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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:466169..469223+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008496 ID=XLOC_008496|Name=XLOC_008496|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3055bp|location=Sequence derived from alignment at sc0000210_pilon:466169..469223+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGT
AGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGA
AGAACGAATTTACTGAGGTatgtattgaaagtttgtggATACATTGTAAA
GAGATACTTTTCATAAATATCAAATCTGGGTTTGTGTTAAGATGTAAAAT
TTATACCGGGTGCGATATTTGACGtttttgaaagtaactttttaattcat
tttaatATAAGTTTTGTTCCAATGAACCAAATTTATTAAAGACCCATCAA
AGTTTTAGTTTATCCTTTCTCTTTCCGAGagaaaatgattcaatttttaa
aactctAGAAGTCAAGACAATTTACTTCAGAAAggtaaactttttgtttt
ttgtggcgcacccggtatccCATTTTTTGAACAATCATAACCCTATAAaa
cgattttagaaaattacaTGCTTTAGATTTCAAAGATATGAAGCTCATTT
TCATCTCCTCATATAATATATCATAATCATAAGCCAAAATTTACTAATTC
TTACAAAATCTTTgtatattcttttctttttctttagtaTTATGATCCGA
CCATGGAGGAAACTTATGAAACAGAGGTATGTTTTTGATGAGACACCTGA
CTTTCTGTCTTGCCTACtcttattttgtattttttataagcaactcaaAT
TTTCGGTTCAAGcctggggttgcttagcattctagtccaactttaaaaaa
attgctttgaccACCATTGATGTTATAccatatttttgcattttaggGCT
ATTGTTTGCCATGTTAGATTCTGTAAAGAGCTTTCACTTTACGAGAGAGT
GGGGGAAAAATCGGCCAATTGGATGCCTCGAACCTTAGCAACCTTtggtt
ttaaagaaatttgtacTCTAGTATCTTTCTAACATTTCAGATCACTTACG
AGGGAAAACTCCACCAGGTGGAGATTATCGATACAGCAGGTCAGGAGGAG
TTCACTTCATTTTTGGACTCTTCGCTCTCTACCGGCGATGCGTTTATGAT
TTTGTACGCCATCAATTCATTGTCCAGTTGGAACGACTTGAAGACTCTGA
GGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAATGCGGGACACAGGATA
CCTATGATCATTGTCGGTAATAAAAAGGTaacgaacattttgaaaaaaaa
tgctaTATCATGTGGAAACCACGCCTTAATTTTTGCATAAATATTGGCAT
AATTTTTCGCTCCTTTGTTCTTATAAAACTAATCTACTCTTGCAGAATGT
ATGTATTCTGATCAAGATTAAAGTTCAATAAGAAAAGACTTGAACCATTA
TTTTATTAGTCAATTCTCAAATTTGAGACCCATATTGGGCTCTTCCAAAA
AAAAATTGTACATGGGGGTGGAGGATATTTTGTCCGGGAGGTAGCAAAAA
ATCATCAAAATttgccttgtccgggggtaaatttgctctgtccaggggta
atttggggtgtccggggggtcagcagatgcttgtccggggggtaaaactt
attgtccggggggccaaaagtcaccctgttcggggggtaaatcactaaaa
attgttatatcctccaccccccatgtacaatttttttctggaagagccca
tttcagCTATTTGTGGCGTGTTTTCTAGGAAACATCCccgtttttgccag
tagtgaccaatttaaataaaaaactgtttgaaatTAAATGAATAAAAACC
GGGTTGTTTccggagaaaatattttttcatgaatagcACGAATTGCTCCC
AATTTGTTCTTAATCATTAGTCAGAAATGAGCCACATGAAGCTGCTCTTA
TAAAAATGATGTATATTTCACTTATCTTTCAGGATTTGGACAACGATCGA
GACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTTGCGTGTCCC
ATACATTGAAACATCCGCTAAGGTCTGTTGTTAAAGTGTATCTAGATaca
attggcagtggaaacaagaatgcctgtaacttttgttAGTCAAATATAGT
TATGCTACGACGTTTGTTTTTAcatcagtggtagttcaaccttaggttaa
gaagtttgttaaatttcaaggcaaacggaaaagtccttcggaagatatgg
taCCCTTTTCTGTGAAACTCCAAATCTCCAGATTTTTAAtaaattgttga
ttttttaaaacatgCAAAAAGGATTTCcacaattatatttgactaacaga
agttacaggcattcttgtttccactgccaattgtATGTTGATACACTTTA
GTTTGACTTATTCGTGAGATGATCCCCAATACCGACCTTTCAGATCTTAA
AGGggtaatcagatggtttgagatttttggcCTGCGGAAACTTTCCTAAT
AGCGCTGACTCATTCCTATAAGCATTTTTGCCTGTTTTTGCCTTactttt
ttccaaattcgaGACATCGCAATTTAAAAGTTCTGAACTAAATAAGTTCG
CACATGGCTCTTACGTCAAAATTGCTGTTGCTTCTTtactaaaaagtcaa
aaacttgttATATctatttaggcaaaaatattttgaggttttgctcGGGA
CAATAGAAGGTTTCCACAAACCAAATATCTTAAACTACCTGTTTTAAAAG
TGGTTAAAAGTTAACTTAACTCTATAAAGACTTCAAAGAGTAACTCTAAA
GTTAAGCATGTCTCggtaaaaataacgaaaacaTTTGAACCGTCGCAATA
TTTATTCTTTCAGATACACCCTTTTTTAATTCCGAATCTTATACTCAGAA
TCAgcttatttaaaatattttccttgtTTCCTTGTTTGCTTTCAACTCCA
TTCTGGATGTatcttgttggaaagataattttgagcgaagaaatattata
tttttctctctTAGACGGGATACAACGTCAAAGAAGCTTTCCATCTTATC
ATGTCGGAGATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACCAA
GAACAGACCGTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGATTG
TTTAA Coding sequence (CDS) from alignment at sc0000210_pilon:466169..469223+ >XLOC_008496 ID=XLOC_008496|Name=XLOC_008496|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000210_pilon:466169..469223+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAAATGTTACGAATATGCGT
AGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGTCACTATACGCTTCCTGA
AGAACGAATTTACTGAGAGAAGAAGTGTCATCTGCCCTTCTGCCGCCCAA
ATGTTACGAATATGCGTAGTGGGATCTGGGGGCGTGGGAAAGAGTTGCGT
CACTATACGCTTCCTGAAGAACGAATTTACTGAGtaTTATGATCCGACCA
TGGAGGAAACTTATGAAACAGAGtaTTATGATCCGACCATGGAGGAAACT
TATGAAACAGAGATCACTTACGAGGGAAAACTCCACCAGGTGGAGATTAT
CGATACAGCAGGTCAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCT
CTACCGGCGATGCGTTTATGATTTTGTACGCCATCAATTCATTGTCCAGT
TGGAACGACTTGAAGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGG
CAAGAATGCGGGACACAGGATACCTATGATCATTGTCGGTAATAAAAAGA
TCACTTACGAGGGAAAACTCCACCAGGTGGAGATTATCGATACAGCAGGT
CAGGAGGAGTTCACTTCATTTTTGGACTCTTCGCTCTCTACCGGCGATGC
GTTTATGATTTTGTACGCCATCAATTCATTGTCCAGTTGGAACGACTTGA
AGACTCTGAGGAGTAAGATTTTCCACGGTTCGGAGGGCAAGAATGCGGGA
CACAGGATACCTATGATCATTGTCGGTAATAAAAAGGATTTGGACAACGA
TCGAGACACGAGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTTGCGTG
TCCCATACATTGAAACATCCGCTAAGGATTTGGACAACGATCGAGACACG
AGTGAGGAAAGTGCTCAAGAGTACGCCGACTCGTTGCGTGTCCCATACAT
TGAAACATCCGCTAAGACGGGATACAACGTCAAAGAAGCTTTCCATCTTA
TCATGTCGGAGATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACC
AAGAACAGACCGTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGAT
TGTTTAAACGGGATACAACGTCAAAGAAGCTTTCCATCTTATCATGTCGG
AGATTGAACGAATACGTCCCGACCTGTTAGTGAAACGGACCAAGAACAGA
CCGTCGACGAGTAGCGATCCGAAGAAAAAAGACTGTAGGATTGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:466169..469223 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 484-624:2915 |
| Aaloc | 394-483:1883 |
| Aaloc | 157-393:941 |
| Aaloc | 118-156:588 |
| Aaloc | 1-117:1 |
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