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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000433_pilon:86681..90900+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008469 ID=XLOC_008469|Name=XLOC_008469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4220bp|location=Sequence derived from alignment at sc0000433_pilon:86681..90900+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCGAAATAACCTCGAGCTAGCGCTGGTGAGTAATTTTagataata
ttttttattattattacacTTGCTGATTCTCCTGTTCACCAGGTAGCCCT
GTAGAATAGCTGTACATCCTGAATAAAGAACACGTCGCACTCCGttaaaa
aaccatttttatGTAATTTGTCGCTTTTCCACTACAATGTCCagcccatt
gagtttaaagcccgaagggctagagttcaatctctaacttttttcaggca
agaaaaagtgacgacagattgaatctagcaattcctttgtaaAGCTCTTT
CACGATAATACGGCAGCAGTTGGAACTTTCCCTAACCGGAAATAACCTCA
ATATCAGATTATCTTTCTCTAAACCCCCCTCAATTTTAAGACTATGTAAT
TGAAAATTGCTACGCCACTAACCACTTTTTTAATTATGTCTATTTATCAG
GAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGGATCAGTGCCA
CATCAATCATCATCTCTACCAGGTAATTCTATTttatctaaattttgaaa
aaagggaTCTCAAATCGTAATTTCGGAAGGGGTCTTCAGATCTTATGAAT
ATAAATATTTattattcttatcaaacaaTCCAAACGGCCGATTTGTGATT
TTAATCAACAAGACAGTTGTTAGCGGAGCAAACTTGAGTATCATCTTTAA
TTATCTACGCCTACAGCCTGAAAGCTCTCAATGGTTGCCAAAAGTGTTTT
TCGATAGATTTAAACCTTAGCTGAGAGGCAAAAGTTTTAAGCCCTTGGTT
ACTCATAGCAACGGTATTGTATCTTTCATACCAATGGAAAGACCTCgaaa
ttctaaatttttataattgattgaaatttttatgacgtcCTGCCTCGTTA
ATAAGCCCTTTGAAGGTaaaaaaaGCTaagaaatgtttcaaattttgacc
ggattatttttaattttctacaaCCATCGATGAGTAACCAATGGACTTAA
AGTATTTGCCTTTCTCGGCCAaaagtagcctgggaatccaagggTTAAAC
TTTTCCCACAGTCTAGCTTATATCatatttttgcttgttttatttAACTT
TTAACGCTAGGGGTAGTACCAGCAGTCTGATTGGCCAGATTTTGTGCGTA
CagtaaaagtgaaaaccccccTTTTAGATATGCAAACTTTGTATGAGAAC
CCTTCATTGaaaaaaaGCTACGAATGCCATTTTGGAATATGCCTAAAATT
GTATATAAACAGTCAAAACTAACTGTTGATAGAAATATGAATGATGTGGG
AATGATggtaaaattcatcaaaaattttgttagTTTGAAATGTATTCAAC
TATAGGTTGACAAGCCTCACATTTGAAACTGTTCCTCTAAACAGTGatcg
aatttaaaattttatgttttgatttatatttttcagCAAGCGTTGGCACG
GATCGCTGAGTTGGAGGtaaatatttcatcaaatatttGTACCTTTATCT
TTAccggggtttcagggggtacctgatTCCACAATTCctccaattttttc
tccaatttccgtgaaccaaaattccgtcaccgaaaattcctttgagcTTC
AATTTTTTCGTCGAAAATTCCacaaatttggaatatcttttaccaattcc
gaaattccgcaattttttttgctaaattccgtttttccgcactaaaattg
tctaattttccgtctccgtcagagaacccaatttccgtaattccgtctta
attttcgccaaattccgccactccgtccgaaaaaaagggccgattccgct
cctccgccaaacgTGAACCCCCCTTTACCTTTTTATTAGTATGTATTGCA
CAATAACAGGTCTCTGATGCCCTTAGATGTTCTGGACCGCACGCGCGCTA
CACTGTTCGACGCAGCGAGTCTTATTGGATAGTTTATTTAGCCTAAGCCT
GATAAGTATTAAAATCTTTTGGCTCCATTTAAACTTTACATATATATTAT
AATGCGCTTAAATCAGAGCGGCTGTATGGGTCAGGAATACTGTTTTCCAG
TCAAATTTTTGGCTGAATCCCAGCataccaaaaattgaaaaaataacacT
GTCATACTGGTTTGCAGCGGTTGCAAAAATAAGGTTAATCGCCATCACCG
TCTGAtttcaaaataccgttttccagACATTTTCATCAAATCCCTTAATC
CTGTACAAAATAAACACAAGTTGGCAAGGGTAGAACCCCCAGGCCTTGAA
GCAAACATGTGAAACCTCTAGGCTGCATATCACGTTCATCAAATGCAAAA
TCTTGTTGAAAATTCTCTTCAATTATACCTTATACCTTTATTCTCAACTA
AGAGTTctcatcttttatttttatacagCACAATCCACCTCAGCCCCAAC
CACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGTGAGT
AATATTGTTCATATTCATCAAAAAAGTAACATATGTGATACACAATCAAA
CAGTTTCCTCTCCAGACTtgagttgaaaatttcaaacgtTAAGCTTTTGA
CATTTATTTATCAATATAAAGttcatacccagcacctatttttcaGTCCA
CTCTGCTTGAATaagagttgaaaatttcaaacgtCAAGCTTTTGACATTT
ATTTATCAATATAAAGttcatacccagcacctatttttcaGTCCACTCTG
CTTGAATAAGAAACAAAGTCTCTTCTTATAATTTCATTTACACTATTTCT
ATTGCTGGATGTCGCTGCTAAATTGGCTATTCGTTTCatagattttattt
caaaaccaaaCTGTTATACTGTACTTGCAGAAAAATCTTGCACATTGAAT
ATTGAATATTGTTTGGATAGGATTCTCCTCTATCATAGGAACGTTTTGAA
AGATAAAGTAATTTTACAAACATAACACGTTGAAACGTTGTTAATCGAAT
AGTTGATGATTCCTAACATTAAATTTCTCATTATATTTTTAGGGAGAATA
TATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGGTACT
TGTACCAGGGTAAGGAATTCACCTTTTCTCTCGCAGCGCTTTGCGGCTTC
ACGAAAGGCATTTTAAATTCGGtcatttcaaactttttcaaattctccCA
TTTTTCAGTGCGAATTGAAGATACAAAGATTGAAATAGGCAGCAGTGCCA
AAGTTAAGCTCAACTGTTTGAAATTGTAAGGTCGTTTCCCCGAATTCAAT
ATTCATGTAATCATGTAGACTAGAAAGCGTTTGCGTTTCTTAAGATATAG
AAACGCGGGAAtagtgtttgaaaatttttcttataatcgATATTTGATAC
CTtaattgcaaaatattatggCATATAGGTATTTTCAATTGCTGTAAAGC
TTACGTCGTTATATTTGTATTTGGATTGTTTTATATTCAACTTTATTGAC
AGGttggatcaattttcaaaccCTGGTCCATATGGATGCCGTTCCGGCAC
AGGTCCAAGTCTTGATACCTGGAGGCAGTAAGTtcaattgtaaattttta
atggtGTGAAACATCTATCTAGAAACAAACTATCCCAATAGTAGATTTTT
AACTTACAGACTCTATATCTTTATGCAAAACAAACGGTATCAATATTATG
GGAATCAAGATTTTGCGTAGTAATCGCTTTTGAATTTCCTTTAGCGAGTA
AGCAAAGCCATAAGCTGCCAGTTTGAAACACATTGTGAATAGTAAAAAAG
AGGTTGTTATTAAAATCCTATTGAGTGCCACTTATTATAGCAATTGTTCA
ATTTAGCGCTCTACTAGAAAATAGTGAAACAAAATCATCTTAGACCAAAA
ATGGGAAAACGCAACTTCTTTTTCACCAGAACAATGCATTACACGTCCAT
GCTCTACATTAGCTTTGAGAAACTAAACTTTATCTTAAGATcaacaacag
caacagcagcaagaagaaccacaacaacagcaccagcagcagcaacaaca
accacaacagcagcagcagcaacaacaacagcaacaacagcaacaacaac
agcaacaacaacagcaacaacaacaacaacaacaacaacaaaatccaGTA
GCTGTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGCC
ACCCCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCCG
CTGTGGAAGAAGCAGAGTAA Coding sequence (CDS) from alignment at sc0000433_pilon:86681..90900+ >XLOC_008469 ID=XLOC_008469|Name=XLOC_008469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000433_pilon:86681..90900+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCGAAATAACCTCGAGCTAGCGCTGATGGACCGAAATAACCTCGA
GCTAGCGCTGGAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGG
ATCAGTGCCACATCAATCATCATCTCTACCAGGAAAACTTGCAGCTTAGA
GAGGAGCTCCAGGATTGGCAGGATCAGTGCCACATCAATCATCATCTCTA
CCAGCAAGCGTTGGCACGGATCGCTGAGTTGGAGCAAGCGTTGGCACGGA
TCGCTGAGTTGGAGCACAATCCACCTCAGCCCCAACCACCCATCCAGCAG
CCCCAACCGCCCGCACAACAAATGATTGGTCACAATCCACCTCAGCCCCA
ACCACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGGAG
AATATATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGG
TACTTGTACCAGGGGAGAATATATACGTCTAATAGTACCCTGCCGGAACG
GTGCTCAGCCTCACCGGTACTTGTACCAGGGttggatcaattttcaaacc
CTGGTCCATATGGATGCCGTTCCGGCACAGGTCCAAGTCTTGATACCTGG
AGGCAGttggatcaattttcaaaccCTGGTCCATATGGATGCCGTTCCGG
CACAGGTCCAAGTCTTGATACCTGGAGGCAATcaacaacagcaacagcag
caagaagaaccacaacaacagcaccagcagcagcaacaacaaccacaaca
gcagcagcagcaacaacaacagcaacaacagcaacaacaacagcaacaac
aacagcaacaacaacaacaacaacaacaacaaaatccaGTAGCTGTGCCT
CCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGCCACCCCCGCC
AGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCCGCTGTGGAAG
AAGCAGAGTAAATcaacaacagcaacagcagcaagaagaaccacaacaac
agcaccagcagcagcaacaacaaccacaacagcagcagcagcaacaacaa
cagcaacaacagcaacaacaacagcaacaacaacagcaacaacaacaaca
acaacaacaacaaaatccaGTAGCTGTGCCTCCAGTTGTGGCGCCACTGC
CCGTTGCCAATATTGACCAGCCACCCCCGCCAGCTGTTGACCCTGCCTTC
TTGGTCCAGCCACCACTACCCGCTGTGGAAGAAGCAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000433_pilon | genome | sc0000433_pilon:86681..90900 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-621:3942 |
| Aaloc | 268-339:3455 |
| Aaloc | 199-264:2993 |
| Aaloc | 133-198:2379 |
| Aaloc | 103-132:1437 |
| Aaloc | 31-102:451 |
| Aaloc | 1-30:1 |
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