XLOC_007702 (mRNA) -

Overview
NameXLOC_007702
Unique NameXLOC_007702
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000243_pilon:424567..426325-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007702 ID=XLOC_007702|Name=XLOC_007702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1759bp|location=Sequence derived from alignment at sc0000243_pilon:424567..426325- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCTATATCTTATTATGATATCGTGCTTACAAATCTACTTTGCTTT TTCTAAAACCGATCAATTCACCATAACAAGGCGTAATAAACAATTACGTG GATATAATTTAGTTTCGAAGTACAATGTAAACAAACCTATCGAATGTATT TTCGAATGTCAAAATTACCGAAAATGTCAATCAATCAATTATCATTCTGG TCAGCAAATTTGTCAATTGAATAAAATTGTCAGTCAGACATTAAGAGATG TCAGTTTAGCAGATGCTATTGGATGGCAATATTTTGAGAAGAAAGAGGTA TGATGTTTTAAGTTTGTTGCCAAAGAAAGATTGATTGAAGAGGGAGTGGC CAGACCCGCTTCAACACAACCGTATTCCCTCAAACTAGTGCCGCCTCGCT CTTTCAATTTTCAAGATTGTACAATCGTGCTCAAAACTTGTGTCCGATGA CCCTTTTTTCACCTCTCCCCCCAAAATCAATGCTGGAGTGAAATTTTTGC ACGTTCATAAGACTCACCATCAACATTGATATTGGCAAATTGAGGAAGGG CGGGTGGACAAACAGTTCTGTCCAGGATTGTAGATACGGCGCCCATTGGA GAGCGGCGGTTCACGAGGAGGGGGTTGCCATATAAAGGAAATGCATGTTA GGTTCGATATGTGATATACCAGTAGGTTAACTTATCTACATTCTTGAATT CTGGTGTTTGGGCCAATAAAAAAAGAAAGAACACAAAACTTCCAATTTAA TTCATCTTACCGTACCCTCAATCTTTATTGAACAGTTTGAAAGTCGTTCA GGAAATTTCCACTGGTTTCAGATTATTATAGTCTGGTAGGGTTAGCTCAT AAAAGGCCCCAGCGATCAATGATTTTGACAAATGATCCAAATTTTATGTT TTAGGATGTTGAAGTTTCAAAAGAACGTTATTTCTACATTACTGAAGGTA CTTTTACGCGCATAAACTATCTTTAATACTATAAGAAGACAGAATTTTAG TCAAATTTTTCATGCATTCATGTACTGAAAGGCTTTGATTTTAAAAAAGC ATCTGAAGGTTGAATAATAAAAAACATACGAGTAGAAACTTTAAGTCGAA TCGTGGAAATGGGCTCTTCCAGAAAATGTCCGTACATGGGTGGAGGATAT AGTGTCTGGGGGAGTGAAAAATCTACAAAATTTGCCCTTTCCGGGGGTTA AACTTTCTCTGTTTGGGGTTAATTTTGCTATCGATTTGAGGGTTATTTTG AATGTCCAGGGGGTCAACTGATGCTTGTCCAAGGGTCAGACCTGCTGTCC GGGGGTCAAAATTCACATTGTCCGGGGAGGGGGTAAATTTCTAGAAAATG CTATATCCTTCACCCCTCCCAATATTCAAATTTTTTCTGAAACAGCCCAA TGCCAGAAAAGGTCTGAACAAGCCATAAACTTTACAGTTCCTCTATATCG GCCATTCTTTTTTAAAAGCTTGATTTTCGAATGCTTTATTTGAAAGATTT CCTTGAAATTAACACAAACCTAACAATAAAATTTTCCACTGCAGAAACCA AACCAGAACGGAATAAATTGCTCAACATCATCCCATCAGCTTTTTCACAT TGGACATTATCAATAGACATTACACCACGTGCTTTCCCTCAAGATGGCCC TCGAAGCATTCTTCATATGATCTCAAGAAATGAATCTTCGGACGACGTCA TTACAATACTATCCATCCTCCAAGATGGAGGTACGAGTTGTACAGGGGGG TCTCCATAA

Coding sequence (CDS) from alignment at sc0000243_pilon:424567..426325-

>XLOC_007702 ID=XLOC_007702|Name=XLOC_007702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1110bp|location=Sequence derived from alignment at sc0000243_pilon:424567..426325- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCTATATCTTATTATGATATCGTGCTTACAAATCTACTTTGCTTT
TTCTAAAACCGATCAATTCACCATAACAAGGCGTAATAAACAATTACGTG
GATATAATTTAGTTTCGAAGTACAATGTAAACAAACCTATCGAATGTATT
TTCGAATGTCAAAATTACCGAAAATGTCAATCAATCAATTATCATTCTGG
TCAGCAAATTTGTCAATTGAATAAAATTGTCAGTCAGACATTAAGAGATG
TCAGTTTAGCAGATGCTATTGGATGGCAATATTTTGAGAAGAAAGAGATG
GCGCTATATCTTATTATGATATCGTGCTTACAAATCTACTTTGCTTTTTC
TAAAACCGATCAATTCACCATAACAAGGCGTAATAAACAATTACGTGGAT
ATAATTTAGTTTCGAAGTACAATGTAAACAAACCTATCGAATGTATTTTC
GAATGTCAAAATTACCGAAAATGTCAATCAATCAATTATCATTCTGGTCA
GCAAATTTGTCAATTGAATAAAATTGTCAGTCAGACATTAAGAGATGTCA
GTTTAGCAGATGCTATTGGATGGCAATATTTTGAGAAGAAAGAGGATGTT
GAAGTTTCAAAAGAACGTTATTTCTACATTACTGAAGGATGTTGAAGTTT
CAAAAGAACGTTATTTCTACATTACTGAAGAAACCAAACCAGAACGGAAT
AAATTGCTCAACATCATCCCATCAGCTTTTTCACATTGGACATTATCAAT
AGACATTACACCACGTGCTTTCCCTCAAGATGGCCCTCGAAGCATTCTTC
ATATGATCTCAAGAAATGAATCTTCGGACGACGTCATTACAATACTATCC
ATCCTCCAAGATGGAGGTACGAGTTGTACAGGGGGGTCTCCATAAAAACC
AAACCAGAACGGAATAAATTGCTCAACATCATCCCATCAGCTTTTTCACA
TTGGACATTATCAATAGACATTACACCACGTGCTTTCCCTCAAGATGGCC
CTCGAAGCATTCTTCATATGATCTCAAGAAATGAATCTTCGGACGACGTC
ATTACAATACTATCCATCCTCCAAGATGGAGGTACGAGTTGTACAGGGGG
GTCTCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_007702XLOC_007702-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000243_pilongenomesc0000243_pilon:424567..426325 -
Properties
Property NameValue
Aaloc343-555:214
Aaloc298-339:856
Aaloc1-297:1760