|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000243_pilon:155732..159276+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007688 ID=XLOC_007688|Name=XLOC_007688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3545bp|location=Sequence derived from alignment at sc0000243_pilon:155732..159276+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcagcTTCTGGTGACCATGACAACAATGACACCAATGGCTACTCTTC
ATCGTCAAGCAACGAAGACGAAAGCACAGGATATCCTTTCGACTTTTTGG
AGACCGATTTCCAGTGTATAGTTTGTACGATGGTGATAAGAGGGTTCACA
GAACTGCCATGTGGACATGCAGGATGCAAATTCTGCAttgaaaaatggga
aaaacaGAAAGTGTAAGCCAATacattttaacaaatttaataaCATACAC
TTACAAACATTTACGAGGTAAAACAATTACGAACCTtcgcaaattttaga
aaaaatatagtATATTTCCCCAATAAACTTTTGGGCATCGttaatcaaaa
actttttaaacttcTTTTTAAAGTGGCCAATATTTCTTCAGTCTAATAAA
AATAGTTGTTTTATAAccactttgttttattttacttttcagAGTCTGCT
GTGAATGTCAGGAATCTTACGACAAAACCAAGGTAAATTTCAGTCTTCTT
CAACAGATAGAAAAAGCTATTTTGAGCCTAAGTGCGTTTAACAGTTAGGT
GTACTTAGACTCTATTTCTTTAATCACTAAAAAGtgatttgaacaaaaaa
aaaggaataaactGATATAGAGCTAGCCGTAATTTTCATCGAACACATAT
AGTtgaatttgctttcaaaaggaatggtatTAGCCCTATAGTGATTTTCA
TTAAAAGTGActtctcatctgagacaaaattctgtcttcaaatgcTAATA
AATATGCCAAGGGAGTTATTTACAATTATAATTTCAGAATAAAGACCATT
TAGTTTTGGCGTCTACTGAAATTTAGGCAAAACCTGAGAACAAATACAGA
ACAATCTGAGCCAAAGATTCAGAAgttactgagaagtacagatTTCCTTT
TCAATTAATAAGCCAAGTACACTTAAGTCTTCAAGCCTCATAAAATTCAG
AACAGTCCAGCCACAGAGCCATAAGTTACTGACTTTTCTATAAAAAGTGT
GATACTGCtctcatatgttattttacacGATTAGTGACATACAAtgttga
atgattttttaagcTACGCGGAGCACTTAATAACTATTTCTGGtataaaa
aagggaatttccctagaTTCAAGATAAAAATGCTACCGGGACTCCATTTA
AGCGGAattaaaatgctgaaaaacaagcgcaaaattatgagatgtttgcc
taACTTTCTTATACGCGAAGCTATGGATGCCATTCTCCGTCActttaggc
tccctgcggtggcaaaaaatGCCCTCCccttttgaaatattaaaacaatT
GAATAGTTTTTACACGCGATGTCTTTGTCAAATAatgtcaaaattaattt
ttagaaGCAGGAAAGTCGGTACAATGACCGAAAAATCAAGTACGAAAGAC
AAGCTCGCTGCAAGCAACACGAACAAGGCTGCACCTGGCAAGGCTCCATT
GCCGATTACAAAGATCAGGTATGGACTTCATATTTCCTAATTGGTTGcga
tttaaagaaaattaattttactaTCTACATAAATTTCAGCAAAACTTAAA
GTgagtcaaaacaaaacagaacaCCTGTGATTCTACAGTATGtctacaaa
ttcaaaaattttgagatttgttttgcatgtttaaaaatgtgttttttaac
ctttctcaaaaaaataacatgCTCATCAACATGTCAAGACTTGTTTTCAT
GTAACTTATAACATGTTCAAAAATAGGACATAAGTTTTGCGCGGAAAACT
GTGGGTCTTCGACATGGTCATTTGTACGTTaaaaaaaCGTATCAGGATGT
ATATTTTAGAAATGCttgtgaaattgattttttgcctttttttgagaaat
tatggAAAAAGTCTTTTTTGACGACATAAAACTTAGAATTTTAATATCTC
CATAAGAACTAATCAAAAGTTTATGAGATTTTGCCCAGAGAGGTGTTGGT
AATCTatcgtgaagttgggtaacttgcattagCGAAGggttgcatagccc
tcaaatgaatgacctggctggtcattaaaatgcaaagttaaatcaagaga
aaaatgGTAGAAAAGAGTAGCGAGCAGAGCTGCAtagttaatttgttttg
aaattttgctgcttttattggtcatttatttgatggctatgcaagtttcc
ctccactgatgcaagttacccgatttcacagtataacttttgaaaaagaa
tgttgttatttttttaacttttccgATGATTTCAGCAGATATTTGCAAAA
ACTTATTTTGTCTACAAAAATGATGATatcatcaattttcaatttatttt
tcatgaattgcTTCCTCTTAATAATATGCATCTAAGGTGTAAATGTGATC
CTATTTTGATCATTAGTTTTTgacatattcaaattttaattttgatgacg
tctCATCGTTTAAGTTTATTTAGAGTAGAATAACAATTATAATAAAAGAG
TTAGAcatatatattttatacatAGCATCGTAAACGCTGTGGTTTCAAAA
AAGTCAGATGTCGTCTGTGTAATCAAAAAGTCGTACGACATGAAACAGAG
GAACACAAATTGACGTGTACACATCGTTTGGTTAATTGCACAAAATGTGG
TGCCCAGTATAGCTTCATCAATAAAAAGGTGctactttcatttttcaatt
tggtTAATTAAGATAAAATACCCCTGTTTCAGTAACTTAGTGAATAGGAA
AAGCAAATTCATTTACGTTAGGATAAAAATCCTACATTGTTCCTATGTAA
ACCGTAAAGCAGTTAACTTctgttaaaatacttttttgttTCTCTCAATA
AATActcaaaagttatgattttaTTTGGATATGTGACTTGAAGTAATCCC
TGTTTGACAATGAATTCCCCTTGTCAGGTTTTTAGAACtaggaaaacaaa
ataattgaggTTGGTTTATTTAAGCTAGCATGCAATCAGAAATTGCATGC
AATACTGTTGCCCACCCTGGCCAACAGTATTGAAAGTgggcttttcaaaa
aaaaaaaccgtataccccctgttgaggaggtctatccctctgtggctgga
aatgctgtaaccccttggaattccaggcaatttcagcccctctggaattc
tgaattttagtaggatttaaaagctacccccatggaattccagttatttt
tgacagatttttgtatctccttATGGAATTCGGCCACATATCAAACACTA
CCCCCTTAGAACGGAAATGgagggtttttttctggaaaagcccatttcaa
AATTACGGAGGCTTGAGTATCATGCTCTTAATTAATTGGATTCGTCCAGT
CCATAAAACGAGTACCTTATGAGATTTCTTTACCatcttttcttgatttt
atttttccattttagaAACACGACGATGAACAATGCAAGCAGCATTTTGA
TTATTTGCAATTTGGTTGTCATAAAAAGGTGACGCTAATTGCCAAGGGGT
CGGAACAAGCAGATATTCAACAAGATGACCACGGCTTACCTCATGGTGGG
GTTATCCCTGAGAAATATCAAGAAATCACGCAATCATGGGTCCAG Coding sequence (CDS) from alignment at sc0000243_pilon:155732..159276+ >XLOC_007688 ID=XLOC_007688|Name=XLOC_007688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000243_pilon:155732..159276+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcagcTTCTGGTGACCATGACAACAATGACACCAATGGCTACTCTTC
ATCGTCAAGCAACGAAGACGAAAGCACAGGATATCCTTTCGACTTTTTGG
AGACCGATTTCCAGTGTATAGTTTGTACGATGGTGATAAGAGGGTTCACA
GAACTGCCATGTGGACATGCAGGATGCAAATTCTGCAttgaaaaatggga
aaaacaGAAAGTatggcagcTTCTGGTGACCATGACAACAATGACACCAA
TGGCTACTCTTCATCGTCAAGCAACGAAGACGAAAGCACAGGATATCCTT
TCGACTTTTTGGAGACCGATTTCCAGTGTATAGTTTGTACGATGGTGATA
AGAGGGTTCACAGAACTGCCATGTGGACATGCAGGATGCAAATTCTGCAt
tgaaaaatgggaaaaacaGAAAGTAGTCTGCTGTGAATGTCAGGAATCTT
ACGACAAAACCAAGAGTCTGCTGTGAATGTCAGGAATCTTACGACAAAAC
CAAGaaGCAGGAAAGTCGGTACAATGACCGAAAAATCAAGTACGAAAGAC
AAGCTCGCTGCAAGCAACACGAACAAGGCTGCACCTGGCAAGGCTCCATT
GCCGATTACAAAGATCAGaaGCAGGAAAGTCGGTACAATGACCGAAAAAT
CAAGTACGAAAGACAAGCTCGCTGCAAGCAACACGAACAAGGCTGCACCT
GGCAAGGCTCCATTGCCGATTACAAAGATCAGCATCGTAAACGCTGTGGT
TTCAAAAAAGTCAGATGTCGTCTGTGTAATCAAAAAGTCGTACGACATGA
AACAGAGGAACACAAATTGACGTGTACACATCGTTTGGTTAATTGCACAA
AATGTGGTGCCCAGTATAGCTTCATCAATAAAAAGCATCGTAAACGCTGT
GGTTTCAAAAAAGTCAGATGTCGTCTGTGTAATCAAAAAGTCGTACGACA
TGAAACAGAGGAACACAAATTGACGTGTACACATCGTTTGGTTAATTGCA
CAAAATGTGGTGCCCAGTATAGCTTCATCAATAAAAAGaAACACGACGAT
GAACAATGCAAGCAGCATTTTGATTATTTGCAATTTGGTTGTCATAAAAA
GGTGACGCTAATTGCCAAGGGGTCGGAACAAGCAGATATTCAACAAGATG
ACCACGGCTTACCTCATGGTGGGGTTATCCCTGAGAAATATCAAGAAATC
ACGCAATCATGGGTCCAGaAACACGACGATGAACAATGCAAGCAGCATTT
TGATTATTTGCAATTTGGTTGTCATAAAAAGGTGACGCTAATTGCCAAGG
GGTCGGAACAAGCAGATATTCAACAAGATGACCACGGCTTACCTCATGGT
GGGGTTATCCCTGAGAAATATCAAGAAATCACGCAATCATGGGTCCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243_pilon | genome | sc0000243_pilon:155732..159276 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-699:3366 |
| Aaloc | 367-519:2476 |
| Aaloc | 253-366:1355 |
| Aaloc | 214-252:444 |
| Aaloc | 1-210:1 |
|
