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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:609677..613680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007500 ID=XLOC_007500|Name=XLOC_007500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4004bp|location=Sequence derived from alignment at sc0000130_pilon:609677..613680+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTGGTGATTTATTGGACATTGCTAAAGGAAACACAACACTTGC
AAAGAGGAAGGTTAGTATTGAGTTATTGCAGACTTTAGTATGTCAGCTTA
TTGGCTTGCTGTCAAAGTTTGAGGGTTACATATATTTCATAgttttcgtt
ctaactattttctccatttttcaggcttgttttatattcctttttaaggt
tttatttgcatctcctaataacttttttcaaatggtttcttgttttttta
gaCTGATAAGTTGAATAGAGAAGGCGACGATGGTGGAAGTAACGTTTCAA
CAAGTGCTGTTGCCAAATTTCTTCAAAAGCAAAAGCTAGAGAAAGAAGCA
AGGAAAAGTAAGCAAAGATTGTGTATTTCAGTTTCATTCAACTCACCAGg
acatttaaagcaaaaaatgaaaatttaagttaaatcTTGGTTGATATATA
TACTTTTTTACCTCATTTTTACCTGACTAGTTTTGTTTATTGGGTTAAAA
GTATACTCCTGGTGGGAGTACTAATATTTGAGAATATGTTGGGTATGTAC
AGCCAGACCTCTGGAAACCAACCCTTAGATCGACTAATTTATTTTATCTA
AGTGCCCCCCAGTTGTAGTACTAGTatttgacgtcataattttaaagaat
CTGGACAGTCTATGGAATActtgaaaatctcaattttagctaaaaatgCC
TTCTAGTACTGGATGCCTTGCAATTGCATTGCATTTTGGAAGCAATTAGA
tatcagaaaaattacaaaattcagTTAAAGTGCTACTAGATTTTTCACAC
ACATATTCTTTCTGTAGGAGCTGAAGAGGAAGAAAAGAGAAAGCGTATTG
CTGCTCGAGTCAGCGCAAGCATTGGCaagaaggaaaaaccaaaaccacca
cccaaacctgaagtgaaaaagaaaccttcgaaagATGTCGATAAAGTCAA
ATTTAAAGTCCATGATGCCCATAAAAAGAAGGATGCTCCTCCTAGAAagg
atgaaaaaatcaaaaaagtgtcATCCAAAGAACACCAGATTCCAAGATCT
AAACCCATTCCCAAACTGAAAAGTGCTGAGTCACTGAAAagtgctgagtc
atcaaaaagtAGTGATAAACAtaaaaatgaacatcgaaaagagaaagaaa
ggacagctctaattaataaagataaaatgaaaaagaaagctaaaCGCTCA
TCACAGAATAATGCTAATAACGGTTtcaattttaatgatttgatgAAATT
CGCGAAACTGAACTCTGAGAGTCCTGGATCGGGTTCTGCTATCGTgaaac
aaaaggaggaattgaaatcaaaacagagagaagaacaaaaaatgagatat
aaagaagaacagagaatgaaaagtaaagaaatattgaaaatgaaaacgca
AGGTAAACCGAGAGTGGAACAAAATCCTTTTGATCCTGACCGCAACGTCA
AAATTAGCCGGAAAAGACCGGAGGAGTCCCGTCCGCAAGGAGGACCACCC
GCAAAACAATCGAAACCCATGGACAATAAAAAATCGTTCGAACATAAAAA
AGTGTTACCCAGGGAAAAGGAGATTCAACTTGCAAAACAACAGATGATGA
AAAATTCTAGtaatagtataaataataggaataataataataacaacaat
aGAAACTTGACgtcgtcatcaaaaatacgacCTGCCCAACAGAAAATAGC
ATCAAAGGACCTTGCGCGATGTGATGTAGATGAACGGCCTAGACACGGTC
TGTTGGTGGAGACAGTCTCGGTTAAAAGTAATAGCAAATTTAAAGAAAGA
CCTTCAAATATTTCGAGAACAAGAGATGACGATCGTGGTATTGCTGCTCA
ATTTAGAGGTGGCCCACCGGCCCGTAGGAAAAACGGTAATGGTGGTGGAG
GCGGGATTGCCGCCCAGAATAAATATCGTAGTGATTCTCCGCCCGTTCaa
aagaagaaaggtaataagaagtctgctgaagatttcgaagatgaatttga
aaaagaagagaagaTGTTAGCTCGAAAACGAAAACTTTACGAAATGAGGC
GTGTTACAGGTATATCaagaaaactttattttgaCGGATCTTGCTTTTTC
ATTaaagatttgattgatattttctttaaaaaatcaacccTGGATCTGAC
CAGAGGCTCATTCTTACCATGTCATGAAAATCATTATTCCTGCCAACGCT
ACTGCCTAAATATTTCTCTGAAATAATCCTCAAGGAATATAAACGTGTTA
AGTGGCCTCCAGAAGACGAAATGCTTTGATTACCTTTTGGATAAGTCTTT
AAATACAGCAGAGTCTCTTCAtatcgaacctctataactcgaaattctct
taactcgaacaagtttgtgCTTCCgtgcatgttcgagttatggagattct
actctctaaagaaaaaatcttatcACTTTAGGCAACAAGCAATTGACGGA
AGACGATTTGTTTGATGGCGATTACGATCTCGACGAAGAAGAAGACGAAG
ATGACGAATTCATTGACGATACGGGAGAAAATGGAAACTATTCGGGATAT
ATCAGATCTATATTCGGTTACGATCGCAGGAGGTACTTTATAGCACTTTA
TATAGTATGGTTAAATTTCGCTGTTCCGTTAAAAAACCATCCAGTGGACG
AACCtttccaagtaaaaaaaaaatattgaaaatgtgtttataccccctgg
aaaatggcaaaatttgcaaaaatacctttggaaaaattcttttcacacct
taaaatccttaaaagtaaaatcagtcttttaccccccccccctcctggaa
attttagaataactttttaccccttttAGCCCTTTTTAcccaaatgagaa
aaaaaccctggaaatttttctcggattaccctctggaaatgttcgtctac
cccccccccctgtatggatataaagtAGAATAGCCCATGTGACAGTGaat
aatagtgaggttaagtaaatcggtaaaatcacgccGACAGACAAAAATTG
TAAtaaggctagtgagtttcaaccaatcaaatattttgactaGCCCATTA
CAactttcgtccgtcgtcgtgattatcctggtattaTCAACCTCAGTAAT
CTCTTTTGAGGACttcattttctgtaaaaaaaaatttttaaccacTATTG
GTTGCTTGGTTCAAAATGTGAGCACATTTTGGTTGGTCCATTCTGACTAC
TAAGGGTCTGATCAATATCACTAAATCTGTAATAAATGCTCTGGTAGAAT
CTGCAAGGCGTCTAAATTGATTATTCTATCCAGAGGGTTGACAATTGTAA
ACTTAGCTCATCAACATTGGGGGTATTTTATTTTTGGAGTCCCAATTTGG
AATAACATTCTCGCTCAAAACTTAATTGATTATCATTATGTGATGTTTCA
GATACGACGATTCAGATTCGGATATAGATAACATGGAATCGAGTTATGGC
CagattgaaaaagaagaagctcGAAGGTTTGTTATCTTattcttctttaa
aaaatatattgtgtGTAAAATTATTGGTAGCTGTTTGTCAAGGTCGGTTA
AAAAAGATTCTTGCAAGTTCCTGCTCATTTGTGGTCCTTAAGATGCTGTA
GCTATACTTTCGGcgcacaaactttcgcgagcagaaactttcgcaatttt
CACGAaaagggcaattcgcgaaagtttatgctcgcgaaaagcattttttc
ctcaaattcgcgaaagtaaatgtcgcgAATTTCGCGAATGTCGCAAATCT
TTCGACCTCGTGAAAGTTTCAATCTCGTGATGTAAGAAATACTATTTTGT
GGATATGAAAAGGTTTATACCTGGAGAAGCTAGTACAAGATGCTTGTACA
ATATGATACGACTTCTAAGAAAGTAGCTGGACGCCTAGCCTTAAAACtga
cttctttttctttcagtgcACGCATAGCGAAGATTGAAGATGAATACGAG
AAGATGAAAGAAGAGGAAGAACTAGCGCGCATCAAAGCGcgaaagaaaaa
gtga Coding sequence (CDS) from alignment at sc0000130_pilon:609677..613680+ >XLOC_007500 ID=XLOC_007500|Name=XLOC_007500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3444bp|location=Sequence derived from alignment at sc0000130_pilon:609677..613680+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTGGTGATTTATTGGACATTGCTAAAGGAAACACAACACTTGC
AAAGAGGAAGATGGATTTTGGTGATTTATTGGACATTGCTAAAGGAAACA
CAACACTTGCAAAGAGGAAGaCTGATAAGTTGAATAGAGAAGGCGACGAT
GGTGGAAGTAACGTTTCAACAAGTGCTGTTGCCAAATTTCTTCAAAAGCA
AAAGCTAGAGAAAGAAGCAAGGAAAAaCTGATAAGTTGAATAGAGAAGGC
GACGATGGTGGAAGTAACGTTTCAACAAGTGCTGTTGCCAAATTTCTTCA
AAAGCAAAAGCTAGAGAAAGAAGCAAGGAAAAGAGCTGAAGAGGAAGAAA
AGAGAAAGCGTATTGCTGCTCGAGTCAGCGCAAGCATTGGCaagaaggaa
aaaccaaaaccaccacccaaacctgaagtgaaaaagaaaccttcgaaagA
TGTCGATAAAGTCAAATTTAAAGTCCATGATGCCCATAAAAAGAAGGATG
CTCCTCCTAGAAaggatgaaaaaatcaaaaaagtgtcATCCAAAGAACAC
CAGATTCCAAGATCTAAACCCATTCCCAAACTGAAAAGTGCTGAGTCACT
GAAAagtgctgagtcatcaaaaagtAGTGATAAACAtaaaaatgaacatc
gaaaagagaaagaaaggacagctctaattaataaagataaaatgaaaaag
aaagctaaaCGCTCATCACAGAATAATGCTAATAACGGTTtcaattttaa
tgatttgatgAAATTCGCGAAACTGAACTCTGAGAGTCCTGGATCGGGTT
CTGCTATCGTgaaacaaaaggaggaattgaaatcaaaacagagagaagaa
caaaaaatgagatataaagaagaacagagaatgaaaagtaaagaaatatt
gaaaatgaaaacgcaAGGTAAACCGAGAGTGGAACAAAATCCTTTTGATC
CTGACCGCAACGTCAAAATTAGCCGGAAAAGACCGGAGGAGTCCCGTCCG
CAAGGAGGACCACCCGCAAAACAATCGAAACCCATGGACAATAAAAAATC
GTTCGAACATAAAAAAGTGTTACCCAGGGAAAAGGAGATTCAACTTGCAA
AACAACAGATGATGAAAAATTCTAGtaatagtataaataataggaataat
aataataacaacaataGAAACTTGACgtcgtcatcaaaaatacgacCTGC
CCAACAGAAAATAGCATCAAAGGACCTTGCGCGATGTGATGTAGATGAAC
GGCCTAGACACGGTCTGTTGGTGGAGACAGTCTCGGTTAAAAGTAATAGC
AAATTTAAAGAAAGACCTTCAAATATTTCGAGAACAAGAGATGACGATCG
TGGTATTGCTGCTCAATTTAGAGGTGGCCCACCGGCCCGTAGGAAAAACG
GTAATGGTGGTGGAGGCGGGATTGCCGCCCAGAATAAATATCGTAGTGAT
TCTCCGCCCGTTCaaaagaagaaaggtaataagaagtctgctgaagattt
cgaagatgaatttgaaaaagaagagaagaTGTTAGCTCGAAAACGAAAAC
TTTACGAAATGAGGCGTGTTACAGGAGCTGAAGAGGAAGAAAAGAGAAAG
CGTATTGCTGCTCGAGTCAGCGCAAGCATTGGCaagaaggaaaaaccaaa
accaccacccaaacctgaagtgaaaaagaaaccttcgaaagATGTCGATA
AAGTCAAATTTAAAGTCCATGATGCCCATAAAAAGAAGGATGCTCCTCCT
AGAAaggatgaaaaaatcaaaaaagtgtcATCCAAAGAACACCAGATTCC
AAGATCTAAACCCATTCCCAAACTGAAAAGTGCTGAGTCACTGAAAagtg
ctgagtcatcaaaaagtAGTGATAAACAtaaaaatgaacatcgaaaagag
aaagaaaggacagctctaattaataaagataaaatgaaaaagaaagctaa
aCGCTCATCACAGAATAATGCTAATAACGGTTtcaattttaatgatttga
tgAAATTCGCGAAACTGAACTCTGAGAGTCCTGGATCGGGTTCTGCTATC
GTgaaacaaaaggaggaattgaaatcaaaacagagagaagaacaaaaaat
gagatataaagaagaacagagaatgaaaagtaaagaaatattgaaaatga
aaacgcaAGGTAAACCGAGAGTGGAACAAAATCCTTTTGATCCTGACCGC
AACGTCAAAATTAGCCGGAAAAGACCGGAGGAGTCCCGTCCGCAAGGAGG
ACCACCCGCAAAACAATCGAAACCCATGGACAATAAAAAATCGTTCGAAC
ATAAAAAAGTGTTACCCAGGGAAAAGGAGATTCAACTTGCAAAACAACAG
ATGATGAAAAATTCTAGtaatagtataaataataggaataataataataa
caacaataGAAACTTGACgtcgtcatcaaaaatacgacCTGCCCAACAGA
AAATAGCATCAAAGGACCTTGCGCGATGTGATGTAGATGAACGGCCTAGA
CACGGTCTGTTGGTGGAGACAGTCTCGGTTAAAAGTAATAGCAAATTTAA
AGAAAGACCTTCAAATATTTCGAGAACAAGAGATGACGATCGTGGTATTG
CTGCTCAATTTAGAGGTGGCCCACCGGCCCGTAGGAAAAACGGTAATGGT
GGTGGAGGCGGGATTGCCGCCCAGAATAAATATCGTAGTGATTCTCCGCC
CGTTCaaaagaagaaaggtaataagaagtctgctgaagatttcgaagatg
aatttgaaaaagaagagaagaTGTTAGCTCGAAAACGAAAACTTTACGAA
ATGAGGCGTGTTACAGGCAACAAGCAATTGACGGAAGACGATTTGTTTGA
TGGCGATTACGATCTCGACGAAGAAGAAGACGAAGATGACGAATTCATTG
ACGATACGGGAGAAAATGGAAACTATTCGGGATATATCAGATCTATATTC
GGTTACGATCGCAGGAGGCAACAAGCAATTGACGGAAGACGATTTGTTTG
ATGGCGATTACGATCTCGACGAAGAAGAAGACGAAGATGACGAATTCATT
GACGATACGGGAGAAAATGGAAACTATTCGGGATATATCAGATCTATATT
CGGTTACGATCGCAGGAGATACGACGATTCAGATTCGGATATAGATAACA
TGGAATCGAGTTATGGCCagattgaaaaagaagaagctcGAAGATACGAC
GATTCAGATTCGGATATAGATAACATGGAATCGAGTTATGGCCagattga
aaaagaagaagctcGAAGtgcACGCATAGCGAAGATTGAAGATGAATACG
AGAAGATGAAAGAAGAGGAAGAACTAGCGCGCATCAAAGCGcgaaagaaa
aagtgatgcACGCATAGCGAAGATTGAAGATGAATACGAGAAGATGAAAG
AAGAGGAAGAACTAGCGCGCATCAAAGCGcgaaagaaaaagtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:609677..613680 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1654-1740:3918 |
| Aaloc | 1579-1650:3403 |
| Aaloc | 1429-1575:2434 |
| Aaloc | 511-1425:1144 |
| Aaloc | 472-498:1117 |
| Aaloc | 169-465:820 |
| Aaloc | 61-165:252 |
| Aaloc | 1-60:1 |
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