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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:721272..726416- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007482 ID=XLOC_007482|Name=XLOC_007482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5145bp|location=Sequence derived from alignment at sc0000130_pilon:721272..726416- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATTAT
ATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTT
TATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAA
GATGTATCTAAATCACGTAAGTTGTTAGGTATTTATTCAAGTCACAATTT
TAATCTTGGTCTTCGTTGAAGTCTTTATTCCATGTGCTCTAATCAGATCG
ATTTGTCGCGTTATATATTTACATGGAATTTGTCATATGTGCATCTAAAA
TTTAGAAGTGGTTTTCTTCCAATTTTAAGAAAATTGGTGTATTTATTCAA
GTCACAATTTTAATCTTGGTCTTCGTTGAAGTCTTTATTCCATGTGCTCT
AATCAGATCGATTTGTCGCGTTATATATTTACATGGAATTTGTCATATGT
GCATCTAAAATTTAGAAGTGGTTTTCTTCCAATGAAGCTTGGTACTCACG
TATTAAAAAAAAAGTGGTGTTTAACACTTTTTGCGTGCGTTTAACACTAG
ACTCGTGCGACTTTGGGAAAAACATCCAAATGTACAAGAGTAATTATGTG
AACTTAGTCCAGTACCATCTCTAGGTGTGGACACTATCATTCATTTTCAT
TGATTTCATTTCAGTCATCCTTACATCTGTGCAAAACAAGGAACAATCTG
GGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATGTGATCGAT
CAAGGTAAACTTATGCAACCCTAATAAATACATCCTCGCGACTTTTGTTT
AACAAATTGCTTACTTTCGGGTACCTAATAAGTGGGGGGGGAGTGGAAAA
GTTCTCAAAACTTAATAAGCGGGAGGAGGGGGCTGGAAAAGAAATGTCCT
TGGTGGAAATTTTTTTGAAAAGGAGCAGAATTAGAGCAAAAGAGAGACCT
TTTATTTTAAAGACATTTTTCTAAAAATTGATAAACGGGGAGAGGTTGAA
ATAAGAATATCCTGGGTTGTAAAATTTTCGAGAAATTAATAAGCTAGGGG
GACGCTCAATAGGTACCCGAGAGTAGACTGTTCGAACATGCACGGGAACA
AATTTGTTCAAATTAAGGAAAATTTCGAATAATGGAGATTTGTTCATAAA
GCATTGTTATTAATGGAACAGAAAACATGTTTGAGTTGAGGAGGCATTCG
AGTTAAAGAGAATCTAGTTTTGAAGCGCCGAGACAAAAAACGGGCGTGAG
TTGAACAAGATGGGAGGCTGATATATAGGCCTCGAAAAAACTTAGTAAAC
ACTGTTACCCCTTTTCACGGATCTTGTAATGTTTCAAAATTTCTACTCTC
TATCACTGTTCCAATATCATTTGCTTTTTATTTTCATAGCATTACTTGAA
AGTGAATTAAACAAAGTTGATGAAGAATTTAACCGTATACAAAAATTGAT
CACAATTTGGGAAAAGAACTTAAGAGGTATGTTATATTTCTAAGTTCTAG
TCCATCATTTAAATCATATCAGTATTACCTTATTAGTAGGGGGCTAGAAA
TACAGCCGCTTCAAGTTCAAAAGCATACTGACCTCAGTACTATCAAGACA
AGATTTGACGTCAAATCACAGTAGAGCTGACAGTTAGTTGGTCTTAAAGC
GACTGTATTCCTTTGTGTGTTTTAGTCAGAGAGTTGTTGTAATACAATTT
TTTGCTCAGAATTTCATTCTCTATCAGATGGTACCAATCATTTTCGTTTA
TTTTGACTTTTGAAAATAAGCTATTCCTCTACCCCTTATTTTCCCTTGCA
GTTTTGCCAATGGCGTCACTATTTTGGTCATAAAAAGTTTTCCCGGGCCT
AATCCGCGTCCTCCCTCTCAAAAATATCTTGTAATATACTGTTCTTTTGA
ATAGACTAAAAATGGCTAGGTCGTAGAAAAGATGTCACAGAACCCCAGGC
TTGGCCCCCTACTATATCGGAGTTTTTGATTTTTCTAAAAAAAGCGATGC
ATTGTGGGATTGTTTCGAGTGTATTACAATAGAATTCCCTCGAGGAATTC
CTAAGAGATTTCTATTGTAATACACTCGAAACAATCCCACAATGCATCGC
TTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTATACAAGAAGTTG
ATTTCTTTCTTTCTTCTTCTGTTTGTTTCGGTACAATATATTGAGACAGA
CTTTATTTGTATTCATTCTGGTTAGCTTCGTGTAAGTAAGTAAGTCTGCG
ACCGCAGTCGGTGGCGAGCCGAAGGCTCCTCTTTCGATAGCTATCTACCC
GAAGGTAGGGGAAGACGTCACTCTTTCTCCCTGGATTGCTCCACTTACCC
TTGACTCTTCTCTTAATAATGCTGAGCATCAAGCAGAGAGGCATGAAATA
CCATTTTGGAAATCTTTGGTATAACCCGGCTGGGGGTTGAACCCACAACC
TTGCAAACTGTAGCTGGATATCGTACTACTTCGAATAAACGCCCCATTTT
TTTAAACCTCCCCTTGAATAAACGCCCCTTTTTGAGAAAAGACTTTGGAT
GAGTGCCCCCTCCCGCTCGATTAAAAGCCCTTCCTCAAAACCAAAACAAA
AATTGATAAATGTCCGGGATGTTTATTTGATGTTTGACTGGAAAAGTTCA
TGACAAATACACAATATAAGAAAGATTTACCTTTCGATATCCATTTTAGT
CTTATACAGCAAAGAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTA
CGATACAAACAGAAACCAGCACATTGGAGCATGATCTTATTATTCTATCA
GAAAAATCAATATCATTAAAAGACTTGATACCCAAAAATGCCAACAAAGC
TATCAAGAAAAAGATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTC
AGAAAGGCTTGGTAAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAG
AGATGTTCTCAAGATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAA
AGTTAACGATATTGGAGAAGTCCATGAGCAATGTGATGGTACGTAAGCGT
CTTGTTTTAGCCTCTTTTGTTTCTACGTTCGAGAGGATTAAAAAGTTTTG
TCAAAGTGCAATTTTATCAAAAGAAACTGACCAAAATTTCAAGGGGTTAA
CAAATTATTCCTTAGTAAGATTTTGCAGAATAATTACTGTGACAGGGATC
TATGGATCACATTGCATGAGCTTGAAATTTGTACGAATCTATTTCCACCA
AGCCAGGTTGGGTGTTCCTATTTTAGTTTCTTCTTTATCTTAACCTTTAT
AGATTTCACTCAGGAGTGTGTGGACAGCTACAAGGAGATTTTAAACAAAT
TTGACGACTATACTAAAGACCATGTCAGCCCATTAAAAACCCAACTTCAT
GATCTCAAAAAATCAAAATGTAGTCAATCAAAAACAATTCGTAAAACTTT
GGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACAACATTGGATTGAGA
CCATTTTATCAAAACTCAAGGAATTGATTGAACAAAAGCTGACACAGCTT
AGTGATGGTTCTAAATACAATTTTGATGTTTTGAATGGACTGAGACTTGA
TTCGAAAGGTATTTGATCATTTTTAACTTAACTGAGAGCCAATTTATTAA
TACAAATCTTCATTCTTCATTTATGGGTCAAAATAATGTCTAAACCCTAA
AATGACACATTTCAGGATAGCATTCAGGACTGATAATCAAATAAATTTAT
ATATCCTTTCTCAATACTCCAATCATATATTTCAAACCTTTTCTTGTTAA
CCAAAATGAAAGGAAATCTCATTTGTTGAAGTTGAATCCAGGTCACTCCT
ATATCATTGGGATGAAATAGTAGTTCTAGGATACACCTGTATTGATCGCA
ATGTGATGGTCACGGTTCGGCTGTTGTCCTGATGCAGATGAATATAAAGT
GTATTATATTTCTTCCGTTTAGATAAGAAAAAGGATCCTGATGCCCTTCA
AGAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCAGTACAAAATT
ATAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATTTAAGCATCTA
TTGGCAGACAATGAAAAACAGTTCAAAAAATATTTCGAAATAGTTACCAA
ACTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGATGAATATTTAA
CAGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGATTGATTCTGAA
GAATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTGAAGAAGAGTT
AAGAAAGCTTTTACAAGGTAATTTCATGTTCATCCATCAATCATATAATC
CCAAAAATCTTAATTTGATACTTTAGAACCTTTATAGTAACACTGACTGT
TACTGACCAGTAGTGTGGTAGCAGGGGGGAGCAACTCCCAAAAAAATTGC
TTTTTTACATCCTAAAATTAGCAGTTTTCAGCCAAAAAGATGAAAAAAAT
TATTTCGCTCGCGTGATTGTCACACAAATATTTTAATTTTTACTTTTAAT
ATGGGGCGCCAAAACAACAACTTTGGAAAATTGCTTCCCTAGTTTGCCTA
CTCTGAATCGCAGACCGAAGGTAGTATAGTTTATGCTCTCTAATTCGACG
TTCTACTATTCGATAGGCTCCCTTGTTCGATGAAATTTAAAGTCCTCGTC
AACAAGAAACTCTCATAAACGACGCTCCCTTATACGATAAGCTCCCTTGT
TCCATGAAAATCCGATTCCCCTTCAGGACAAATTCGTCAGTGGATACAAT
CAGTCTTATAGTTTGCCCCAATTTTGGTTGATCCACCACGCTACTGTAAG
CTCTTTTTCACCAAGCGCTCATTTTTTACTTTCTCCATTTTTAGTTGGAT
TATCGGAAACTTGTTCCAAACTGAACGAATTCGAAACGACATTTGACGTG
ACTTTCAGAGAACAACTGGAACTTCTTAATAGCAATTATGAAACACTACA
AAATAATGAACTATCGTCAGAAGACCTTGACCAGGCTTATTTTGACACGA
AATTATCGATTTTGAGCAAAAAGTTCGAAAAATTAACTCGAAATAATCAA
TATCATGCTGATTTTGTCGAGATTTTCAAACATAAATTTTGTTGA Coding sequence (CDS) from alignment at sc0000130_pilon:721272..726416- >XLOC_007482 ID=XLOC_007482|Name=XLOC_007482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3168bp|location=Sequence derived from alignment at sc0000130_pilon:721272..726416- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAGTGTAAAGGTGAATCGCATTGTCAATCTAAGTTATCAATTCATTAT
ATCAGCTATTAGGAACTTTTCGAGAATGAAGACTTTTGGATATGTTTCTT
TATGGATGATCCTTATTTTAGTTTATCTTTCAAATATTGTGAAATCTGAA
GATGTATCTAAATCACATAAGTGTAAAGGTGAATCGCATTGTCAATCTAA
GTTATCAATTCATTATATCAGCTATTAGGAACTTTTCGAGAATGAAGACT
TTTGGATATGTTTCTTTATGGATGATCCTTATTTTAGTTTATCTTTCAAA
TATTGTGAAATCTGAAGATGTATCTAAATCACTCATCCTTACATCTGTGC
AAAACAAGGAACAATCTGGGAAGACACCATCGATAACTTCTTCAACCAAG
TTCGACCATGTGATCGATCAAGTCATCCTTACATCTGTGCAAAACAAGGA
ACAATCTGGGAAGACACCATCGATAACTTCTTCAACCAAGTTCGACCATG
TGATCGATCAAGCATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAA
TTTAACCGTATACAAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGC
ATTACTTGAAAGTGAATTAAACAAAGTTGATGAAGAATTTAACCGTATAC
AAAAATTGATCACAATTTGGGAAAAGAACTTAAGAGTCTTATACAGCAAA
GAAGAACTCCAGGACATCCTAAAGCAAGACCTCACTACGATACAAACAGA
AACCAGCACATTGGAGCATGATCTTATTATTCTATCAGAAAAATCAATAT
CATTAAAAGACTTGATACCCAAAAATGCCAACAAAGCTATCAAGAAAAAG
ATTAAGCAACTCAAGAAGACCATTCAGAAAGAACTTCAGAAAGGCTTGGT
AAGACTGATTAACGATTTTGAATGCAAGTTGAAAGAGAGATGTTCTCAAG
ATAGTCTTAAAGAAGCAGAATCGTCGTTTTTCAGTAAAGTTAACGATATT
GGAGAAGTCCATGAGCAATGTGATGTCTTATACAGCAAAGAAGAACTCCA
GGACATCCTAAAGCAAGACCTCACTACGATACAAACAGAAACCAGCACAT
TGGAGCATGATCTTATTATTCTATCAGAAAAATCAATATCATTAAAAGAC
TTGATACCCAAAAATGCCAACAAAGCTATCAAGAAAAAGATTAAGCAACT
CAAGAAGACCATTCAGAAAGAACTTCAGAAAGGCTTGGTAAGACTGATTA
ACGATTTTGAATGCAAGTTGAAAGAGAGATGTTCTCAAGATAGTCTTAAA
GAAGCAGAATCGTCGTTTTTCAGTAAAGTTAACGATATTGGAGAAGTCCA
TGAGCAATGTGATGATTTCACTCAGGAGTGTGTGGACAGCTACAAGGAGA
TTTTAAACAAATTTGACGACTATACTAAAGACCATGTCAGCCCATTAAAA
ACCCAACTTCATGATCTCAAAAAATCAAAATGTAGTCAATCAAAAACAAT
TCGTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAGAAAGTACAAC
ATTGGATTGAGACCATTTTATCAAAACTCAAGGAATTGATTGAACAAAAG
CTGACACAGCTTAGTGATGGTTCTAAATACAATTTTGATGTTTTGAATGG
ACTGAGACTTGATTCGAAAGATTTCACTCAGGAGTGTGTGGACAGCTACA
AGGAGATTTTAAACAAATTTGACGACTATACTAAAGACCATGTCAGCCCA
TTAAAAACCCAACTTCATGATCTCAAAAAATCAAAATGTAGTCAATCAAA
AACAATTCGTAAAACTTTGGAAAGTCGTTTGAAATCTTTGGAAAAGAAAG
TACAACATTGGATTGAGACCATTTTATCAAAACTCAAGGAATTGATTGAA
CAAAAGCTGACACAGCTTAGTGATGGTTCTAAATACAATTTTGATGTTTT
GAATGGACTGAGACTTGATTCGAAAGATAAGAAAAAGGATCCTGATGCCC
TTCAAGAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCAGTACAA
AATTATAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATTTAAGCA
TCTATTGGCAGACAATGAAAAACAGTTCAAAAAATATTTCGAAATAGTTA
CCAAACTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGATGAATAT
TTAACAGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGATTGATTC
TGAAGAATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTGAAGAAG
AGTTAAGAAAGCTTTTACAAGATAAGAAAAAGGATCCTGATGCCCTTCAA
GAAATTAAAACCAAAATGGTCAATCTAAAGCAAACATCAGTACAAAATTA
TAACGAGTTCAACCAAGTCTATCAATACTTGTTCGAATTTAAGCATCTAT
TGGCAGACAATGAAAAACAGTTCAAAAAATATTTCGAAATAGTTACCAAA
CTTCGTTACGTGATCATTGGCTTCCAAGCACAGATCGATGAATATTTAAC
AGTTCTCTTGAGGAAAATTAAAATGGCATCATTTGAGATTGATTCTGAAG
AATTCGATAAAAAGTTGGAGGACTTCTTGTTGATGTTTGAAGAAGAGTTA
AGAAAGCTTTTACAAGTTGGATTATCGGAAACTTGTTCCAAACTGAACGA
ATTCGAAACGACATTTGACGTGACTTTCAGAGAACAACTGGAACTTCTTA
ATAGCAATTATGAAACACTACAAAATAATGAACTATCGTCAGAAGACCTT
GACCAGGCTTATTTTGACACGAAATTATCGATTTTGAGCAAAAAGTTCGA
AAAATTAACTCGAAATAATCAATATCATGCTGATTTTGTCGAGATTTTCA
AACATAAATTTTGTTGATTGGATTATCGGAAACTTGTTCCAAACTGAACG
AATTCGAAACGACATTTGACGTGACTTTCAGAGAACAACTGGAACTTCTT
AATAGCAATTATGAAACACTACAAAATAATGAACTATCGTCAGAAGACCT
TGACCAGGCTTATTTTGACACGAAATTATCGATTTTGAGCAAAAAGTTCG
AAAAATTAACTCGAAATAATCAATATCATGCTGATTTTGTCGAGATTTTC
AAACATAAATTTTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:721272..726416 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1336-1584:250 |
| Aaloc | 991-1332:1172 |
| Aaloc | 685-987:1842 |
| Aaloc | 346-681:2445 |
| Aaloc | 259-342:3755 |
| Aaloc | 169-255:4480 |
| Aaloc | 1-165:5146 |
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