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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:1058136..1060519+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005172 ID=XLOC_005172|Name=XLOC_005172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2384bp|location=Sequence derived from alignment at sc0000098_pilon:1058136..1060519+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGCTTGGGTCAAACTTTTCGCTCTTGCTTTCATTGCATTAGCAGCTGT
AAGTAATTTATTAAAAGATTATCAAAAAGCTAATATTTTTCGGTATTTCC
TCCATCCAAAATGGAAGGTTAAATATTTTATCTGCCAATCAAAAGTCTTC
ACTGCTGTTTAGAACCATACCCAAACCCTGCAAAAGAACATCTACTTGTA
GAAGAACcatttaaggggggggggtcaattcCGAGACTCTGCCAAGTTCT
GTCACATCCACTCACTTTGGTTGAAATCCTTGTTTCGGGGCAAGATGCGT
TCTAGAGCTCAACATAATATAGGacctataaatttaaatttggcggaaag
TAGTTGTAAGCGACTTTGGCGAAATCTTTTGataattcgccaaattcgcc
aaaatttcttcccttaaggtatctctGCACAAAAATATTAGatatcactt
tttttttgcaggCAAGTGATTATCATTTGGAGTTCAATGAAAAACAACAG
AAATATGACGAACGAGTTCACATTGACAAACAAAATGGTATCCTCATCTA
CAGAGTGCCAAAACACGCTGGAGTGGTTGCTGCTCACTATTTGAAAGATT
TCAATAaggtattttctttttgaattataGAGAAAGTCTCTAATTTGGGG
ACAAGGAGAGATATTTTCTGATCGGTAAGGTCCTGATGAGAAAAGGCACA
TGCAGATCTATAAAAGGTcagattttgaaagattttgtttttatttaaaa
tgaaGTTTAACAAAGAActaaatttttctttccaaaaaccaGTATGTCAT
AATATGGAACCTTAAAGtatgtctcaaaagtatgtgagCAGTCTTTTTAC
CTTTTCTAAGCACCCATTTATGCTATGTTCGAAACTTAtaaaccgttgga
aagatatttctaaGGAGAATAATTCAAgggtaaaagatttttgaaaaatt
tgaaaattattaagaatgatttggaaatatctttccaacggtgtataact
ttctaaCAAAGCATTGCtgagaaaatgctaaaaaactaaagtgtccacat
acttttgagacagactttagttgtAAGTAGTAGGTTTTTTCTGAAATGTG
TGAACGATCTCTTTTATTATCTGACACTTTGATTACCCAGCGGTATACTC
TTTATACTTTTTGTTGTAGCAAATGACAGTCTTGAAGGTTTTCACAGAGA
AAAGATGCTACATTTCAAAGATGGGAAAAGATGAACCATCAATCGATGAC
ATTGAATTGGGAATGCAAAAAGTGAGTATAGAACGGGTATAAAACTAAAT
GAAACTATATGAGCACTTCCAGAAAAATATTGtctgaaaatagaatatca
cTTTATCGTTTAAGGATAAATTTACAGCGAAAAGCTGCTTTCGATttaaa
ttttcaaccttttcaCCGCGAAATCACCCAAAAATCTAAGAGATCATAAC
AGCATTTTTCATCCTGTTCGGAGTataacatccccttctcacagacccgg
tgggaaccTCTCCCACTGGAATAATTAGCCAAAAAGTCTTCCCCAATGGA
AATCTATGCCAGCTATAAAAAACATGGGAGTATCAACCCCCATCGGTTAC
TTTcaccccactggctgaaaaaatcttaccggGCTTGTAAGAAGACGGTT
TTAGGAACCTTGATAtctattttttaaaaacatcgaGTGAAAATCCGTTT
ATTCCTTTTCCACTAACAGGCCAATGGAGTTTTTGATTCCAAGAAATATT
GGATTGAAACTGAAGACGTCATCACCCTTGGTCACGCAAACAAATTAAGC
CTTtcgtccgccattttgaatttctgtGGAAGTTTTGACATCTTGGACAC
TGTGAAAAACAACCAACAAACACGGGAAGCACTCAAAATGAAAGCCGTTG
GTGAGTTGATTGGCTTTTGAGGGGTCTGGTAATGAATATACaagaaaatg
acgtcaaaatactttattttaagaaaatgtcaatgcaatgacttcttagA
TTTGAGTGGTTTTGGAACATGGTTTTAGATTTCTCGAAATTACCCTCTTC
TCGAAGACAATCTTTACGCTTTAGCCTGACTAGTTTTGAACTTTTCAACT
TATTTAGCACGTCTAATTTTCTTCCAGCCCAATACAAAAGTGGAAAAAGC
AAACGATTACTCGTCGAAGATTACGTCTACTGCAAAAACGATCAATCAAA
AATGAGCGCTGAAATGGCcaaatgtaataaaaaattcGATCAACTTGAAT
TCAACTGCAGATTCGTCAGACTTGGCACTTGCATTTACACAGTCAAATGT
CTCTTGACACAACAAGGATACAATTGCCCTGGTACACATCAATACACTCA
TTTGAACTGCTGTACAATCAGATGTAAAGCttag Coding sequence (CDS) from alignment at sc0000098_pilon:1058136..1060519+ >XLOC_005172 ID=XLOC_005172|Name=XLOC_005172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000098_pilon:1058136..1060519+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGCTTGGGTCAAACTTTTCGCTCTTGCTTTCATTGCATTAGCAGCTCA
GGCTTGGGTCAAACTTTTCGCTCTTGCTTTCATTGCATTAGCAGCTgCAA
GTGATTATCATTTGGAGTTCAATGAAAAACAACAGAAATATGACGAACGA
GTTCACATTGACAAACAAAATGGTATCCTCATCTACAGAGTGCCAAAACA
CGCTGGAGTGGTTGCTGCTCACTATTTGAAAGATTTCAATAaggCAAGTG
ATTATCATTTGGAGTTCAATGAAAAACAACAGAAATATGACGAACGAGTT
CACATTGACAAACAAAATGGTATCCTCATCTACAGAGTGCCAAAACACGC
TGGAGTGGTTGCTGCTCACTATTTGAAAGATTTCAATAagCAAATGACAG
TCTTGAAGGTTTTCACAGAGAAAAGATGCTACATTTCAAAGATGGGAAAA
GATGAACCATCAATCGATGACATTGAATTGGGAATGCAAAAACAAATGAC
AGTCTTGAAGGTTTTCACAGAGAAAAGATGCTACATTTCAAAGATGGGAA
AAGATGAACCATCAATCGATGACATTGAATTGGGAATGCAAAAAGCCAAT
GGAGTTTTTGATTCCAAGAAATATTGGATTGAAACTGAAGACGTCATCAC
CCTTGGTCACGCAAACAAATTAAGCCTTtcgtccgccattttgaatttct
gtGGAAGTTTTGACATCTTGGACACTGTGAAAAACAACCAACAAACACGG
GAAGCACTCAAAATGAAAGCCGTTGGCCAATGGAGTTTTTGATTCCAAGA
AATATTGGATTGAAACTGAAGACGTCATCACCCTTGGTCACGCAAACAAA
TTAAGCCTTtcgtccgccattttgaatttctgtGGAAGTTTTGACATCTT
GGACACTGTGAAAAACAACCAACAAACACGGGAAGCACTCAAAATGAAAG
CCGTTGCCCAATACAAAAGTGGAAAAAGCAAACGATTACTCGTCGAAGAT
TACGTCTACTGCAAAAACGATCAATCAAAAATGAGCGCTGAAATGGCcaa
atgtaataaaaaattcGATCAACTTGAATTCAACTGCAGATTCGTCAGAC
TTGGCACTTGCATTTACACAGTCAAATGTCTCTTGACACAACAAGGATAC
AATTGCCCTGGTACACATCAATACACTCATTTGAACTGCTGTACAATCAG
ATGTAAAGCttagCCCAATACAAAAGTGGAAAAAGCAAACGATTACTCGT
CGAAGATTACGTCTACTGCAAAAACGATCAATCAAAAATGAGCGCTGAAA
TGGCcaaatgtaataaaaaattcGATCAACTTGAATTCAACTGCAGATTC
GTCAGACTTGGCACTTGCATTTACACAGTCAAATGTCTCTTGACACAACA
AGGATACAATTGCCCTGGTACACATCAATACACTCATTTGAACTGCTGTA
CAATCAGATGTAAAGCttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:1058136..1060519 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-735:2130 |
| Aaloc | 298-477:1720 |
| Aaloc | 196-297:1170 |
| Aaloc | 49-195:462 |
| Aaloc | 1-48:1 |
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