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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:523185..529643+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008573 ID=XLOC_008573|Name=XLOC_008573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6459bp|location=Sequence derived from alignment at sc0000043_pilon:523185..529643+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc
tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG
GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC
TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA
ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa
aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC
AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC
ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC
ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC
AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGGTGA
AACTCGTTTTAGCTTTTAAACAACTTTAGACACTTTTGTTTTGAATCGAA
TTTTTAGAACAAAAATTTAGATTATGTAATAAGACAAGCCATTGATCCAG
CAataaattttaaggtttttagaAGAAAACTACGTAGAGGCGTAAAAATA
TTATAACTTGATTAAATTAGTGTATCGGTGCAGTATAGCTGGTAGTAAAA
TGATTCTTCCCTATACGAATAGATTTTGCTAAATCAACTTTTATGTTATA
CATTTCAGTGTCGTAGGAAGCCTTTTGATTTtcttggggggagggggtga
aaGTTAGTGACACCTCAAAAGCCAACTGTTGTTCAGAACGAAGAGCGAGG
AAATTCTGAATATTCACGGTCCTAGAATGCCAGAAATCttactcaaaaaa
tgaaaaagatgaaaaattcaaaGGAATATTACTCCAATTCTCACAGtaaa
acatctccaaaaaaattatttggggcAAAGCCTCCCtgacccaccccctc
ccccggTAGCTACAGCACTGCATTTAATATTGGAAGGAACTCTATTCTGC
TTGTTTTTCCGAATTTCAAGCAACCTAAACCTGTCAAATCAATTCATATT
CTAGAATCTTCCGAGCATATTTCTCTGATGCACAGCCAAAGATTGTTAAA
AGAGAGCAAAGCGAAGCTTAGTGGTTACGAAAATCGCGACCAAAATGAAA
GTGGtaagaattatattttttggcatttatTGGTATATCATgtattccgg
gggggggggggtacttggaAAAGAATTGAAAACTTTTCGAATTTCAGACC
CATTCAGGGTGACtttttttCGCTCGCTCGCCAATTTTTCGAATCTCATC
GGCACACCTCCATCGGTCCTCAAGGGTAGTACTCCTGGATGTATTATTCA
GAGGAAACAGTAAAAGTTTAGGGAAACTACCGTCAATTGGGGGTAACTTG
CAATTTACCTGTCAAACATGCAATCGCAAAACGGACTACCGTATTATTGC
TCTTCCTTGTGAATGACAATTTTTAAAACGAAAGTAGATTTTCCGAGAGC
GAAAGAAAAAGTCTACTCTGCGGAGAAGTTTTGTTTGGTCACGTGATCTC
GTATTCTTTTTGTAATTGGTCTTTGAAACTTGAACGCCACGTGGGTCTCT
ATCGGAAAATATTAGtgagaaagtgaggcaccccgcggtgcagcgtggta
tttcaaatgaaaaagtgctaactagaactagaactttATAAAGacagttc
ttataattttagtAATAATGACAatggttttcaactttttaaattgtCTT
TCACGAATGTTTTACAGAGTCTCTTGATAATCGACAGTCTTTAATCGTGA
AGGATATTTGCAGCAGAAAAATCATTGGATAAGAAGAAATCCAAATTTAC
GGGTTTGCAATTAAAGAAGTTAAACTTCACATCAACTTTTAATGTTAGGG
TACAGAGATAGAGCAAGGTATTTTTCAATGTGCTTTATCCAGCTTCGCTA
TTACATATCCCTGCCTCgatcaacaaattttttttgaatgtttttttcat
ttaggATGAAAGCTTTTCGAGGCAAAATTCGAAGTGTTTAAAATATGTTT
TGCGAGAATTTTATGAATTCAAGCTAATTTATGTATCTGATTTCTTAATA
GAAGACGATGATGTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGA
TGATGAAATCGAAATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaa
atagaatcgGCAATTCCATCAAAACCGGTAAATTCTATACTATACATTTT
ATATAGAATTGTTTTTATTCATactttaaatttaaatattcCTTGAGCTT
TTTTGGGCCCCTTCAGGCCCACGTGTTTTAGGCAGGGCAGTGTGGTGTGT
AGTGATGTGGCTTTAAGTCAATCTTTTTCTAATTCTAATAGCTAGAGGAC
ATAATCTAGTGTAGCTGAACCaaggtttttttatattttcgttcactcaa
tgtcaaaaaagtgaattttgggcattttttttGATACtgtaaaagaaatt
atttcaaaatcttttgtgtTACAACTTAATGGGCGTTTTATTTCAGTCAA
CTCAGGGGGCTACGCCCTCCTGTATGGTCCTTGTCAGATATAatcgacat
tggcacttaaagtgTTAAAAGAAAGTTAAGTGTAAACTTCCTTAACCTGA
GTATCAGAGGACAAGTTTTCTGTGAAAATATTGACCTCTGACGACAAATG
CTATGATTTTCATCGCGCATGCCCGAACCATTTGCAAAATCTAATTGTTA
TCATGTCAAAGAACTACCTAAGAATTATGGGATGGAGAGAAttcatacac
ccctgtctcagtgacctgGTGGGAAtttttttGCTAGTGGGGATAAATAA
AGAGACATAAAATCCAATGGGGTTAtcaaaaacgggtttttttccactgg
ggatacgaaattctattgttctttatTCGAAATATTGGTGGGGATGAGAC
ATTTAAGTCGATCagaatttagtttttttacgattttcaatggggatggg
CCTTTTTCTAGTGGGGACGAATTTCTATGCTATTTTTCCGCCGGTGATGA
CTTTTTGGGCCTGTATTTCCAGTGGGTAGGGGGTCCCACCGGttctgtga
aacaggggtgtattcaTTGCCTTTACTTGCTACAGTCTTATTTAGCAAAT
AATAAACCTTGTGCTCAGAACTAAAAGAATTACACCATTAGAAAgctctt
gattttctaaaaattatgaTATAAAAATCGCATCTTGAACAAAACAAAAG
ACTTGACATTATTTTCTTAAAGCTTTCGGTCGTGTTCAGatctgaaagtt
taagtttaaggtttaagtagtactttgttgatatgggaattcaattataa
tcacttttcttttgtcatcatcgattggcgatctcgaggaatctcctttc
ctaacttgaacGTTATATGTATGAAATAAAGACCTTTCTTAATTCCCTTG
GGAATATGTTTTTTCATACCAAGAGCCTTTAACCTGATTGGCCTTATGGG
AGTATATGTGCAAGAAAAACATATATGCCATTCTCAAACTAagaaactaa
agtctgtccagatataattggcagtggaaacaagaatgcctgtaactttt
gatagtcaaatataattatagaaattttttttgcttgttttagagaatca
aaagcgctatatttgattgtattcttggtttaaaaatttcaagattttta
gcggttaaatttgcgattgcaaaaattgagctttttatctacttatgcta
taactttcatttttacatcaaTGGCAGTTCAACCTTagattaagaagttt
gttaaatttcaaggcaaacagaaaagtccttcggaagatatgggacccga
aataccccttggtagcacttttctgtgaaatatcaaatctccaacttatt
gctaaaaaacgggggtagtgatatcaTTGATATAACAGTTTTtggatcat
aacacattttatgatctttttaatgacctcatagccaaactgtgtttagt
gttttgggaattagcaaacttctttaatgactttaaaataacaaaggcaa
tataagttcatgcttatcttttcaataaaaacaattatactgtgatttca
cttcgtttcgaaataatcaatgataccaataataccaatgcaccgaaaca
ttttccaacttttaattgcactgttcaaaaaagataacacaacccccgtt
tttagtaataagttggagatttgatatttcacagaaaagtgctaccaagg
ggtatttcgggtcccatatcttccgaaggacttttctgtttgtcttcaaa
tttaacaaacttcttaatctaaggttgaactaccactggtgtaaaaatga
aaattatagcataagtaggaaaaaagctcaatttttgcaatcgcaaattt
aaccgctaaagatcgcgaatttttcaaccaaaaatacattcaaatatagc
actattgattctctaaaacaagcaaaaacaatttccatgattatatttga
ctatcaaaagttacaggcattcttgtttccactgccaattatatctggac
agactttagataCTACTATCTCTATTTTCTCGCGTATTTTGTTATAACGT
ATTTTTCGTCCCTTAAGGGTGTATTGGCTTATATCTCTTTATAGAAATTA
CTTTTAGCTGGCTCAAGTTTACTTCCATTTtaacaagaagaaaaatcagc
AAATCCTGGGTCGAACTGGgtttttttaaactgtttttttttaagagcgA
AGCGATGTCGCGCCAGCGGCATGCGACGCTGGCTTGCCAGCTAGTACata
ataattttcttatttaggTTATGGCAAGAAGTTTCAAGGTGAAAAGAAAA
GAACGACCACTGTGCTGCCTGAGCCAAGCAAGTTTTTCATAttacatttt
catattttgaccaTTAGTAAACCTAGAATTACTTCGGGAAATGAGGATTC
AGAGTGACTCTTAAGAGACTTTTATGGACTTTTAAGGCgaacccaaaaaa
ttttttgtttccggtccaccgggtgacgaaaaaagaCACTCTCTCGGCCG
gccgcgaaaaatttttttgtgctaaatttcgatcccaaaactcgattttt
taaagcactcgtaGAAGTTAAAAGGATGGTAtttttttGCCTTAAATCTG
CAGTAATTTGACACCAAAATGCaaattttgtaagaaaaacTTTGAGTACG
ATGTCAAAATAATATTCTAATAATTGCCTGAAAGAGGGCCGGAAATTTCT
GGGTTTTGATACTTTTAAGATCGGCCTGTAAAACTCCTAttgtttttgac
ttgaaattttgagctattgTATTATAGGTATAATTTAAATTTACCAAATG
TTCAACTTTTActggtaaattttcaaacagcTCGAAGTCCATCGTGggat
aaatttgtctttgtaatcAATCATTACCTCTAATCTCTCCATAGATCCTA
TAAAGATCGAAGTCGAAATTCCGAAAGAAGAAGAACTATCTGACTCTGAA
TTACCTTCATTTCCACAACCGTATTCTCCATCGACCTATTTTCcagagga
agaagaagaagaagaaacagaaagtcaagaagCTATTTCGGAAACAGTCC
AGCCtaagtttcaaagaaaaattccGCGGATAATTTGGGAAGGAAAGTCA
GTAAATGAGGTACCAAACATTCCTTACGACATTGATGACATAAAGGTTTA
CCATGTCCAAAGCTCTGATGGTCTTTTACCGCAAAAATTGAGAGACGGTA
GGAATTGGAAGCCTGATTCCAGAACAAGTTGGGCTGGCTATAAGTCCGTT
CGATATCGTGAATGCAGAGGTGGATTTACTTGCTCCAATCCTTCATGTCC
TTATGTTAAAAAGTTTGGAAAATCAAATACTGTTTCGTTTGATAAAAATC
ATTATTGTAAATTCTGTCAAGCATCTGGGATTTACGAAAGGTGCGAAGCA
AGGAAATATATAGCCTATACACACAATCCTAATGAAGCTTATGTGTACCA
CTATGGCTTCCATACTTGTGTACCAAAAGAAATCCATCAGGCTCCTATCA
GCGAAATCGTACGCGAAGTTCAAAACAACCCATCTGTTCGACCTACTGAA
ATCCAGACAAATTTGATTCTTTCAGCTATCCGGAATAGAGATTCCTGGGA
TGAAATCATGCGTACCGCGGCACAAGTGGCAGATACAAGAAAAATTTCTA
ACGAGAAATCAAAGCAGAAGAAGGTTGTTTATCCTTtaggtgaaaatttc
aagggtGTATCTGATTTGAAAGAATTCACCGACACAAAGGACAAATTTTT
GATATACGATATCAACCGAAATAAACAATACATTTTCAAAAGCTCAATGG
ATTCtttgaaaattgcaaaagaTATGTGCGAATTAGACAACGTTTTGGAG
AATGAGTAT Coding sequence (CDS) from alignment at sc0000043_pilon:523185..529643+ >XLOC_008573 ID=XLOC_008573|Name=XLOC_008573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3288bp|location=Sequence derived from alignment at sc0000043_pilon:523185..529643+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGGTATTAACTTCATTTCGCatctttattttaatttttctttcagttc
tGGCACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTG
GTGATGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGC
TCCCAAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGA
ACTCAAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaa
aaattgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCC
AACAACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTC
ACTCTCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCAC
ACACGATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTC
AAACGCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGAACG
GTATTAACTTCATTTCGCatctttattttaatttttctttcagttctGGC
ACAGAACCACAATTTCCTTGCGATGATCAAATAGTCGATGTACCTGGTGA
TGGGCATTGTTTAATATACGCGTGGGAGCTCTGTCTACATGCCAGCTCCC
AAAATGACATCTCATATATGAGTCTCAAAGATATGCTCGAGAGAGAACTC
AAATCTAATAAAGAGACATacatgaaatttttgatgaaagcttcaaaaat
tgatTATGATATAAATGTATTGAAATACATTTACAAGAAAACCTCCAACA
ACGATCTATGTGACATTCTGATATTGGCTCTCAGTAATGCTACCTCACTC
TCGTGCATGATATGGGAAGAAAGGAACAGACGTTTCACAAGAGCACACAC
GATATTCCCCATCTCTGGATCTTCCAATGACAGAATACATGTTCTCAAAC
GCAACGATCATTATTTGGCCATCGTGGACACAAACAATAAAGACGATGAT
GTTATAATTGTGCGAGAGGTAAAACCGTTGAAGATTGATGATGAAATCGA
AATCACCAAAGAAGTTCCAGCTaatcctgaaaataaaaatagaatcgGCA
ATTCCATCAAAACCGACGATGATGTTATAATTGTGCGAGAGGTAAAACCG
TTGAAGATTGATGATGAAATCGAAATCACCAAAGAAGTTCCAGCTaatcc
tgaaaataaaaatagaatcgGCAATTCCATCAAAACCGgTTATGGCAAGA
AGTTTCAAGGTGAAAAGAAAAGAACGACCACTGTGCTGCCTGAGCCAAgT
TATGGCAAGAAGTTTCAAGGTGAAAAGAAAAGAACGACCACTGTGCTGCC
TGAGCCAAATCCTATAAAGATCGAAGTCGAAATTCCGAAAGAAGAAGAAC
TATCTGACTCTGAATTACCTTCATTTCCACAACCGTATTCTCCATCGACC
TATTTTCcagaggaagaagaagaagaagaaacagaaagtcaagaagCTAT
TTCGGAAACAGTCCAGCCtaagtttcaaagaaaaattccGCGGATAATTT
GGGAAGGAAAGTCAGTAAATGAGGTACCAAACATTCCTTACGACATTGAT
GACATAAAGGTTTACCATGTCCAAAGCTCTGATGGTCTTTTACCGCAAAA
ATTGAGAGACGGTAGGAATTGGAAGCCTGATTCCAGAACAAGTTGGGCTG
GCTATAAGTCCGTTCGATATCGTGAATGCAGAGGTGGATTTACTTGCTCC
AATCCTTCATGTCCTTATGTTAAAAAGTTTGGAAAATCAAATACTGTTTC
GTTTGATAAAAATCATTATTGTAAATTCTGTCAAGCATCTGGGATTTACG
AAAGGTGCGAAGCAAGGAAATATATAGCCTATACACACAATCCTAATGAA
GCTTATGTGTACCACTATGGCTTCCATACTTGTGTACCAAAAGAAATCCA
TCAGGCTCCTATCAGCGAAATCGTACGCGAAGTTCAAAACAACCCATCTG
TTCGACCTACTGAAATCCAGACAAATTTGATTCTTTCAGCTATCCGGAAT
AGAGATTCCTGGGATGAAATCATGCGTACCGCGGCACAAGTGGCAGATAC
AAGAAAAATTTCTAACGAGAAATCAAAGCAGAAGAAGGTTGTTTATCCTT
taggtgaaaatttcaagggtGTATCTGATTTGAAAGAATTCACCGACACA
AAGGACAAATTTTTGATATACGATATCAACCGAAATAAACAATACATTTT
CAAAAGCTCAATGGATTCtttgaaaattgcaaaagaTATGTGCGAATTAG
ACAACGTTTTGGAGAATGAGTATATCCTATAAAGATCGAAGTCGAAATTC
CGAAAGAAGAAGAACTATCTGACTCTGAATTACCTTCATTTCCACAACCG
TATTCTCCATCGACCTATTTTCcagaggaagaagaagaagaagaaacaga
aagtcaagaagCTATTTCGGAAACAGTCCAGCCtaagtttcaaagaaaaa
ttccGCGGATAATTTGGGAAGGAAAGTCAGTAAATGAGGTACCAAACATT
CCTTACGACATTGATGACATAAAGGTTTACCATGTCCAAAGCTCTGATGG
TCTTTTACCGCAAAAATTGAGAGACGGTAGGAATTGGAAGCCTGATTCCA
GAACAAGTTGGGCTGGCTATAAGTCCGTTCGATATCGTGAATGCAGAGGT
GGATTTACTTGCTCCAATCCTTCATGTCCTTATGTTAAAAAGTTTGGAAA
ATCAAATACTGTTTCGTTTGATAAAAATCATTATTGTAAATTCTGTCAAG
CATCTGGGATTTACGAAAGGTGCGAAGCAAGGAAATATATAGCCTATACA
CACAATCCTAATGAAGCTTATGTGTACCACTATGGCTTCCATACTTGTGT
ACCAAAAGAAATCCATCAGGCTCCTATCAGCGAAATCGTACGCGAAGTTC
AAAACAACCCATCTGTTCGACCTACTGAAATCCAGACAAATTTGATTCTT
TCAGCTATCCGGAATAGAGATTCCTGGGATGAAATCATGCGTACCGCGGC
ACAAGTGGCAGATACAAGAAAAATTTCTAACGAGAAATCAAAGCAGAAGA
AGGTTGTTTATCCTTtaggtgaaaatttcaagggtGTATCTGATTTGAAA
GAATTCACCGACACAAAGGACAAATTTTTGATATACGATATCAACCGAAA
TAAACAATACATTTTCAAAAGCTCAATGGATTCtttgaaaattgcaaaag
aTATGTGCGAATTAGACAACGTTTTGGAGAATGAGTAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:523185..529643 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-1644:5497 |
| Aaloc | 622-678:4870 |
| Aaloc | 499-618:2157 |
| Aaloc | 1-495:1 |
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