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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:1396589..1402473- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008411 ID=XLOC_008411|Name=XLOC_008411|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5885bp|location=Sequence derived from alignment at sc0000018_pilon:1396589..1402473- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAACACAAGCACACTGGTACGGTGTAACGTTTGGTTCCGCACGTGG
TTTATCATTCTTCGCCAACTCTGCCGCCTTTGCATTGGGCGGTTATTTGG
TTCAAAATGATGAATTGGGATTTCAAGATGTTTTCAAGTAAGTAATCATA
TTCAGGTCAAAATCTTAAGCAAGACTTTATGAATTGGGTTATTCTGGAAA
TTTCTACCCTCTTTGTTTAGGAGCTTTTTTTTTTGCAAAAAGTGACCCCC
TAAATTTTTTTTCTATTTTTTTTGAACAACGTGGATTTTTGACCCTGTTT
TAATGACCACCCTGGATTTTCAACCTTATTTTACCGAAACCTGGATTATT
ACACTCCAAAAACTAGACCCCCAGATTTTGTTTATTTCCAAACCACCCTG
GACGAACACACCTTTTCAACATGGGGGGTAAAGAATATTTCTGAAATAGC
CCCCTTCTAACAGCTTCTGATCAATCAAATTTACTTCGCTTCCCGATTGG
CTTCGGTTGGATTCAATAGCTAGCTAGATTTGGATTTGATTGATATTGAT
GGTTTACCAATTGAAATATCTAGGAGTTTGATTCGCAAGTTAATCGCAGA
TTAACCGTATAGGTCCAGTCCCTTAGATGAAGGTTTCATTGGATGAACTC
ATTCAATTCCATCCAGTCAGTTGATTGACTTTGATTACTTCGATTGAATT
AATTGTAAATCATAATTCGTATGGATTATTTTGTTCGTTTCCATTGGAGC
CTGGCATGAACACTAACACGTAACATTAAATGTGGACATTAACATAACCT
GTCAAATTAAAAAAGATCGAAAAGTCTAACCTTATGTTTATTGTTGATTG
TAGAATCATTATCGCAGCCACATTTGGATCCATGATCGCTGGTCAAGCGT
TATCCTTTACACCAGATTACCTTTCAGCAAAAGTGGCTGCTGGTCGTTTG
TTCAAGCTCTTCGATACTGAATCCAAAATCGATGTCAATCAACCTGGTGG
AAAAATCAAGGTTCAAAAATTTTACACGCTTTTTCTATAAGAATGGTGTT
TCCCCATTTCATTTTGGAGAAAACCTTCCTAAAATATTCTTATACGGTAT
TCTTAGGTTAGGAACTAGGCTTCTGCTCATCCTCTAGCAAAAACAGTTTC
TTATAGAATATAGGAAGTATATCTATAAAGGTCTGCAGTTCAGACTAGTT
AGGAACGAGATTCAATGAAATTTAACATGTAATACACACCTAAAGCATAA
AATGGAATTTTTGTGACAGTATTGAAATAGGGGTAATAATTAACAATTTA
CAGTTAAAATGCTCTAAAAATTGCATTCGCAGATTCAGTTGCCGAATTCC
ATGATGGTGATATTCTTAGCATTATTCTTAATTTTTAAGAATAACATCAT
GGATATTCTTATAAAGTATATTCTTATATATAAAAAAGCGTGTACCTATC
CAACTGACTGATTATGATTTCTAAGAAATTAGTTTTCTTTTACCACAGGG
TTTAGGGAATCCTTTTTTAGGGTCCTTACGGAATATATTTCGCTATTTTC
AAGGTTTTGATGAATTTTTTAGATATGATTTTTAAGGCGTTTCGTTGTTA
AAGGTTCTTCAATACTCAGCACATAGCGCAAGATAAAGTTTGCCTCAAAA
TAACGAGGATAAAAGAAAAAACAACTGCTGTAAATTTTGTGACGATTTCC
AAAAATTAAATTGCTTTAGGAATGCTTGGATGGAGATGTGGACTTCCTGG
ATGTTCAATTCAACTACCCAACAAGACCAGATGTTCCAGTGTTGCAGGGA
TTGTCATTGCAAATAAGAACTGGACAGAAAGTGGCGTTGGTGGGAGCCAG
CGGTTGCGGCAAATCAACAGCGGTCGGATTGCTAGAGAGGTTTTACAATC
CAAAGAAAGGCGATATTGTAAGTATGGTTGTAATCTCGTGCCCAGTCTCA
AGCTCTTTCTATATATGATGGTCGATTGACCCGGCTTGGATTGATTTGGA
ACAGGGGCTCATTGACTACCAAATATTACAAACTTGCTCAACGCGAAAAC
AATGAAATTTTGAACAAGGGAATTTTGTATTTCACAGATATTAAGCTGAG
TACTCACTAGATCACACCGAGGGTGTTTGTCAGGCTATTCTCTAACACTA
GAAACGCATGGTTGCGTTTTGCATAAGTTGAAGCTTCGAAATGAAGTCTA
AGCGTGGGTGGGTGGTGATGAACGACTAGACTTCAGACATCTTAGAGAAC
TTAAGGGAATTTCTCTACACCCCTGTGTCAGACCCTCTGGGACTCCCATC
CCAACCAATTTTTGTCCCCGGTGGGAAATTTACCCGAAAATTTCAGCCCC
ACTACAAAGTCTACTTTGATTTCTTCACTCCCATTTGAAATTCAAGGGAA
AAACTCAAAACCATCCTCACTGGATTTCTGGACTTTTCAACAACAATTTT
GAAATTCTATCCTCATCTAGATTTCGATGAAATCCCCACTGTGGGAAAAA
ATTTATTCGGGTTGTGAGACAGGAGTATGTTACTTTGCAAACGAACATTA
CCCCGTAACAGTTATCGTATTATCAAATAACACCTTATTTACTGTATAAC
ACATATTATAAGCAATTCTAATCCCTTCTTGGGTTGGTCTAAAAATCAGG
GTTGTGGGTATAGGTATTTGGGCAAAAAAGGGTTACCCCACAACCTAGCC
CAACTGGGATACCCTGCTTTTTAGACCAACCTTCTCTACTTTTTTCTTTG
TAGACGATAGATGGCATGGACATTTCTGATTACAATTTAAAGTGGTTACG
TTCACAAATCAGTATCGTCTCTCAAGAACCCGTCCTCTTTGCCAAAAGCA
TCAAAGATAACATCACGTACGGGTTGACAATGGATGATGGAAAGCCAATC
CCGCAAAAATTAATCGAAGAGAGCGCCAGAAACGCAAATATTCATGATTT
CATCATGACTTTACCGTTGGTAAATGGAGTTTCTATATCTTAGAACCTTT
AACTCGAATTATTAAAACTCGAAAAAATTCTCCGGTCCCAACTTGAACAA
AATACACAACCCTTAACAACGGAGTAAAAAAGTTACCAGACTTAGTAGTG
CTATTAGGTTCAAATTTAGTGAGGCTTTTCGAAAACTAACAAAAAGAACA
CCTGGGTGGTGTGGAGATCCAGTAGCGTTTTCCCTTTTCCCGAAGAAGAG
TTTCTATTCTTGATTCAAATACCCCAAATGAAGCAATATTTTCAAGATAT
ATATTCTGGATTTGTTAAAACTTGTTGCGTGCTTAGGCCCCGACAAATTC
AAAATCTTTTCAACCAATTTTTCGATCAATTCCTCTGCACACTGGGCTCC
AACCCAGGGACATGGAGTAGGGTTTTGTATTGTTTTTTTAAGGAATCATA
ACTGACAAAAATCCCTATGTTTTTTATTAGCAGTTCTTTCAAAATCTGGG
CGGTGCCGTTATATAGGTTACTGGGTGCATTTACGCACCCCGTGAATATT
TGAGTTACGCCGTTGTATAGGTGCTTGGTGTGTTTACGCTCCCCGTGCAT
GTTCGAGTTACAAACACTCCCTTGGTTTGAAAAGAATTTCGAACATTTCA
ATGAGAAAGGTTTTCAAGAGCACTTTCAAAATTTCGATTGGCATATAGTT
AGAACAATCTGACAAGAATCTGACAGTCTATTTGAAGTGACTCTTTCCAA
TAATTACGTGAAGACCAGTTTTTTGTCAGATTCCTTAAATTTCATTTATA
ATTGTTGACCTCGTAGGTCGTTAAAAATTTTCTCTAATGAAAATAATGAG
AAGTTTGTAAAGATCGCAAACCCAGAAACTTAAAAATGTTGGTCCATTTT
TTATACTGGGAAGATAAGCCAGTTCCTGACCATAACTATATGTTCTTATC
GCCACTATAACACGCACAACAAAACATGAGCAAAACACTGCCAAGAATCA
TTTGGCACGATCCCGGCGGGGCGGGGGCACTGACCTTGACTGCCGACGGG
TACGTGCCGCTAAAGTTTGCAAAATGGACCCTGTCAGATATGAAAATTTG
GTAAATTTGGAACCCTTCAGAACGAAAAATCGAAAATTTCTCCCGTTTTC
ACCCTGAAAATTGTCAAAAATTACCAAAAGTCGACCCTACCAGAACACAT
CTTGAATATTAGTAAATTTGGGACCTTGTCAGATATCTTCAGAGCCTTTA
AAAGGGATCCCGACCAGCGGCACGTCCCCATACCCAATTTTGCCTAAGTC
CACCCTAGACTCAATTCTATATATTTGATCGCTTACTGTATTTAATGCAT
AACCTAACAACTTGATATTTTTCTAGGGTTACGAGACACTTGTCGGTGAG
AAAGGTACCTTGATATCAGGAGGACAAAAGCAACGTATTGCTATTGCAAG
AGCACTTATTCGTGACCCAAGGATTTTACTGTTAGATGAAGCTACGTCGG
CGCTAGATTCTGAAAGTGAAAAGGTAAGGGCTATAGTATTTCCATTCCCG
GGCTAAGATATCACTCACTTTCCGGAATTTTTCCACTGCTTTTACCAAGA
TAACCGACTAAAAAATAGAAAGGACTCGCTTCCTAAGATACAGAAAAAAC
CTTGTCAAATCAGTCAATACGTCACTTGCAGCCAAAGCTGTAGGGTCCGT
GAAAGACGGAATCCTGGTCTTATGAGAGTGGTAGTGAAAACTTAATCCTG
AAAGTGGAATCTCATGCAGGCTTAGCAAAACGCGCTATATGACTGCGAGA
AATTTTGTAAATTATTATTTCCGGAGGAGCGCACTAGGATATCAAGCGGA
AAGCATGTGATGTTAAAAGAATTAACTTTTAAAATCAAATCCTTATCTTT
ACAGCAAAAGATCAATGATTTCATGCCATGCATTTCCCCAGAATTTCAGC
ATTCACAGAGTATACAAGCATAGAAAGCAAGAAAAGCATTGATGGGGGCA
GGGGAAGGGAAAGGCAGAAGAGAGTAGCGAGGAAAAAAAGAGAGTAGAGA
CTACCTTAAGTGGATAAATTTTGGCGGGGATTAAATTTGGTGAATTTGGC
GAATTTTGCCAAAATTCACCAAATTAAATCCTCGCCAAAATTTCCAAATT
AGGCAATTCGCCAAATTAAATCCCCGCCAAATTTAACAAAAAGAGAACTA
TGTGAAAAATCACAACTTTTTAGTATATTTTTGAGTAATTTTCACCCATT
TCAGTGTGACAAAATTTCCAATTCGCCAAATTAAGTCCCCGCCAAATTTT
ACGAAATTGATCTATCGCCAAATTAAATCCCCGCCAAAAATCGTATTTTG
GCAAATCGCCAAATTAAATCCACGCCAAAATTTATCCACTTAAGGTATGT
TACCAGACTAAGTAGCGTGTTAATTTCTAAAATCCCACTTCACTTTATTA
GAAAAAAGGACTTAATGCCGGTCTCCCCTTTCGCGCAAAATGGTGACAGC
TTTTTTCTCAACTGTTTTCGCCTATAGAAACGTCATTAAAAAAGTTTCGA
GTGAAAATATAAAAAGTTGAAAGAAGTTTAACTTTTTAAACCGTTACGTC
AGATTTGCCCAATGGAATTGCTTCATTTTTCAACCGACCAATGACTTTAC
AAAAACGTTAAAAGGTTTTCGCTCATTTCGAGCGGAGACCGGCCTTTAAT
CCATGTTTCCCTGATATATTTATTTACTCTCACTTTTTTTCAGGTGGTGC
AAGACGCCCTCGACCGAGCCATGGAAGGGCGTACATCAATCATTATAGCT
CATCGCTTATCAACAATCCAAAATGCTGATATCATTGCAGTTATACAAGG
TGGTCGTGTTATTGAATGGGGGACGCATTCAGAACTATTAACAATGAGGG
GAGCATATTATGTTTTAAACTCAGCTCAGATGTAA Coding sequence (CDS) from alignment at sc0000018_pilon:1396589..1402473- >XLOC_008411 ID=XLOC_008411|Name=XLOC_008411|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0000018_pilon:1396589..1402473- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAACACAAGCACACTGGTACGGTGTAACGTTTGGTTCCGCACGTGG
TTTATCATTCTTCGCCAACTCTGCCGCCTTTGCATTGGGCGGTTATTTGG
TTCAAAATGATGAATTGGGATTTCAAGATGTTTTCAATCAAAAACACAAG
CACACTGGTACGGTGTAACGTTTGGTTCCGCACGTGGTTTATCATTCTTC
GCCAACTCTGCCGCCTTTGCATTGGGCGGTTATTTGGTTCAAAATGATGA
ATTGGGATTTCAAGATGTTTTCAAAATCATTATCGCAGCCACATTTGGAT
CCATGATCGCTGGTCAAGCGTTATCCTTTACACCAGATTACCTTTCAGCA
AAAGTGGCTGCTGGTCGTTTGTTCAAGCTCTTCGATACTGAATCCAAAAT
CGATGTCAATCAACCTGGTGGAAAAATCAAGAATCATTATCGCAGCCACA
TTTGGATCCATGATCGCTGGTCAAGCGTTATCCTTTACACCAGATTACCT
TTCAGCAAAAGTGGCTGCTGGTCGTTTGTTCAAGCTCTTCGATACTGAAT
CCAAAATCGATGTCAATCAACCTGGTGGAAAAATCAAGGAATGCTTGGAT
GGAGATGTGGACTTCCTGGATGTTCAATTCAACTACCCAACAAGACCAGA
TGTTCCAGTGTTGCAGGGATTGTCATTGCAAATAAGAACTGGACAGAAAG
TGGCGTTGGTGGGAGCCAGCGGTTGCGGCAAATCAACAGCGGTCGGATTG
CTAGAGAGGTTTTACAATCCAAAGAAAGGCGATATTGAATGCTTGGATGG
AGATGTGGACTTCCTGGATGTTCAATTCAACTACCCAACAAGACCAGATG
TTCCAGTGTTGCAGGGATTGTCATTGCAAATAAGAACTGGACAGAAAGTG
GCGTTGGTGGGAGCCAGCGGTTGCGGCAAATCAACAGCGGTCGGATTGCT
AGAGAGGTTTTACAATCCAAAGAAAGGCGATATTACGATAGATGGCATGG
ACATTTCTGATTACAATTTAAAGTGGTTACGTTCACAAATCAGTATCGTC
TCTCAAGAACCCGTCCTCTTTGCCAAAAGCATCAAAGATAACATCACGTA
CGGGTTGACAATGGATGATGGAAAGCCAATCCCGCAAAAATTAATCGAAG
AGAGCGCCAGAAACGCAAATATTCATGATTTCATCATGACTTTACCGTTG
ACGATAGATGGCATGGACATTTCTGATTACAATTTAAAGTGGTTACGTTC
ACAAATCAGTATCGTCTCTCAAGAACCCGTCCTCTTTGCCAAAAGCATCA
AAGATAACATCACGTACGGGTTGACAATGGATGATGGAAAGCCAATCCCG
CAAAAATTAATCGAAGAGAGCGCCAGAAACGCAAATATTCATGATTTCAT
CATGACTTTACCGTTGGGTTACGAGACACTTGTCGGTGAGAAAGGTACCT
TGATATCAGGAGGACAAAAGCAACGTATTGCTATTGCAAGAGCACTTATT
CGTGACCCAAGGATTTTACTGTTAGATGAAGCTACGTCGGCGCTAGATTC
TGAAAGTGAAAAGGGTTACGAGACACTTGTCGGTGAGAAAGGTACCTTGA
TATCAGGAGGACAAAAGCAACGTATTGCTATTGCAAGAGCACTTATTCGT
GACCCAAGGATTTTACTGTTAGATGAAGCTACGTCGGCGCTAGATTCTGA
AAGTGAAAAGGTGGTGCAAGACGCCCTCGACCGAGCCATGGAAGGGCGTA
CATCAATCATTATAGCTCATCGCTTATCAACAATCCAAAATGCTGATATC
ATTGCAGTTATACAAGGTGGTCGTGTTATTGAATGGGGGACGCATTCAGA
ACTATTAACAATGAGGGGAGCATATTATGTTTTAAACTCAGCTCAGATGT
AAGTGGTGCAAGACGCCCTCGACCGAGCCATGGAAGGGCGTACATCAATC
ATTATAGCTCATCGCTTATCAACAATCCAAAATGCTGATATCATTGCAGT
TATACAAGGTGGTCGTGTTATTGAATGGGGGACGCATTCAGAACTATTAA
CAATGAGGGGAGCATATTATGTTTTAAACTCAGCTCAGATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:1396589..1402473 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 856-1047:193 |
| Aaloc | 709-855:1560 |
| Aaloc | 493-708:3133 |
| Aaloc | 295-492:4167 |
| Aaloc | 139-294:5032 |
| Aaloc | 1-135:5886 |
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