATTGGTAGAAT
AATGTTACTTCTTAAAATTTTTTTTTTCAGATAAGCTTGTTTTGGGACAA
TCAAGATATTTATGCTGGGATATACTGTCCTTTTGTACACAGTGGCAGCT
GACTTCATTGAGTGATTTCATCGAAGAATCACTTGTCAAAAATTTTGAAA
AGTTCAGTGGTAATTTGACTAGAGGAGATGTACTCTTTATAAGAATGGCA
AATGCATTTAACCTCAAATTACTGCTATGCCTTTTTATGAACAAGGATCC
TTATGTACCTCGACCACGTACTGCTAAAAAAAATCTCATGCTTGCAAATG
TATTTCAAAATCTAGAAAGGACTTTAAAGTATGAGATATTGAAGAATACC
ATTATGCGCGAAACTGTTCATATGCCAGGATCCAAAGAATTCTTGGAGCT
CAAAATCATTCTCAACTTCTTAGATGCATTGATTTATGAAGATAAAATAC
TGGATAATTCGACTTATAATTCAAGAAAACGAAGATTTGAATGGGACTTT
AACTTTAAGAATAGTAAGAAACAAAAGACCAGCTATAATTCATTTCAAAT
TAAAACTCCAGCTACTGATGTCCAACTCCTTGTTGGTGATGTGAAACTTT
ACGTCAATTCTTTTACGTTAACAGAGAATTCACCAGTTTTCAAAGTTATG
CTGCAGTCTACATTTAGAGAAGGCCAAGAAAAGTTAATTCAGCTGCCTGG
AAAGAATGTCACAGAAGTGGTTTCCTTTCTAACCTTCATGCTTTATCACG
GAGAAATAAATCGTAAGTCAAGAATTTTATTTTTAAAAGTCTTATTTTCT
GCAGATATCTATAACATAAATTTGAAAGATTTGTTGAGTTCATCATTTTA
TTTTGTACTTTAATTCCAATCAAATATTTGTATATTGTTGTAATTTTCAT
TTCTTTTTTAGGCAATACAGATATTTTCTCCCTTTGCAAATTATGCCATG
AATATCAAGTGGATTGGCTTTCAGACAAAGTCATGGAATACTTAAAAACA
TTCATAGTACAAGAGAAACCTCAATATCAATCTCAAACCATCTTCAATTA
TATAAATCTGGCTGTTTTCATGCAATGGGAGATTATTGAAAAACAGTTTC
TTGATCAACTAACTGACTCATTTGTTATGCTTCAAACTCTATCTGAATTT
AATGCTCTTGATTTGAGATTGAAAGTACTTATTGCACGGAAAAGATTATG
GGTTTTATTATCAGGAAAATCATTGGATAAAACATTTATCGAAACGCTGT
TGAATACAAGAGATTTCGGGATGTTGTCAGTATTAAGGAACTATCAACAA
GACAAGTTGTTTACCTTGGCTGAAGCAAAAGTCACCACAGAAGGTTGTTG
CAAACTTACTGCAGATGTTCCTGATGACTTATTGCCAGACTGGTTTGATC
ACGAAGAAGATTATTAG Coding sequence (CDS) from alignment at sc0000043_pilon:485382..488698- >XLOC_008584 ID=XLOC_008584|Name=XLOC_008584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000043_pilon:485382..488698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACAAAGAAGATGAAAAAAAAGAAGATCCTGTTCTTAGTGATGA
AGAAAAAGAAACAATTTGTTTATTTGATTTCCAAGAAGAAAAATGTGATG
CTACTTTCATCACCAAAGACAAAAAGTTGAAGTTGCCATCGTCCTTCTTG
TGTAACGTCTCCCAGGCTTTCAAAGAAGAATTAGAAAAACACAAAAATGT
GATCTCTCATGGTAACTTTAGCTCAGAGGTTTTGATAGCTGCACTTTCAT
TTTACAGACCAAGGTTTTTTGCTCAACATGGATTTGATAAAGATGGAAAA
CAAAGAAGATGAAAAAAAAGAAGATCCTGTTCTTAGTGATGAAGAAAAAG
AAACAATTTGTTTATTTGATTTCCAAGAAGAAAAATGTGATGCTACTTTC
ATCACCAAAGACAAAAAGTTGAAGTTGCCATCGTCCTTCTTGTGTAACGT
CTCCCAGGCTTTCAAAGAAGAATTAGAAAAACACAAAAATGTGATCTCTC
ATGGTAACTTTAGCTCAGAGGTTTTGATAGCTGCACTTTCATTTTACAGA
CCAAGGTTTTTTGCTCAACATGGATTTGATAAAGATAAGCTTGTTTTGGG
ACAATCAAGATATTTATGCTGGGATATACTGTCCTTTTGTACACAGTGGC
AGCTGACTTCATTGAGTGATTTCATCGAAGAATCACTTGTCAAAAATTTT
GAAAAGTTCAGTGGTAATTTGACTAGAGGAGATGTACTCTTTATAAGAAT
GGCAAATGCATTTAACCTCAAATTACTGCTATGCCTTTTTATGAACAAGG
ATCCTTATGTACCTCGACCACGTACTGCTAAAAAAAATCTCATGCTTGCA
AATGTATTTCAAAATCTAGAAAGGACTTTAAAGTATGAGATATTGAAGAA
TACCATTATGCGCGAAACTGTTCATATGCCAGGATCCAAAGAATTCTTGG
AGCTCAAAATCATTCTCAACTTCTTAGATGCATTGATTTATGAAGATAAA
ATACTGGATAATTCGACTTATAATTCAAGAAAACGAAGATTTGAATGGGA
CTTTAACTTTAAGAATAGTAAGAAACAAAAGACCAGCTATAATTCATTTC
AAATTAAAACTCCAGCTACTGATGTCCAACTCCTTGTTGGTGATGTGAAA
CTTTACGTCAATTCTTTTACGTTAACAGAGAATTCACCAGTTTTCAAAGT
TATGCTGCAGTCTACATTTAGAGAAGGCCAAGAAAAGTTAATTCAGCTGC
CTGGAAAGAATGTCACAGAAGTGGTTTCCTTTCTAACCTTCATGCTTTAT
CACGGAGAAATAAATCATAAGCTTGTTTTGGGACAATCAAGATATTTATG
CTGGGATATACTGTCCTTTTGTACACAGTGGCAGCTGACTTCATTGAGTG
ATTTCATCGAAGAATCACTTGTCAAAAATTTTGAAAAGTTCAGTGGTAAT
TTGACTAGAGGAGATGTACTCTTTATAAGAATGGCAAATGCATTTAACCT
CAAATTACTGCTATGCCTTTTTATGAACAAGGATCCTTATGTACCTCGAC
CACGTACTGCTAAAAAAAATCTCATGCTTGCAAATGTATTTCAAAATCTA
GAAAGGACTTTAAAGTATGAGATATTGAAGAATACCATTATGCGCGAAAC
TGTTCATATGCCAGGATCCAAAGAATTCTTGGAGCTCAAAATCATTCTCA
ACTTCTTAGATGCATTGATTTATGAAGATAAAATACTGGATAATTCGACT
TATAATTCAAGAAAACGAAGATTTGAATGGGACTTTAACTTTAAGAATAG
TAAGAAACAAAAGACCAGCTATAATTCATTTCAAATTAAAACTCCAGCTA
CTGATGTCCAACTCCTTGTTGGTGATGTGAAACTTTACGTCAATTCTTTT
ACGTTAACAGAGAATTCACCAGTTTTCAAAGTTATGCTGCAGTCTACATT
TAGAGAAGGCCAAGAAAAGTTAATTCAGCTGCCTGGAAAGAATGTCACAG
AAGTGGTTTCCTTTCTAACCTTCATGCTTTATCACGGAGAAATAAATCGC
AATACAGATATTTTCTCCCTTTGCAAATTATGCCATGAATATCAAGTGGA
TTGGCTTTCAGACAAAGTCATGGAATACTTAAAAACATTCATAGTACAAG
AGAAACCTCAATATCAATCTCAAACCATCTTCAATTATATAAATCTGGCT
GTTTTCATGCAATGGGAGATTATTGAAAAACAGTTTCTTGATCAACTAAC
TGACTCATTTGTTATGCTTCAAACTCTATCTGAATTTAATGCTCTTGATT
TGAGATTGAAAGTACTTATTGCACGGAAAAGATTATGGGTTTTATTATCA
GGAAAATCATTGGATAAAACATTTATCGAAACGCTGTTGAATACAAGAGA
TTTCGGGATGTTGTCAGTATTAAGGAACTATCAACAAGACAAGTTGTTTA
CCTTGGCTGAAGCAAAAGTCACCACAGAAGGTTGTTGCAAACTTACTGCA
GATGTTCCTGATGACTTATTGCCAGACTGGTTTGATCACGAAGAAGATTA
TTAGGCAATACAGATATTTTCTCCCTTTGCAAATTATGCCATGAATATCA
AGTGGATTGGCTTTCAGACAAAGTCATGGAATACTTAAAAACATTCATAG
TACAAGAGAAACCTCAATATCAATCTCAAACCATCTTCAATTATATAAAT
CTGGCTGTTTTCATGCAATGGGAGATTATTGAAAAACAGTTTCTTGATCA
ACTAACTGACTCATTTGTTATGCTTCAAACTCTATCTGAATTTAATGCTC
TTGATTTGAGATTGAAAGTACTTATTGCACGGAAAAGATTATGGGTTTTA
TTATCAGGAAAATCATTGGATAAAACATTTATCGAAACGCTGTTGAATAC
AAGAGATTTCGGGATGTTGTCAGTATTAAGGAACTATCAACAAGACAAGT
TGTTTACCTTGGCTGAAGCAAAAGTCACCACAGAAGGTTGTTGCAAACTT
ACTGCAGATGTTCCTGATGACTTATTGCCAGACTGGTTTGATCACGAAGA
AGATTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:485382..488698 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1027-1530:505 |
| Aaloc | 295-1023:1386 |
| Aaloc | 1-291:3318 |
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