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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000272_pilon:110940..114424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007492 ID=XLOC_007492|Name=XLOC_007492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3485bp|location=Sequence derived from alignment at sc0000272_pilon:110940..114424- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACCATATAATTTCTTTGCAAATAATGCTATAGACTATCTCATGAT
ACAAAGTCAAAATGAAAAAGCAATCCAATGTACAGCATGCTCTGATAAAA
CAGATGCTGTCTCCAGATGTGTTGAATGTTCTGAATTTCTATGTTTGTGT
TGTGTGACAGCTCACAGGAGAATCAGAGTAACGAAAGATCACAAAATCAT
CCCGTTGGATACTTTGAGATACGATCAAAGCATGGTTCATAGGCCAGTTT
ATTGCCCGACACACTCACCTGAGGTTTTTACCTATTTCTGTGAAGTTTGT
AAAGAACTGGTTTGTAAGGATTGTACCATTTTAGAACATCGTGGACATAA
ATATGAAAGTAAGTAGCCTGTTTGGTTTACTTTAATATCTTGCATTACAC
CTTAAGAGGGAAATTCTGGAAAACGACAAAATTTCTCTTTCCTTTAAGAT
TAGGCCTTGGCAATAAGATATATTCAAGTCTATTTATGTTTTTTTTTTAC
ATGCCTATCTTAGACTGGTAGATCTGCAAGACGTATGCGTAAATAATTTC
AGAATGTTATAAACCATTTCTTGAATTCAGGATTGAGTGAGGCATTGGAG
AATCAAAAACCATCAGTCATGAAATTATTGGCAACGAACGAGAAAGAAAA
AATCCCACCCATAGCGCGCGCACTTGATGATGTCCAAGATATGGCCGCCA
GATTACACGCGCGGACGATTGCAACAAAACAAGCGGTCCGCTCGTGTACT
GAACGTTGTATAAGAGAGATCGAAGAACGTTGTAAGATTTTGCTTTCAAA
TATTGATAATTTGTATCGAGAGAAGAGCGACGTGTTACATAAACAACAGG
AGGTATTACAAGGTAAGATAAAGTTGACAATTTAGCCTTTTAAATAGAAT
TACATGGCAACTAAACTTGCCTAGTTCTCGATTTTTTCCAAACAGATTTT
TTCAGAGAGGTTGATTTTTAGTGTTAAAGAATAATTGGAGGTCTCAAAGA
AGATAATCATGTTGGTAATCATTTCAAGGCGAGACCCGAGGTGGTTCGTT
ATTTTAAAAGCCTATTTGTATCTGTTACGGGAAGTTTTAATCTTTTTCCG
TTCTTTTAATAACTTGGAAAAAGTAATTTCTTTGTTTGAAGACAAGTCTG
AGGATGTACATGATAATTCTTTCTCTTAATTTTTTTTTGCAGAAAAACTG
ATGAAAAACAAGGCAGCGAATCAATTTGTGAACTATGCATTCCAACATGG
AAGCGAGGCGGAAATATTTGAATTGCTAGACCTGATGAAAACTAGACTGA
CCGATCTCAATGATGAGGACTTAGGCTACGATGAGCCTGAAGAAAATGAC
GTCATTGATCACCAGTTTGATTCCAAAGCTGTCGAGCACATAGCTGAAAA
CCTCGGCAAAATTGCCACATCTAGTGTTTTCTTATCATACACAAAACTCT
ATGGACCAGGTGTACGAACAGCCAAAGTAGAGATCGAAACATTTTTTATG
ATAGAAGTTTTTGATCGAAAGAAGGAGCGCTGTTGTGATCATTTCTCACC
GGGCGCCATTAAAGTTAAAATTCACGCACCAGAAGGGTTCTTAATCAACA
ACAAGATCACTGATAATCGTGATGGTACTTTTACTGTTCGGTATACTCCT
GTCACGAAAGGTCGATATGATGTTACCGTCAAAATCAGGGGCAAATCATT
TCCAAAGAATCAGTTCTCTGTCAGAGTATTCGAAGGCATTGATTATCTCA
AGGTAAGCTTTTGTATATAATTCTAATATTAGAGAATCACGTTATATCTA
ACGAACGCTACCGCGGAACAATCTTAAGGAACTGCTCACTAATGAAAAGC
TTTTTTTTGCTATTTAGGTTGTAGATTAAAATATACAAACACAGATGAAA
GTTATAATTAAAGATCTAGTCAAAAACCTTGAAGTTTTGGGAAATGCTGC
GAGCTTGAAAAACCACTATATACTTATTAATTAAGATTTGAAGTGGGGTT
TCAAGGTTACAGGATTACCGTAAAATGGAATTGGCTTAAGTGGCTTAATT
ATTCAGAGCTATTGAAGAATATCTCACACTCGGAGTTTCATGACTCGGTG
CCAGTCTCCGGTGAAAATGAGCTCAAATCAACATATAACTATGAGAAAAT
TAATCAACTGAACTAAATTAGAGTTTTCAATTTTCAGATCGGCAGCAATT
TTTTATGTTTCGGTGAGCGTGGCGTCAAAAACAGTGAATTTAAGCAGCCA
TATGGAATTGCAACAAATTCACAAGGTCAAATCTACGTGACCGATAAAAC
TAACAATCGAGTACAAATCTTCGATAAATTCGGCACCTTTCTATCAGAGT
TCGGATCACGTGGTACAAAACAAGGTCAATTTTCAGGACCGGAAGGAATA
GCAGTTGATCAAGCAGGCATGATCTTCGTAGCTGATACAGAAAATCACCG
AATACAAGCTTTCAATGCAAATGGAACATATCATTCAAAGTTTGGTACAA
AAGGTATAAGATATATTAGTATCATGTAACATTGAGATTTAGTTTTTAGT
TCCCTTCATAAATGAGGCTGTCTTTCTTCCTACAATATTTGATTATCAAA
CCTGATTTCCGAGCAGATTCTGATTACTTCGCACTGGCACGTTTGCACGA
TAAAGGTCATGGCTCTGAAAAAGAATCTGCCCAGGTTGGAGCACAGCTTT
GATATTTTTCATCAAGATTTGGATTGAATATCAAATGTGCTTTTGAGGGC
GGTGATTTTCTAAAGGAAAATACATGCACCAAAATCAAACATCAATCATT
AGAACCTAGTCGCTTTCGTTTTCGTTTCTATAACACAGCGCGGTATGCAG
AGAATAAATGATCTGTTAATAAATCTTTAAACACGCAATTTCACAAGTTA
CTCTCGTAATGTTTCAACAAAGGAAAAAATATACCTTTTTAAAATTTCAT
TCCATTAGGTAGTGAAGAAGGAGAGCTTCTCAGTCCATGCGGTATTGCTA
TTGATAAGATCGGTAACATATGTGTGGCTGATCGAGGCAACCATCGAGTC
CAAGTATTCACACCAGAGGGTAAAAGTTTATTATCATTTGGTTCCTATGG
TGACCAATACGGACAATTAAATTCACCGAGTTTTCTCGCCATTAACAATG
ATAATTGGTTCATTGTTGCCGACAATGGGAACAATAGAATCGTTTGTTAT
GATAGCAATGGGTTGTATGCTCAAGAGACTGGTGCCAAGGGTTCGGACCC
AGGCGAGTTTTCTAAACCAAATGGTATTGTGGTCGATCAAGAAGGTTTTA
TCATAGTCTCTGATACAGGAAATAACAGGGTGCAGGTGTTAACGCCAGAT
TTGAAATATTTCAGTCAATTTGGTTGCCATGGTAATAATGATGTTGAATT
TAAACAGTTAACTGATGTAGCTTTAACTCAAGATGGTAGAGTTGCAGTGA
GCGATACAAACAATTACAGGGTACAAGTGTTCTAG Coding sequence (CDS) from alignment at sc0000272_pilon:110940..114424- >XLOC_007492 ID=XLOC_007492|Name=XLOC_007492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4086bp|location=Sequence derived from alignment at sc0000272_pilon:110940..114424- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACCATATAATTTCTTTGCAAATAATGCTATAGACTATCTCATGAT
ACAAAGTCAAAATGAAAAAGCAATCCAATGTACAGCATGCTCTGATAAAA
CAGATGCTGTCTCCAGATGTGTTGAATGTTCTGAATTTCTATGTTTGTGT
TGTGTGACAGCTCACAGGAGAATCAGAGTAACGAAAGATCACAAAATCAT
CCCGTTGGATACTTTGAGATACGATCAAAGCATGGTTCATAGGCCAGTTT
ATTGCCCGACACACTCACCTGAGGTTTTTACCTATTTCTGTGAAGTTTGT
AAAGAACTGGTTTGTAAGGATTGTACCATTTTAGAACATCGTGGACATAA
ATATGAAAATGTTACCATATAATTTCTTTGCAAATAATGCTATAGACTAT
CTCATGATACAAAGTCAAAATGAAAAAGCAATCCAATGTACAGCATGCTC
TGATAAAACAGATGCTGTCTCCAGATGTGTTGAATGTTCTGAATTTCTAT
GTTTGTGTTGTGTGACAGCTCACAGGAGAATCAGAGTAACGAAAGATCAC
AAAATCATCCCGTTGGATACTTTGAGATACGATCAAAGCATGGTTCATAG
GCCAGTTTATTGCCCGACACACTCACCTGAGGTTTTTACCTATTTCTGTG
AAGTTTGTAAAGAACTGGTTTGTAAGGATTGTACCATTTTAGAACATCGT
GGACATAAATATGAAAGATTGAGTGAGGCATTGGAGAATCAAAAACCATC
AGTCATGAAATTATTGGCAACGAACGAGAAAGAAAAAATCCCACCCATAG
CGCGCGCACTTGATGATGTCCAAGATATGGCCGCCAGATTACACGCGCGG
ACGATTGCAACAAAACAAGCGGTCCGCTCGTGTACTGAACGTTGTATAAG
AGAGATCGAAGAACGTTGTAAGATTTTGCTTTCAAATATTGATAATTTGT
ATCGAGAGAAGAGCGACGTGTTACATAAACAACAGGAGGTATTACAAGGA
TTGAGTGAGGCATTGGAGAATCAAAAACCATCAGTCATGAAATTATTGGC
AACGAACGAGAAAGAAAAAATCCCACCCATAGCGCGCGCACTTGATGATG
TCCAAGATATGGCCGCCAGATTACACGCGCGGACGATTGCAACAAAACAA
GCGGTCCGCTCGTGTACTGAACGTTGTATAAGAGAGATCGAAGAACGTTG
TAAGATTTTGCTTTCAAATATTGATAATTTGTATCGAGAGAAGAGCGACG
TGTTACATAAACAACAGGAGGTATTACAAGAAAAACTGATGAAAAACAAG
GCAGCGAATCAATTTGTGAACTATGCATTCCAACATGGAAGCGAGGCGGA
AATATTTGAATTGCTAGACCTGATGAAAACTAGACTGACCGATCTCAATG
ATGAGGACTTAGGCTACGATGAGCCTGAAGAAAATGACGTCATTGATCAC
CAGTTTGATTCCAAAGCTGTCGAGCACATAGCTGAAAACCTCGGCAAAAT
TGCCACATCTAGTGTTTTCTTATCATACACAAAACTCTATGGACCAGGTG
TACGAACAGCCAAAGTAGAGATCGAAACATTTTTTATGATAGAAGTTTTT
GATCGAAAGAAGGAGCGCTGTTGTGATCATTTCTCACCGGGCGCCATTAA
AGTTAAAATTCACGCACCAGAAGGGTTCTTAATCAACAACAAGATCACTG
ATAATCGTGATGGTACTTTTACTGTTCGGTATACTCCTGTCACGAAAGGT
CGATATGATGTTACCGTCAAAATCAGGGGCAAATCATTTCCAAAGAATCA
GTTCTCTGTCAGAGTATTCGAAGGCATTGATTATCTCAAGAAAAACTGAT
GAAAAACAAGGCAGCGAATCAATTTGTGAACTATGCATTCCAACATGGAA
GCGAGGCGGAAATATTTGAATTGCTAGACCTGATGAAAACTAGACTGACC
GATCTCAATGATGAGGACTTAGGCTACGATGAGCCTGAAGAAAATGACGT
CATTGATCACCAGTTTGATTCCAAAGCTGTCGAGCACATAGCTGAAAACC
TCGGCAAAATTGCCACATCTAGTGTTTTCTTATCATACACAAAACTCTAT
GGACCAGGTGTACGAACAGCCAAAGTAGAGATCGAAACATTTTTTATGAT
AGAAGTTTTTGATCGAAAGAAGGAGCGCTGTTGTGATCATTTCTCACCGG
GCGCCATTAAAGTTAAAATTCACGCACCAGAAGGGTTCTTAATCAACAAC
AAGATCACTGATAATCGTGATGGTACTTTTACTGTTCGGTATACTCCTGT
CACGAAAGGTCGATATGATGTTACCGTCAAAATCAGGGGCAAATCATTTC
CAAAGAATCAGTTCTCTGTCAGAGTATTCGAAGGCATTGATTATCTCAAG
ATCGGCAGCAATTTTTTATGTTTCGGTGAGCGTGGCGTCAAAAACAGTGA
ATTTAAGCAGCCATATGGAATTGCAACAAATTCACAAGGTCAAATCTACG
TGACCGATAAAACTAACAATCGAGTACAAATCTTCGATAAATTCGGCACC
TTTCTATCAGAGTTCGGATCACGTGGTACAAAACAAGGTCAATTTTCAGG
ACCGGAAGGAATAGCAGTTGATCAAGCAGGCATGATCTTCGTAGCTGATA
CAGAAAATCACCGAATACAAGCTTTCAATGCAAATGGAACATATCATTCA
AAGTTTGGTACAAAAGATCGGCAGCAATTTTTTATGTTTCGGTGAGCGTG
GCGTCAAAAACAGTGAATTTAAGCAGCCATATGGAATTGCAACAAATTCA
CAAGGTCAAATCTACGTGACCGATAAAACTAACAATCGAGTACAAATCTT
CGATAAATTCGGCACCTTTCTATCAGAGTTCGGATCACGTGGTACAAAAC
AAGGTCAATTTTCAGGACCGGAAGGAATAGCAGTTGATCAAGCAGGCATG
ATCTTCGTAGCTGATACAGAAAATCACCGAATACAAGCTTTCAATGCAAA
TGGAACATATCATTCAAAGTTTGGTACAAAAGGTAGTGAAGAAGGAGAGC
TTCTCAGTCCATGCGGTATTGCTATTGATAAGATCGGTAACATATGTGTG
GCTGATCGAGGCAACCATCGAGTCCAAGTATTCACACCAGAGGGTAAAAG
TTTATTATCATTTGGTTCCTATGGTGACCAATACGGACAATTAAATTCAC
CGAGTTTTCTCGCCATTAACAATGATAATTGGTTCATTGTTGCCGACAAT
GGGAACAATAGAATCGTTTGTTATGATAGCAATGGGTTGTATGCTCAAGA
GACTGGTGCCAAGGGTTCGGACCCAGGCGAGTTTTCTAAACCAAATGGTA
TTGTGGTCGATCAAGAAGGTTTTATCATAGTCTCTGATACAGGAAATAAC
AGGGTGCAGGTGTTAACGCCAGATTTGAAATATTTCAGTCAATTTGGTTG
CCATGGTAATAATGATGTTGAATTTAAACAGTTAACTGATGTAGCTTTAA
CTCAAGATGGTAGAGTTGCAGTGAGCGATACAAACAATTACAGGGTACAA
GTGTTCTAGGTAGTGAAGAAGGAGAGCTTCTCAGTCCATGCGGTATTGCT
ATTGATAAGATCGGTAACATATGTGTGGCTGATCGAGGCAACCATCGAGT
CCAAGTATTCACACCAGAGGGTAAAAGTTTATTATCATTTGGTTCCTATG
GTGACCAATACGGACAATTAAATTCACCGAGTTTTCTCGCCATTAACAAT
GATAATTGGTTCATTGTTGCCGACAATGGGAACAATAGAATCGTTTGTTA
TGATAGCAATGGGTTGTATGCTCAAGAGACTGGTGCCAAGGGTTCGGACC
CAGGCGAGTTTTCTAAACCAAATGGTATTGTGGTCGATCAAGAAGGTTTT
ATCATAGTCTCTGATACAGGAAATAACAGGGTGCAGGTGTTAACGCCAGA
TTTGAAATATTTCAGTCAATTTGGTTGCCATGGTAATAATGATGTTGAAT
TTAAACAGTTAACTGATGTAGCTTTAACTCAAGATGGTAGAGTTGCAGTG
AGCGATACAAACAATTACAGGGTACAAGTGTTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000272_pilon | genome | sc0000272_pilon:110940..114424 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1519-2043:526 |
| Aaloc | 1201-1515:1299 |
| Aaloc | 643-1200:2292 |
| Aaloc | 361-639:2904 |
| Aaloc | 1-357:3486 |
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