|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:711245..713254+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007516 ID=XLOC_007516|Name=XLOC_007516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2010bp|location=Sequence derived from alignment at sc0000130_pilon:711245..713254+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACATCAGTATCATATAATAAAGCTCCTCCTCTGCTATCACAAAG
TAAGAACTATGAGGATTGGAAGAAATTAATTGGAATTTGGACGGAGCTTA
CAACATTAGACAAAAAGAAGCAAGGACCGTCCCTTGTACTCACTCTTGAC
GGGAAATCACAAGAAGCTGCATTGGAACTTTCGAGAGAGCAGATATCTTC
TGAAAATGGAGTTCAAAACATCATCAATAGGCTTGATAAGATCTATGCAA
AGGATAAGTTGACAGAAAAGTTTGATGCCATTGAGAAATTTGAGACTTAT
AGACGAACAAAAGAGAAGAAGATACGAGATTTTCTAACagaatttgacaa
aagatattaTAAGATAAAGAACTATATTAACTACCCAGATGATCTGCTAG
CATATCGGCTTCTAAAAGCTGCCAATCTCGACAATTCTCATGAAAGACTC
ATAAAAGCAACAATAACGGATTTAGTTTACGAAGATGTGAGACAAAAgct
aataaaagtttttgcagAAGAGTCTATCGAAGGAGATTTAGAAAGCAGTA
TGTCTTCTGTAAAAATCAAGTCAGAGCCTGCGTTTTATACAAATGAGGCC
CACCCAGACGATTACCAACCAACATCATCAGATGAAGAAGGTGTGTATTA
TGTTAAACGTAATTACAACCAAAGATTTTCCtcatcaaaattcaataaaa
aaggaaataattgGCGCCAGGAGAAACCTGCTGTTCGAACTAAGGCAGAT
TATTCGAGAAAACCTGGCAAAAATCCACTTGACAAGAATGGCCGTGTTTC
TAGATGTGTGATATGTGAAAGCGTATACCATTGGCAACAAGACTGCCCAG
AGAAACAAAATGATACGTACATGGTACATGAAATCGTCCTTCATAATGAA
AGCAACAAACCAGGTCAACTTAAACATCTAGTATCAGAAACTTGGAATTG
TGGCTTGCTCGATTGTGGTGCCAGTAAGACGGTTTGTGGAGATGTTTGGC
TTGAACAATATGTCAACTCTTTATCTGATGAAGAAAAGAGAGAGGTAAAG
CATCATCACAGTAAAAGCCTATATCGCTTCGGAGACGGAGAACAAGTCCA
GGCTTGTGGAAGAGTCTCAATCCCTGCTATTATCGGCAACACAAAGGTCA
AGATAAACACAGACGTCATACCAAAGGACTTACCCTTGTTACTATCAAAA
TCATTCATGAAAAGAGCTGACATGATCCTGGATTTTCAGAATGACAGTGC
AAATGCATTGGGGGAAACTGTTCACCTAGCAACAACTTCAAGTGGACATT
ATACCATTCCTCTGACCAAACCACGTCAAATAATTGCTTCAATAGACAAG
CCTTTTGAAtgcaattttgttttcatttcgaAAGAGGACAAAAACATGTC
CTCGATTGCTGAAAAACTTCACCGGCAGTTTGCTCACCCATCTCTCAACC
AAATCTTGTCTCTTATCAATAAAGCAGGGGCACCATGGAGTAACAGCAAG
GAGTTGATATCAGAAATCAAAAGAGTAGACAAGGAATGTACAACATGCCA
AATCTACAGAAGATCACCACCTCGTCCTGTTGTTGGATTACCCATGGcat
caaaatttcttgaaacAGTTGCCATGGACTTGAAATTCTACGATAAGAAA
ATAATTCTCCATCTTATCGATATGTGTACTCGCTTGTCAGCTGCAACGAC
TATAAAGGATAAAAATCCGACCACAGTCATTGAGGCAATACTAAAAACGT
GGATATCCGTCTATGGCTCATGTGAGAAGTTCCTCGTGGATAATGGAGGT
GAGTTTGCAAATGAGGAATTAATCAATCTAGCAGAACAGTTTGGAATCAC
GATAAAGACTACTGCGGCTGAATCTCCCTGGTCAAATGGCATTGTAGAAA
GACATAATCAAACACTTTCCAACATGCTTGATAAAGTACTAAACGATACA
AAGTGCAGCATTAACACTGCCCTTTATTGGTGTGTAAATGCAAAGAATTC
ACTGCATAAC Coding sequence (CDS) from alignment at sc0000130_pilon:711245..713254+ >XLOC_007516 ID=XLOC_007516|Name=XLOC_007516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3684bp|location=Sequence derived from alignment at sc0000130_pilon:711245..713254+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACATCAGTATCATATAATAAAGCTCCTCCTCTGCTATCACAAAG
TAAGAACTATGAGGATTGGAAGAAATTAATTGGAATTTGGACGGAGCTTA
CAACATTAGACAAAAAGAAGCAAGGACCGTCCCTTGTACTCACTCTTGAC
GGGAAATCACAAGAAGCTGCATTGGAACTTTCGAGAGAGCAGATATCTTC
TGAAAATGGAGTTCAAAACATCATCAATAGGCTTGATAAGATCTATGCAA
AGGATAAGTTGACAGAAAAGTTTGATGCCATTGAGAAATTTGAGACTTAT
AGACGAACAAAAATGGCAACATCAGTATCATATAATAAAGCTCCTCCTCT
GCTATCACAAAGTAAGAACTATGAGGATTGGAAGAAATTAATTGGAATTT
GGACGGAGCTTACAACATTAGACAAAAAGAAGCAAGGACCGTCCCTTGTA
CTCACTCTTGACGGGAAATCACAAGAAGCTGCATTGGAACTTTCGAGAGA
GCAGATATCTTCTGAAAATGGAGTTCAAAACATCATCAATAGGCTTGATA
AGATCTATGCAAAGGATAAGTTGACAGAAAAGTTTGATGCCATTGAGAAA
TTTGAGACTTATAGACGAACAAAAGAAGATGTGAGACAAAAgctaataaa
agtttttgcagAAGAGTCTATCGAAGGAGATTTAGAAAGCAGTATGTCTT
CTGTAAAAATCAAGTCAGAGCCTGCGTTTTATACAAATGAGGCCCACCCA
GACGATTACCAACCAACATCATCAGATGAAGAAGGTGTGTATTATGTTAA
ACGTAATTACAACCAAAGATTTTCCtcatcaaaattcaataaaaaaggaa
ataattgGCGCCAGGAGAAACCTGCTGTTCGAACTAAGGCAGATTATTCG
AGAAAACCTGGCAAAAATCCACTTGACAAGAATGGCCGTGTTTCTAGATG
TGTGATATGTGAAAGCGTATACCATTGGCAACAAGACTGCCCAGAGAAAC
AAAATGATACGTACATGGTACATGAAATCGTCCTTCATAATGAAAGCAAC
AAACCAGGTCAACTTAAACATCTAGTATCAGAAACTTGGAATTGTGGCTT
GCTCGATTGTGGTGCCAGTAAGACGGTTTGTGGAGATGTTTGGCTTGAAC
AATATGTCAACTCTTTATCTGATGAAGAAAAGAGAGAGGTAAAGCATCAT
CACAGTAAAAGCCTATATCGCTTCGGAGACGGAGAACAAGTCCAGGCTTG
TGGAAGAGTCTCAATCCCTGCTATTATCGGCAACACAAAGGTCAAGATAA
ACACAGACGTCATACCAAAGGACTTACCCTTGTTACTATCAAAATCATTC
ATGAAAAGAGCTGACATGATCCTGGATTTTCAGAATGACAGTGCAAATGC
ATTGGGGGAAACTGTTCACCTAGCAACAACTTCAAGTGGACATTATACCA
TTCCTCTGACCAAACCACGTCAAATAATTGCTTCAATAGACAAGCCTTTT
GAAtgcaattttgttttcatttcgaAAGAGGACAAAAACATGTCCTCGAT
TGCTGAAAAACTTCACCGGCAGTTTGCTCACCCATCTCTCAACCAAATCT
TGTCTCTTATCAATAAAGCAGGGGCACCATGGAGTAACAGCAAGGAGTTG
ATATCAGAAATCAAAAGAGTAGACAAGGAATGTACAACATGCCAAATCTA
CAGAAGATCACCACCTCGTCCTGTTGTTGGATTACCCATGGcatcaaaat
ttcttgaaacAGTTGCCATGGACTTGAAATTCTACGATAAGAAAATAATT
CTCCATCTTATCGATATGTGTACTCGCTTGTCAGCTGCAACGACTATAAA
GGATAAAAATCCGACCACAGTCATTGAGGCAATACTAAAAACGTGGATAT
CCGTCTATGGCTCATGTGAGAAGTTCCTCGTGGATAATGGAGGTGAGTTT
GCAAATGAGGAATTAATCAATCTAGCAGAACAGTTTGGAATCACGATAAA
GACTACTGCGGCTGAATCTCCCTGGTCAAATGGCATTGTAGAAAGACATA
ATCAAACACTTTCCAACATGCTTGATAAAGTACTAAACGATACAAAGTGC
AGCATTAACACTGCCCTTTATTGGTGTGTAAATGCAAAGAATTCACTGCA
TAACGAAGATGTGAGACAAAAgctaataaaagtttttgcagAAGAGTCTA
TCGAAGGAGATTTAGAAAGCAGTATGTCTTCTGTAAAAATCAAGTCAGAG
CCTGCGTTTTATACAAATGAGGCCCACCCAGACGATTACCAACCAACATC
ATCAGATGAAGAAGGTGTGTATTATGTTAAACGTAATTACAACCAAAGAT
TTTCCtcatcaaaattcaataaaaaaggaaataattgGCGCCAGGAGAAA
CCTGCTGTTCGAACTAAGGCAGATTATTCGAGAAAACCTGGCAAAAATCC
ACTTGACAAGAATGGCCGTGTTTCTAGATGTGTGATATGTGAAAGCGTAT
ACCATTGGCAACAAGACTGCCCAGAGAAACAAAATGATACGTACATGGTA
CATGAAATCGTCCTTCATAATGAAAGCAACAAACCAGGTCAACTTAAACA
TCTAGTATCAGAAACTTGGAATTGTGGCTTGCTCGATTGTGGTGCCAGTA
AGACGGTTTGTGGAGATGTTTGGCTTGAACAATATGTCAACTCTTTATCT
GATGAAGAAAAGAGAGAGGTAAAGCATCATCACAGTAAAAGCCTATATCG
CTTCGGAGACGGAGAACAAGTCCAGGCTTGTGGAAGAGTCTCAATCCCTG
CTATTATCGGCAACACAAAGGTCAAGATAAACACAGACGTCATACCAAAG
GACTTACCCTTGTTACTATCAAAATCATTCATGAAAAGAGCTGACATGAT
CCTGGATTTTCAGAATGACAGTGCAAATGCATTGGGGGAAACTGTTCACC
TAGCAACAACTTCAAGTGGACATTATACCATTCCTCTGACCAAACCACGT
CAAATAATTGCTTCAATAGACAAGCCTTTTGAAtgcaattttgttttcat
ttcgaAAGAGGACAAAAACATGTCCTCGATTGCTGAAAAACTTCACCGGC
AGTTTGCTCACCCATCTCTCAACCAAATCTTGTCTCTTATCAATAAAGCA
GGGGCACCATGGAGTAACAGCAAGGAGTTGATATCAGAAATCAAAAGAGT
AGACAAGGAATGTACAACATGCCAAATCTACAGAAGATCACCACCTCGTC
CTGTTGTTGGATTACCCATGGcatcaaaatttcttgaaacAGTTGCCATG
GACTTGAAATTCTACGATAAGAAAATAATTCTCCATCTTATCGATATGTG
TACTCGCTTGTCAGCTGCAACGACTATAAAGGATAAAAATCCGACCACAG
TCATTGAGGCAATACTAAAAACGTGGATATCCGTCTATGGCTCATGTGAG
AAGTTCCTCGTGGATAATGGAGGTGAGTTTGCAAATGAGGAATTAATCAA
TCTAGCAGAACAGTTTGGAATCACGATAAAGACTACTGCGGCTGAATCTC
CCTGGTCAAATGGCATTGTAGAAAGACATAATCAAACACTTTCCAACATG
CTTGATAAAGTACTAAACGATACAAAGTGCAGCATTAACACTGCCCTTTA
TTGGTGTGTAAATGCAAAGAATTCACTGCATAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:711245..713254 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-1842:481 |
| Aaloc | 1-312:1 |
|
