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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:469096..472938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006050 ID=XLOC_006050|Name=XLOC_006050|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3843bp|location=Sequence derived from alignment at sc0000045_pilon:469096..472938+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACTTTTAGAATGAATttcgttttgattttgttggcaactttttt
catttcttcgcAGGGTATGGAAATGAAGAACTGCGGTAAGTATTTTCaca
accctgtgtcacagacacCCTGTAACCGCCCCAATGAAAAATTTCGACCA
CGTTGGAAAAATATCCTCCAATTTTAGCCCCTCTAGGAAGTCATTAGACc
ctgatttcatccccatttgaaaattAAGGGGATAAATTGCACTttaaaac
catccccattggatttttcgagtttagaaattttcatccccacccCATTA
TTAGTATAAGAAaaatttccaccggggctgtgataCAAGGGTGTCTTaac
ttttctttgatatttttcttacaaAGAGATATAGTTCTGGTTATCAGACG
ACTTCTAGCACCTTGCTTGACCCTTGCTTTCATTAAAATTTACCTCCGAA
TCTTGGGCTGTGAACtgcgaaaaatctttttctgcgAAATGTTTTTCCCT
TTACCCTAGTCATTCATGAGCTTTGTtcctaaatatttcttttttgacat
ttttaagctATGTTAGGAATATGTTACTGTATCTATAATTCCTTATTGAA
AATAtctatcaaatttttgtatttagACGCTAAAGCTCCAATCCAGTTTT
CAGTCACTCAATTCCCAAGTAAACTACCTCTCAAAAACAATGCAACTTTC
CACGTATCTGCTGgtattcaaatcaaaaattatgttcttccaaagaaaat
caaaattaaagttgaTGTCTCAAAACATATGTTGTTCTGGGTGAAATTAC
CTTGTATTGGGTGGTAAGTTTAAGTTCAAAAAGCTGTTtggggaattttg
aaattatttttcttatgcatatgcaattttttaataagcaactccaattt
tcgggtcagccCTGTGGTtacttagcattctagctcattttctaaaaaat
ttgccTTAACCACTCCTGATAtgataccatatttatgcttattgggtcaa
aGGATATCGTTTGCCATGTTCAGATCATctaaaaaagcttttactttacg
agtcatttgttcctggatttgaaaccattggattgcagtgtaactttgta
atgTCAGAAATTTCATCGTCGATGGAAATTTTTATGACATATTGTTTTGA
AGTCCCCCCTCTGAGAGAGGGAACACCATCAACCaacagggtattctctg
gcgtcaatcagtaacgtaaataaagcatGGGACACATGGGGACGCGAGGT
TGCCCTCGAACCTTAGCAGCCCGGCTGCTTATAAACGTGCTCCCCGAGAT
AAGAAAGAGTGGAAAGCATTTTAAAACAAAGGTCAGGTATTGATGTGGAC
TATGTTaaagtctaagacaaatcattatctaagaaataaacctaaagccg
aagaaaattcgcaaacgggctttttgccgaaaagagtttacagccggtag
agtCTTCTTCAAAACTCTGCGGTGGttttttttCCATATACCGCCGTAAC
GCCATATTTCCCCGTCTTTACTATCACTGCAACGggcgataacatcgtct
agtattgagggaacaaattttttacTGAAGTCAAAATTAGCGAAAGGCAC
ATGGTATTTCGAATCATCCAGGGAAGGGAACCAACTTTTTCCGGGTAAAT
GCCGTTTATTTTCCTTAATAAAATTGTGGAGTATAAATCTGAAAAGAAAG
GCATTTTGAGGTTAAAAGTACTGTTTATTAGCAAATTGAAATTGCGATaa
tttttgatcaatttcaattttgttaaatttggtgatttgagaaatttgaa
acaCTAAAATGACGACtagaatactaaaaagttgcGACTGTGGCACATaa
tattcttttgtttaataTGGCGGGAAAGTTACTTGGAAAATGgtcgattt
ttttatttgatttgctGAATCTTGTCAAATTTCTTAGCTAAAATTAGTCG
TCCATTAAaataactttgatttttttgcattaCTTTCAGCGATCAATTAC
TGTCCTGTGACAAGTTACCACAACTTTGTATGGTGAAAGACTTTTGCACT
GATTGCTCTTTGAACGTCAAAAATGTGAAGATTCAAATGCCAGCcgatat
tgaacaaaaaatacCAGGATTTCTTCCCAATTTTGCGATTGACGTaagta
aaacttttttacatattttttttatacgcaagtgtatgccccttggtcca
ggctcgtgtatgcttcaGTTCTCAAAGcaatttgattattagccctctag
agccatttgcgccctccgcttcgcgtcgggcccaaatgacactatcgggc
gaataatcaaactacgcgggcagaaaataacaacaacgacctcaaactga
acgctattgttatattatcaGCAATAGAGaaaaaaaGGCTGTGACTTTCA
TGTACTCTCGGTCTCGGGTACCTAACAGCCGTCCCCCgctaattattttt
tcgaaaattttccacccaggacattcttattccaatccccctcgcttatt
aattttttgaaaaatatttttgaaagttccctcttttgtcctaattctgc
tgtactacatagcctccttttcaaaagttttccacccaggaatTTTTATC
GCACAACCctcccccctgcttattaagttttgagttttttcCAACCGAAT
GCGAATTAAAtaggttttgtgctcgttaaaaagatagtTCCGAGTGGAAT
ATTATCGAAATAGAAAAACTTCTGAAAAGTCaataaatgaagatgaaaat
cagCGCTCagccaatcagaagcttcgcagattttcgaaaacaatagtaAC
ACTAtttttttacgatattcttttttttttggcttggaaaagcttaaagc
GCTCCATGTAGACCTTCGTTCTTTACAGAATTAAGCGTATTAAAAATTAC
TTGAGcctacaaaaaatgttttttcctgattttggctatttttggctttt
cagtatttccctaaatttttaaAGCACCCCTCAAGCATttctcagcctta
ttaagctttcgacctaagcatctctgagcctgttttcggatttttgtaag
cttataataaaaaaaatatgtattcgCTGAAATATGGTATACGAAACAAA
ATTTGTGGTCACTTAAAGCAAATGGACAAATGAACTTTAAGGTTGTCCTT
GGTTATACAACATAATGGCGAACTTGGTACTTATTTCTACAATTAATCAT
GGGGAGACCCTTGATAactaaattttattggttttcaaatgtcaaaaata
acaataatcaGTGCTATAACATACtggcaattttggctattttaccattt
ttcgaaaattgaagtccgagaaagaatgtcaatttcgcttcgggccttca
acttgatttcatcgattatttcgatctggaagGGATTTATTGGTTCGTTG
GTTTCTatggctatatttcaagccctactggaccattttttaacttttgg
atcctcaaattctaaggtcctaagtcttaaatctagcgttaaaactcaga
gttataactctacccttccaacctaatttagagcgcttccaaattgtgTA
GATATTGATAAATTGGATGagtagaaaaaaaatgaacctctttgcaaaat
ttcatcactaCACAATATTTTGTCCCGGTTTTGGCGGATTATGGCCTAAT
TCTGCCTGACTAATAGTCAAACGcctgattttgataaaaaacggtgtaaa
ttttatcaaaatattttaaattttatcaaaatattttctttttcttttag
ggTAAATACTGGTTGAAACTACGAGTTGTCAATGCTGATAATGAGAAAGA
AACGATCGCATGTGCTGAAATTATTACAAAATTAGACGcttaa Coding sequence (CDS) from alignment at sc0000045_pilon:469096..472938+ >XLOC_006050 ID=XLOC_006050|Name=XLOC_006050|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000045_pilon:469096..472938+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACTTTTAGAATGAATttcgttttgattttgttggcaactttttt
catttcttcgcAGGGTATGGAAATGAAGAACTGCGATGGTTACTTTTAGA
ATGAATttcgttttgattttgttggcaacttttttcatttcttcgcAGGG
TATGGAAATGAAGAACTGCGACGCTAAAGCTCCAATCCAGTTTTCAGTCA
CTCAATTCCCAAGTAAACTACCTCTCAAAAACAATGCAACTTTCCACGTA
TCTGCTGgtattcaaatcaaaaattatgttcttccaaagaaaatcaaaat
taaagttgaTGTCTCAAAACATATGTTGTTCTGGGTGAAATTACCTTGTA
TTGGGTGACGCTAAAGCTCCAATCCAGTTTTCAGTCACTCAATTCCCAAG
TAAACTACCTCTCAAAAACAATGCAACTTTCCACGTATCTGCTGgtattc
aaatcaaaaattatgttcttccaaagaaaatcaaaattaaagttgaTGTC
TCAAAACATATGTTGTTCTGGGTGAAATTACCTTGTATTGGGTGCGATCA
ATTACTGTCCTGTGACAAGTTACCACAACTTTGTATGGTGAAAGACTTTT
GCACTGATTGCTCTTTGAACGTCAAAAATGTGAAGATTCAAATGCCAGCc
gatattgaacaaaaaatacCAGGATTTCTTCCCAATTTTGCGATTGACCG
ATCAATTACTGTCCTGTGACAAGTTACCACAACTTTGTATGGTGAAAGAC
TTTTGCACTGATTGCTCTTTGAACGTCAAAAATGTGAAGATTCAAATGCC
AGCcgatattgaacaaaaaatacCAGGATTTCTTCCCAATTTTGCGATTG
ACggTAAATACTGGTTGAAACTACGAGTTGTCAATGCTGATAATGAGAAA
GAAACGATCGCATGTGCTGAAATTATTACAAAATTAGACGcttaaggTAA
ATACTGGTTGAAACTACGAGTTGTCAATGCTGATAATGAGAAAGAAACGA
TCGCATGTGCTGAAATTATTACAAAATTAGACGcttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:469096..472938 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 427-519:3751 |
| Aaloc | 274-426:1991 |
| Aaloc | 88-270:629 |
| Aaloc | 1-84:1 |
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