XLOC_005224 (mRNA) -

Overview
NameXLOC_005224
Unique NameXLOC_005224
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1094986..1096026-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005224 ID=XLOC_005224|Name=XLOC_005224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1041bp|location=Sequence derived from alignment at sc0000098_pilon:1094986..1096026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAATTTAATTATTGTTGAAAACATATTGGATCTTGTTCAAAATCC TACCCTTAAGATCAAAGATATACCAAACATTTTAACCAACTATCTTCGCT CTTTGAATTTTGGTTTGATTGACATTCGAATGGATAGATATTTGGGAACA GATAATACTGAAGATATGTTTTATTCGAATGGTGTTTTCAAGGAAGACAT TGAATTACTTTGTACAGTCGAATGTAGTGATGACCAGTGCCTAAGGAAAC ATTTGTTCGAAGTAAATGGTTTAAAAACTTTGGTTATCAAATCACTTACG AGAGTTCTCGAGATTGATTCAAAGTTTGCTTCCCTTGAAGGTGTTAAAAA TCATATTAGACAAGAATGGAACATTCCCAGTCATGGTCAAATATACATGC ATGGAAACAGGGAGATAACCAAGGATGAACTTCTCATTGATGTTTTCAAT CATTTTTCAAGTGAAGAAGAGAGATCAAAGAAATGTTTGTACCTTAATCT AATCATTCTTGAACCCAAAGATATCACCGTGTCCTTGAAATGCCCTTATG GAGAACGAATAGGGTTACCGGGTACTATCACAGTTAAAGAAACCTTAACT ATTGGAGATCTAGAGGAAACGTTATCAAATATGACAGGGTGCAGTATTTC ATTGTACCAACAAGAACAGGGTTGGTTCTCAATGCACAAAGACCAACGGC GCCTATTCGAATTTTCGCCCAGTTTTATTGCTCACAGGACCATAAAACTC CGCATTTTGGTAGAATGTGTTAAATGTAAGAAACCTGACATAATCGATGA ACAGTCAATTATTTCGAATCATGAAACGGTACACGAAGCCATGGCTCGAA TCACTAACCAAAATGGAACGATCCAATGCATTTGTGGTTTTGATATGCCT GTCAAAATGAAATTGTCTAGTAAAAACTCTGAAATAAAAGAACGGACTGT TTTATTAGATACACCCTCTGACTATGTTTTGATTGTGCAAGCACAACCTA CTCTAATCACGCGATTGAGAGGTGCTGTTGGCTTGAATTAA

Coding sequence (CDS) from alignment at sc0000098_pilon:1094986..1096026-

>XLOC_005224 ID=XLOC_005224|Name=XLOC_005224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2082bp|location=Sequence derived from alignment at sc0000098_pilon:1094986..1096026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAATTTAATTATTGTTGAAAACATATTGGATCTTGTTCAAAATCC
TACCCTTAAGATCAAAGATATACCAAACATTTTAACCAACTATCTTCGCT
CTTTGAATTTTGGTTTGATTGACATTCGAATGGATAGATATTTGGGAACA
GATAATACTGAAGATATGTTTTATTCGAATGGTGTTTTCAAGGAAGACAT
TGAATTACTTTGTACAGTCGAATGTAGTGATGACCAGTGCCTAAGGAAAC
ATTTGTTCGAAGTAAATGGTTTAAAAACTTTGGTTATCAAATCACTTACG
AGAGTTCTCGAGATTGATTCAAAGTTTGCTTCCCTTGAAGGTGTTAAAAA
TCATATTAGACAAGAATGGAACATTCCCAGTCATGGTCAAATATACATGC
ATGGAAACAGGGAGATAACCAAGGATGAACTTCTCATTGATGTTTTCAAT
CATTTTTCAAGTGAAGAAGAGAGATCAAAGAAATGTTTGTACCTTAATCT
AATCATTCTTGAACCCAAAGATATCACCGTGTCCTTGAAATGCCCTTATG
GAGAACGAATAGGGTTACCGGGTACTATCACAGTTAAAGAAACCTTAACT
ATTGGAGATCTAGAGGAAACGTTATCAAATATGACAGGGTGCAGTATTTC
ATTGTACCAACAAGAACAGGGTTGGTTCTCAATGCACAAAGACCAACGGC
GCCTATTCGAATTTTCGCCCAGTTTTATTGCTCACAGGACCATAAAACTC
CGCATTTTGGTAGAATGTGTTAAATGTAAGAAACCTGACATAATCGATGA
ACAGTCAATTATTTCGAATCATGAAACGGTACACGAAGCCATGGCTCGAA
TCACTAACCAAAATGGAACGATCCAATGCATTTGTGGTTTTGATATGCCT
GTCAAAATGAAATTGTCTAGTAAAAACTCTGAAATAAAAGAACGGACTGT
TTTATTAGATACACCCTCTGACTATGTTTTGATTGTGCAAGCACAACCTA
CTCTAATCACGCGATTGAGAGGTGCTGTTGGCTTGAATTAAATGACAAAT
TTAATTATTGTTGAAAACATATTGGATCTTGTTCAAAATCCTACCCTTAA
GATCAAAGATATACCAAACATTTTAACCAACTATCTTCGCTCTTTGAATT
TTGGTTTGATTGACATTCGAATGGATAGATATTTGGGAACAGATAATACT
GAAGATATGTTTTATTCGAATGGTGTTTTCAAGGAAGACATTGAATTACT
TTGTACAGTCGAATGTAGTGATGACCAGTGCCTAAGGAAACATTTGTTCG
AAGTAAATGGTTTAAAAACTTTGGTTATCAAATCACTTACGAGAGTTCTC
GAGATTGATTCAAAGTTTGCTTCCCTTGAAGGTGTTAAAAATCATATTAG
ACAAGAATGGAACATTCCCAGTCATGGTCAAATATACATGCATGGAAACA
GGGAGATAACCAAGGATGAACTTCTCATTGATGTTTTCAATCATTTTTCA
AGTGAAGAAGAGAGATCAAAGAAATGTTTGTACCTTAATCTAATCATTCT
TGAACCCAAAGATATCACCGTGTCCTTGAAATGCCCTTATGGAGAACGAA
TAGGGTTACCGGGTACTATCACAGTTAAAGAAACCTTAACTATTGGAGAT
CTAGAGGAAACGTTATCAAATATGACAGGGTGCAGTATTTCATTGTACCA
ACAAGAACAGGGTTGGTTCTCAATGCACAAAGACCAACGGCGCCTATTCG
AATTTTCGCCCAGTTTTATTGCTCACAGGACCATAAAACTCCGCATTTTG
GTAGAATGTGTTAAATGTAAGAAACCTGACATAATCGATGAACAGTCAAT
TATTTCGAATCATGAAACGGTACACGAAGCCATGGCTCGAATCACTAACC
AAAATGGAACGATCCAATGCATTTGTGGTTTTGATATGCCTGTCAAAATG
AAATTGTCTAGTAAAAACTCTGAAATAAAAGAACGGACTGTTTTATTAGA
TACACCCTCTGACTATGTTTTGATTGTGCAAGCACAACCTACTCTAATCA
CGCGATTGAGAGGTGCTGTTGGCTTGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005224XLOC_005224-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1094986..1096026 -
Properties
Property NameValue
Aaloc1-1041:1042