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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:422389..427579- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008580 ID=XLOC_008580|Name=XLOC_008580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5191bp|location=Sequence derived from alignment at sc0000043_pilon:422389..427579- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCTAGATGGGAGCAAGAAGAGTTGAAGCACCGTACGCGCGAACCTGA
ACGCGTCAGCAAAGCGAACGTACGACAAATCTTCAGTAAGAAACCTCGAA
AATCGATGAAAAGTCGATTCGCATACGATCCATTCGATATCGAGCGAAAA
GACGATGATGATGAAAAATCATCGATCATTTCTCGAAGCTCCTTGCGGCC
GCTTCATCATCAACGTGAGCCCGCGGACGTGATCGCGGCGCGTGATGAGT
TGGATAACATCTTACAACAACAAGATGAGATTGAATGTCGTAAGAAAGAA
ATCAATGATCGACTTACGCGACAGACCCACGAAAACCAGGGCTTGGAGGA
AACAATGTTAAGAAGAGCTTCTAACGAAAATCACCGTGAAGTGATCAAAA
GTCTTTGTTTTCTTCATGAGTATCAAATAAGGTACGGTGTCTCTTCTTTT
TTATAGAAACACAAAGTTTTTTGGAGTTGAGGAAATTTCGGGTTAAAGGG
TAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAGAAAACAATTAAA
ATCATGTGTCCAAAACAAACTTGTAAAACAATTAAACAATCAAAATTAAC
CATATTTGGTTTGATTTTTTATTTTGACATGTGACATTTGTTTTGATTTT
GTATCAGCTGCATACATTTTGTTTACAAATTTCGCAAGTACTGTTATGTA
CCTTTAAAGAGGTTTGAGTTAATGTGACTCTACTGTATTTTTTGCGCCTT
TTTTGTCTTAAAGTCAACCATCTGTTATCTGAATCCCTGTTATTCTAATC
TTTCTGTAATTCGAATTAAAATATTGGTCCCATTATGCGGAATATCGAAT
AAAATACTCTCCATAACCCGAATCTTTCTATAATTCAAAGAAACTTTTTG
GTCCCTTTAAGATCGAAATAGCGAGAGTCAACAATGTTGCACCGAATGAC
CTGGTCTTTTTCATTTGTGATTATTCTAAATGAAGCCCCCTGTCTCACTG
TACTCAAATGATAAATGACCTAGAGTTATTTATGTCTGAAATACCTTTCC
TTTCAAGTTCCCTCGTCCCTTACTCGCGTTTTAAAAAGTTTTCTCCGCAT
CCCTATTGAAGGAGTAAACCAAATTATGAATCTTTCAATCACGACGATGT
TTTTGTTGTTTTTAGGAATATGGAGCTTGAATCTATGGCGTTGATGAAAG
AATTTCTTTTACAACAAAAAGATTTAGAGACACAGCGAAGTGATATGAGA
AGACGTCTGGTTGATGAAGTTGTTGATCTACAGAAAAATGTCATCACTGG
TATGTTTTAATTCCCCACTTTCTATTTCCAGAAAAGATCATAAAACATAA
TACCTTTTAATCACCTTTTGACCGCAAAGTAGAATGTTGCTTATATTATT
CTTGTTTAATTTTTCCCGACATGTTTCGCCCCGGTCCGTTCTCAAGGGTG
GAATGATATTTATATAGAAAAAGATTTTAGACAACATTACGTCATCGTAA
TCGTAATCAATAGCATATGAATTTTTAGTAAACCTCCTGGTTTTTTTACC
TTATCTTGTGCTTCGACTTCCTTTCACAATCCATCAACCATCAATCCATC
TTTCATAAGATATCGAAAGCGATCGGGTTACATAATTTTAAAAAAAATGA
AAAAGTTTTGATTGGAGTGTATGAATTTAAAACTAGACTAGAAATCTAAG
CTAGTTTGATCCAGTCAGTCACCAGGATAAATCTGATGGTAACTTTTGAC
TGACTAAATTCCTACGCAAACTAGGAATATAAACTAGTAAATATAAAAAA
TATTTAAAGGGTCGCAAAGGCTTTATGGCCATAAGCCGCGTGTCCTAGCC
TTTTGAATACGGGCTTAGTTAACTTGGCTAAGGAAGAACGCGGTCTTTTA
AATCACGTATTCAATCATTTTTCTTTCAGAGAACGAACTGGAGTACCCTT
CAGATATTTCCTCCATACATCAATTATACAAAGAACAAGTTCTCAAAGAC
ACTGCCATGCTCTCTTCTCTACATATTGTAAGTTCAGCATTGCTAAGGGA
AACGTGTAAAACTAGTTGGCACACAACGTTTTTTCAACGTTTATCTAATG
TTCACAACGCCCATATAACGTTAGATTAACGTTGAAAGTAAATCTCATCA
CTTGTGTCTGAAAGGCCAATTGTTGTTTTACTAAGATTTACTTTGTAAGC
GACTGTCATCCCAACTGACACCCCAACTGACACAAAATGAAAAAAAAAAT
TTTATGAAGCAAGCCTTGAAGGTAAATTGGTCATCATCGTAAATATTTAA
AGCAAAACTGTCCTATATCCATTTCGATTATTAGTCTGGGTAGGTTATAG
GTCATTGGACATGTGACACAATACACCTTTTTCGACCAGCCGCCAATTGC
CGCGTGGACATATTTTTGTCTGTTTTACCACTCTAAAACCGTCCCAGTCT
TTTTTTCGAACCTATAGACAATAGAAAAAGGTGTAAAAAAAGAATTAGAT
CTAGTTTAGGGTGGTAAAACCTGTAAAACAAACAAAAAAATGCCCGCGTG
GCAATTGGCGGCTATGGTCGAAAAGGTGTATCCTGGTACTAAGATGCTTT
CGGAGACTCAAATGGATTGAAAAAATTTTGTCAATTTTGTAACTCTTTCG
GAATCTTTTCTACTGAAAGTAAATTTAATTTAGATGCTTTATTTAGGAGT
TTGGTGTTGGAAGCACCCTCAATGGCTGCACATTTCAATACCCACACGTG
AATGATATTTCTTTTTTTTTCTAGGAATCGAAGAGATATGGAGGCTCCAA
AAGTAAGTCTTTACATTCTTAAAACATACTCCTTCAGCTGGTACACAACG
TTGTTTCAACGTTCATCTAACGTTATACTGTACTTATCTCTAACAATCCA
AAAGTTCCCTTAACAATCAAAAAGTCGCTAAAAAGTGGCTATACCGCAGA
ACTATCCGAATTTTCGTGATTTGGGTTCTTTTGATTTTTAAGGAAACTTT
TAGACCGTTATAGGTAAGTACGGTATTGGCGTTGTGAAACATTAGGTAAA
CATCGAAATAACGATGTCTTCAATCTGGCTTTTCAATGTGGAATATACCT
TAACCTAAGTCAGAGATCACTGCAATGCACACTTCGTATTCAGAGCAATC
AATCTCATTTAAAAGAATTATAAAAAGGAACACTCTCTGGCATTGATTTT
GAGTTTTTTCTGAAACCATCGTTGAAAATCAACGGATCTTTAAACCAAAC
TATTTTTCATCATAGTTCCATCACTGCCATCCATTCGTGATACCACCATG
TCACGTGACCAATCACCGACCGCCAGTGTCATTCGGACGCGCGCCTCTAT
ACCACGTGTCGAACAATTAAAAGACAGGCCACGTGATCATAACAAACATG
GCGGCATTGCTGTAGGAGGAAATTCTTTCCGAAGAACGGACTTTTTTAAT
GATACGGAGAGCATGTGAGTTCTTAGTTGTTGAACGTACTGTGCTATTTC
AAAATGTTACTCGGGGTTATTTCATAAATCGTAGATTGTTTTTAAAAGTT
TATTAAATTTTGACGAAATTAGACATCACCATATCTGTCATTTTCAGTTC
ATATCTGTCAACACCAATACTAGACTCCTGATTATTAAATAGTTATCCTC
TAATATCGGTGACCTGTCCACCAGAAGGGCAGGGTAGGCTAGGCTGTTAA
CGTCAAATACTTTTTCCAAGCTGCCACCCCTGAACAAAAATTCGTTCTCT
TTATCATTCTTTTGAAATCTTCTTCCATTGTTATTCAGAAGTAGCCGATA
CACAGCGACGCGTGACCCAATCTCCTTTCCCTCAACCGACAACGACCAAA
TGAGCGAAACAAGCAGTGTTGTCAATCTACGCATGCGTAAAGCAAAGAAA
AACAACATTATAAATCACTATAGTAACAGCAATAACAACAGACCAGCTTT
ACGGAAAAAAGAGACTTTTACGTTCCCGAAAACAGAACAGCCAATTTTAA
ATGAGGAAACGCTCGTTCGAACGCGCGGAAAAACATTCCGCGTGTCCGGA
AAACCCGAAAGTGATGAAGAGCGAAGTCTGGTAGTCGCCAAAATCAACCA
TAAACATCTAAAGAAAAGGAGCTTCGAAATTGATACTGCTTCTTTGAAAG
ATTCAGAACTGGCCAGTACCCGGGAAGAAGTCGAAGGCCGGAAGAGGTCC
GCATCAGCCGGTATGATTCGAGAAAAAGTGAAAAAGCACCAAACGAGGAA
TGAGAAACTGCTTCCTAAACGAAACAATATGGTGATGACGTCAGAGAAAG
AATCAAAGCCTACTTGGAATAATAATTTCTCAAGCAAAAAAGGTAATTTT
ACCCTGTTTCGTATTTTCATAATAGCCAGTCTTTCTTTTCATTACAAATT
GATTCAGGCTAATTAAAATCAAGCCTTTTGCAAGTGAATATACTTTATAG
GAAATCTGTTCCGTGTTTTGCGATGCATCCACAGGGCTTTCCTTAGATTC
ATTATCATATGAATTACGTCATGAGCGACGCTTACCTCGTTGTCAAAATA
TTGCTATGGTAATTGATTCCCAAAAGAGTTCATAGGAAGTTTACCGTCGT
TTTTTATAAGACTCTCATTTCCGCACTAGGATTCCCCTTGCCAGTTTTCT
AGCGGAGAAAGACCAGGACTTCGGGTAGTTAAAAATGAGCTTCGGAAAGC
TAGGGAGTTTCGTGATTAAAGACAAGATTTTCCGTACCATTAGAAACAAA
CCCTTTCCAATCTAATGCCGGTTATCCCAGGAAAAATAGTGTAAAGATTC
CGGAAAAGTGACAAGAATCTTAGAGCGGAAATGGGAAGCTTATATAAAAA
CGACGGTACGTATTTTAACAAAAGTAACACTTGAATAATCAATAGATTTT
TTATAATGGTTTCAAAAAGAGGCAGTCGTTGCACTCAAAAATAATTATGA
GAAAGCCTGTAATAAAAAATGCTATCTTTATAATTTTCCAACAGCAAAAG
AAGCAAATGCTACAACAACAAACAAGACAGGAACACGTTTTCGAAGGACT
GTCGATAATCTACCCACATTGAAAAAAGCAAAATTCTCACAACATGGAAA
CATGCTCATTGTTGGTGCAAGTGATTCATTAGCGGTCAGTGGGACATCTT
TTATACCGAAACAAACACAACCGGGCTTTGGGCGAATCTGA Coding sequence (CDS) from alignment at sc0000043_pilon:422389..427579- >XLOC_008580 ID=XLOC_008580|Name=XLOC_008580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3282bp|location=Sequence derived from alignment at sc0000043_pilon:422389..427579- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCTAGATGGGAGCAAGAAGAGTTGAAGCACCGTACGCGCGAACCTGA
ACGCGTCAGCAAAGCGAACGTACGACAAATCTTCAGTAAGAAACCTCGAA
AATCGATGAAAAGTCGATTCGCATACGATCCATTCGATATCGAGCGAAAA
GACGATGATGATGAAAAATCATCGATCATTTCTCGAAGCTCCTTGCGGCC
GCTTCATCATCAACGTGAGCCCGCGGACGTGATCGCGGCGCGTGATGAGT
TGGATAACATCTTACAACAACAAGATGAGATTGAATGTCGTAAGAAAGAA
ATCAATGATCGACTTACGCGACAGACCCACGAAAACCAGGGCTTGGAGGA
AACAATGTTAAGAAGAGCTTCTAACGAAAATCACCGTGAAGTGATCAAAA
GTCTTTGTTTTCTTCATGAGTATCAAATAAGTTTTCTAGATGGGAGCAAG
AAGAGTTGAAGCACCGTACGCGCGAACCTGAACGCGTCAGCAAAGCGAAC
GTACGACAAATCTTCAGTAAGAAACCTCGAAAATCGATGAAAAGTCGATT
CGCATACGATCCATTCGATATCGAGCGAAAAGACGATGATGATGAAAAAT
CATCGATCATTTCTCGAAGCTCCTTGCGGCCGCTTCATCATCAACGTGAG
CCCGCGGACGTGATCGCGGCGCGTGATGAGTTGGATAACATCTTACAACA
ACAAGATGAGATTGAATGTCGTAAGAAAGAAATCAATGATCGACTTACGC
GACAGACCCACGAAAACCAGGGCTTGGAGGAAACAATGTTAAGAAGAGCT
TCTAACGAAAATCACCGTGAAGTGATCAAAAGTCTTTGTTTTCTTCATGA
GTATCAAATAAGGAATATGGAGCTTGAATCTATGGCGTTGATGAAAGAAT
TTCTTTTACAACAAAAAGATTTAGAGACACAGCGAAGTGATATGAGAAGA
CGTCTGGTTGATGAAGTTGTTGATCTACAGAAAAATGTCATCACTGGAAT
ATGGAGCTTGAATCTATGGCGTTGATGAAAGAATTTCTTTTACAACAAAA
AGATTTAGAGACACAGCGAAGTGATATGAGAAGACGTCTGGTTGATGAAG
TTGTTGATCTACAGAAAAATGTCATCACTGAGAACGAACTGGAGTACCCT
TCAGATATTTCCTCCATACATCAATTATACAAAGAACAAGTTCTCAAAGA
CACTGCCATGCTCTCTTCTCTACATATTAGAACGAACTGGAGTACCCTTC
AGATATTTCCTCCATACATCAATTATACAAAGAACAAGTTCTCAAAGACA
CTGCCATGCTCTCTTCTCTACATATTGAATCGAAGAGATATGGAGGCTCC
AAAAGAATCGAAGAGATATGGAGGCTCCAAAATTCCATCACTGCCATCCA
TTCGTGATACCACCATGTCACGTGACCAATCACCGACCGCCAGTGTCATT
CGGACGCGCGCCTCTATACCACGTGTCGAACAATTAAAAGACAGGCCACG
TGATCATAACAAACATGGCGGCATTGCTGTAGGAGGAAATTCTTTCCGAA
GAACGGACTTTTTTAATGATACGGAGAGCATTTCCATCACTGCCATCCAT
TCGTGATACCACCATGTCACGTGACCAATCACCGACCGCCAGTGTCATTC
GGACGCGCGCCTCTATACCACGTGTCGAACAATTAAAAGACAGGCCACGT
GATCATAACAAACATGGCGGCATTGCTGTAGGAGGAAATTCTTTCCGAAG
AACGGACTTTTTTAATGATACGGAGAGCATAAGTAGCCGATACACAGCGA
CGCGTGACCCAATCTCCTTTCCCTCAACCGACAACGACCAAATGAGCGAA
ACAAGCAGTGTTGTCAATCTACGCATGCGTAAAGCAAAGAAAAACAACAT
TATAAATCACTATAGTAACAGCAATAACAACAGACCAGCTTTACGGAAAA
AAGAGACTTTTACGTTCCCGAAAACAGAACAGCCAATTTTAAATGAGGAA
ACGCTCGTTCGAACGCGCGGAAAAACATTCCGCGTGTCCGGAAAACCCGA
AAGTGATGAAGAGCGAAGTCTGGTAGTCGCCAAAATCAACCATAAACATC
TAAAGAAAAGGAGCTTCGAAATTGATACTGCTTCTTTGAAAGATTCAGAA
CTGGCCAGTACCCGGGAAGAAGTCGAAGGCCGGAAGAGGTCCGCATCAGC
CGGTATGATTCGAGAAAAAGTGAAAAAGCACCAAACGAGGAATGAGAAAC
TGCTTCCTAAACGAAACAATATGGTGATGACGTCAGAGAAAGAATCAAAG
CCTACTTGGAATAATAATTTCTCAAGCAAAAAAGAAGTAGCCGATACACA
GCGACGCGTGACCCAATCTCCTTTCCCTCAACCGACAACGACCAAATGAG
CGAAACAAGCAGTGTTGTCAATCTACGCATGCGTAAAGCAAAGAAAAACA
ACATTATAAATCACTATAGTAACAGCAATAACAACAGACCAGCTTTACGG
AAAAAAGAGACTTTTACGTTCCCGAAAACAGAACAGCCAATTTTAAATGA
GGAAACGCTCGTTCGAACGCGCGGAAAAACATTCCGCGTGTCCGGAAAAC
CCGAAAGTGATGAAGAGCGAAGTCTGGTAGTCGCCAAAATCAACCATAAA
CATCTAAAGAAAAGGAGCTTCGAAATTGATACTGCTTCTTTGAAAGATTC
AGAACTGGCCAGTACCCGGGAAGAAGTCGAAGGCCGGAAGAGGTCCGCAT
CAGCCGGTATGATTCGAGAAAAAGTGAAAAAGCACCAAACGAGGAATGAG
AAACTGCTTCCTAAACGAAACAATATGGTGATGACGTCAGAGAAAGAATC
AAAGCCTACTTGGAATAATAATTTCTCAAGCAAAAAAGCAAAAGAAGCAA
ATGCTACAACAACAAACAAGACAGGAACACGTTTTCGAAGGACTGTCGAT
AATCTACCCACATTGAAAAAAGCAAAATTCTCACAACATGGAAACATGCT
CATTGTTGGTGCAAGTGATTCATTAGCGGTCAGTGGGACATCTTTTATAC
CGAAACAAACACAACCGGGCTTTGGGCGAATCTGACAAAAGAAGCAAATG
CTACAACAACAAACAAGACAGGAACACGTTTTCGAAGGACTGTCGATAAT
CTACCCACATTGAAAAAAGCAAAATTCTCACAACATGGAAACATGCTCAT
TGTTGGTGCAAGTGATTCATTAGCGGTCAGTGGGACATCTTTTATACCGA
AACAAACACAACCGGGCTTTGGGCGAATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:422389..427579 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1447-1641:196 |
| Aaloc | 892-1443:1403 |
| Aaloc | 694-888:1925 |
| Aaloc | 664-690:2418 |
| Aaloc | 568-663:3261 |
| Aaloc | 433-564:4026 |
| Aaloc | 1-429:5192 |
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