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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:92752..96657+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007577 ID=XLOC_007577|Name=XLOC_007577|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3906bp|location=Sequence derived from alignment at sc0000308_pilon:92752..96657+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGGTTGTTTGGATAATGCAAATTGTCCTGAAATCAACTGTCCTGA
CCTCtcagaaaaaagaaatcaacttGCTTCAATAGCAGCTGGAGCCTTGG
TAAGTATAtcatattttaaagaatttttaataaCAAATCATGAAATGCAT
TCaaaaaaaTGTCCCCTCAATGGTCCTGGGAGGGACTAGCAATTTTACTA
CCTCAAGTGTATATATTTTCGTGAAGTACTAAATTTTCTGGTGTagttaa
tttcgcgaaatttagtactGTTTTGTtagtaaatttttcaagaacacAAA
ATTAAGAAAGGAAATTAacacacaaattttttttaactaggtcgaaagtt
tttttacactGTGTTGACTATTTAGTCACCATTTGAATACagttttgtta
ctatttttgcCCCTATTTACATcgtttttcaagcaaaatcagtctctttt
tttttgaatcCTTTTCTTTTAATATATAATCATATAATTGTGAGTGAATC
acaaaatttaatacacgccAAAAATTCCAGAAAGTAGCAATCGCAAAATT
TTGTACTCATGAAATTCATTTCTCGAAAGTACCCGCAAAAATATATAGAA
GTCAACCCAAAGACAATTTCATTTGACAGACTTTCGTACCCCACACACGt
ttttttGGAATAAATTCTTAATATGTGCTTATGTCAGCTGAAGTGATTGA
TCTATCTGAAAACAAAGCCATAAGTATTTTATAAGTGTGTATTACTTGCa
gaatttcaatttgaaaaatgaatagcACGATCATCATCGCACAATCGCGA
TATGGGTATCTATACCTTTTCAAATAGATATCATTATTTGTTTGGTGAAC
AAATCACACAAAAAGAAGTGCTCAATACAAAAGATAgaactttctttaaa
attatattgttctaTGACATGGTGAATAGAACTTTACATTACTCAGGGTC
ATGTACTCAACAATCATCAGAtgtaaatgaaaatttataaaccttttcaa
atagaataaaaattaattttaaacaagcaagtaaaaaaaTGATATGGAAA
CCTTAAAAATCGTGATataaagcaattttttttccttctagttttTTATT
GGCTGGTGGTTTATTATTGATGCTGCAGCCAACACACCTCTTGATAAGAA
TGCTTATCACACATGCGGCGTCGTCTCTACTATAGCTCTCTTTATGTAAG
TGAGAACACTCCATGCTCTTCTTATACCCCTTAAATATATTGGTAACCTC
CTAATTCTGAAACCCTTCTTTAGAGGTAAAAAAGATGAAGGAATCTAGCA
CTAAACTAATTTTTTGTTCTTTGgctaataagaaaaataaataaattgct
CAACATATCAATAATACAATTAAAAGAAACTCTGAGATTTGGAACACATC
CAGCATGTGAGATAACGACAAAgtgcaaaattgtttttttttgttaaaag
ctATGTGATaatctgatttttctgaaaatttttgaacatcTCtttttttt
tAGGATAAATGCAGTTTCAAATGCTCAAGTGCGTGGTGATACGTTCGAAG
GAGGTTGTCTCGGACAAACAGgtactttttccttttttatgatCTCAATA
TGTTGACAAGCGTAGGTCAAGATCAggtacttttaaatttttatgatCTT
TGTATTATTTTTGACAAGCGTAGGTCAGGATTACTTCATTCTTCCAATCA
GGAACTTCTGGAAAAGTGTGActgtttgtaaaaaatgtataaacaaaaat
gttgaattcttgctcttttgatttttcttattgGAAATTCACGTAAAAAA
TGATGCAAGCCGGGTCATCAAGACATTAATTAGAGCTTTTTTATCTTTGA
GAGGTGACAAAGAAAATAATGTGATGTTTAGGCTATTGTGATATATAGTA
agtatttcatttgttttgaatttatcaATCAAGTGTTGGTTAGCTCGTTT
TTCACATTTTAGGAGCAAGGATATGGTTGCTTCTTGGCTTTCTTCTTGGT
TTCGGTGGATTGATTGGAGCCTGTTGGGTTTTATTTGGTGATTATGTAAC
TAAAGGTGAGTCAAACTTTAGTACATTGTTTATAAGGACAACAAAAAAGT
GTAATTGGGTGGTAGGGATAGGTAAGAGAGGTGTCATATGTCCTAATTAT
GACCTTAAATTAGCTACAGAACGCGTAGGCCttattggcaatattttttt
ggTGCTGACTTTCTTGACTTTGATTtgagcaaaaatatttgaaggtTTTG
CTATTTGCTCATTACCACGAAAGAAATCTACATCACAAAGATCCCAAAtt
atctgattatcccttttatAAGTACTGCCTGGTTGGGCAATCTTTGAAAC
tattgaaaaaattatgtttctaGAAATTATattcattaaaaatataattt
ttatttcggCCTTTGGCAGAAAAGAATTTCTGCTAGATGTAACATTATCA
TCGGTGTTTTTAAAGACTAAAGACGGTCATAATTTATAATGAATTATGag
attaaaagctttaaatggTGGTAATTATTCCATATGGATGAAGAAATTAG
TCTACAAAGAAAGTCATCAGATGataatttggaaagaaaaaagtatCATG
GCTGAAAAGAATTATACTGTCCATTCATCAACAGTAATAATTGCATACCT
TATCGGagaaatgtcgggggaaagtgacgaaaattttgagggggtgacga
aattttcccccgacgaatttttcccccgatattttatcacccgaccaaaa
cttttacccaattttttaaaccccaaccaaaatctaatttttttacacct
ttattaaccgaaattagttctttaaacgtcgaattacaagatcttttttc
gagctagtgaaggaaaccatttcatttggacaatttatttgggtgaaagt
gactaaattgtaaatttcgtcggggaaaagtgacgaatttgaaattttgg
tcgggggaaagtgacgaaaatgcctctaggtgacgaaatttttccccgac
gaaaaaaaaccccgactaaataaaactccgacatttttttccccgataag
gtacgtttttttataagaacatttttgaagccttaagatgttctcaagtt
tttgagttttaagcctaaaaatgctcttaacatgttcttttttcACCATT
CTCAACTTgcttttaacattttggccatggaagcctTACAATCTTATATA
TTAGTCTGTTCttgtataaaaaaacgtgtatacgtTTGTTCCCAAATATC
CTTtctaaaatttcatcattgatatttctaacattttcatatataaaata
ttcttaacaataTTCCTAGGTTAGGATCCAAACCCAACCTAAGTTTAACA
TGCATACCTTGAGCAGGAATATGGCGAAAGTCTTTGAGCAATAATGGCTT
TGGATAATAGACCATTTTACACTAAcgaatgctctaaaaatgtcCTTAGG
TTCAGTCTCCTGATTTCACGATGGTGattatattttggccaatttcaccA
TGAATATTTTAGAAGTATTTTACTTAAATCCATTAACAATAAAAGCTGCT
TTCAATTAGCTTTGGCATTCGCAGCAACAAAGAGTATCATGATTATCATT
TTTCTATTTAGATGTTCCGAGCACTTGGCCTGGGGTGgcagtttttttac
aaaattcctTCATTTTCTTCAGGTAAGGTTAAGGAGACTTCTGATTAAAT
TATTGAGGGctagtttttattttgaaaatttatctttGTATTTCTTACTA
AAGATTTCATCTAATATTTAGCGAAGATTCTGATACATTCTGTTTGCGAG
ATTTCTTTAACAATCTATGCTGTAATTTATCcgtgaaaaattttctgttt
cgtTTTCTTTCAGTGCGTTGGTTTTCAAATTTGGTCGGACTGAAGACGAC
TTCTAA Coding sequence (CDS) from alignment at sc0000308_pilon:92752..96657+ >XLOC_007577 ID=XLOC_007577|Name=XLOC_007577|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000308_pilon:92752..96657+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGGTTGTTTGGATAATGCAAATTGTCCTGAAATCAACTGTCCTGA
CCTCtcagaaaaaagaaatcaacttGCTTCAATAGCAGCTGGAGCCTTGA
TGTCTGGTTGTTTGGATAATGCAAATTGTCCTGAAATCAACTGTCCTGAC
CTCtcagaaaaaagaaatcaacttGCTTCAATAGCAGCTGGAGCCTTGtt
ttTTATTGGCTGGTGGTTTATTATTGATGCTGCAGCCAACACACCTCTTG
ATAAGAATGCTTATCACACATGCGGCGTCGTCTCTACTATAGCTCTCTTT
ATttttTTATTGGCTGGTGGTTTATTATTGATGCTGCAGCCAACACACCT
CTTGATAAGAATGCTTATCACACATGCGGCGTCGTCTCTACTATAGCTCT
CTTTATGATAAATGCAGTTTCAAATGCTCAAGTGCGTGGTGATACGTTCG
AAGGAGGTTGTCTCGGACAAACAGGATAAATGCAGTTTCAAATGCTCAAG
TGCGTGGTGATACGTTCGAAGGAGGTTGTCTCGGACAAACAGGAGCAAGG
ATATGGTTGCTTCTTGGCTTTCTTCTTGGTTTCGGTGGATTGATTGGAGC
CTGTTGGGTTTTATTTGGTGATTATGTAACTAAAGGAGCAAGGATATGGT
TGCTTCTTGGCTTTCTTCTTGGTTTCGGTGGATTGATTGGAGCCTGTTGG
GTTTTATTTGGTGATTATGTAACTAAAGATGTTCCGAGCACTTGGCCTGG
GGTGgcagtttttttacaaaattcctTCATTTTCTTCAGATGTTCCGAGC
ACTTGGCCTGGGGTGgcagtttttttacaaaattcctTCATTTTCTTCAG
TGCGTTGGTTTTCAAATTTGGTCGGACTGAAGACGACTTCTAATGCGTTG
GTTTTCAAATTTGGTCGGACTGAAGACGACTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:92752..96657 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 427-468:3865 |
| Aaloc | 367-423:3614 |
| Aaloc | 274-363:1965 |
| Aaloc | 205-270:1505 |
| Aaloc | 100-201:1092 |
| Aaloc | 1-99:1 |
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