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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000245_pilon:285251..289261+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005128 ID=XLOC_005128|Name=XLOC_005128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4011bp|location=Sequence derived from alignment at sc0000245_pilon:285251..289261+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtgGAAGATCGTAGCTGTGTTTTGTTTGTACGTCCAAATGACGTACGG
CGCCGTCAATGAACTGACGGATAACGATTTCTACAGTTACGCAGCAAAGA
AGCAAGTTTTATTGGTCAACTTTTATGCACCATGGTAAGTTACAGTTTAA
ATAGCAATAcatacattttgaaaattacgaaaaaaattttgtgcATCAAA
TATAGGGTGAGCGCTaccagaatcataaaaaagagacaacagggactggg
ttcgagttgtACTATTACGACGGTGTCATCGATTTTCACCATCTCCTCTC
AATTACTATAGGTGCAGTGACTGTGCAAATTTGAATCCACATTTTGAGGG
CGCAGCGACCACCCTTGGACCACGCGGTGCTGACTTGGCCAAAGTAAGTG
CTTGGTTTTTAGACTGTAATTCTTCTATTCATGATTTTTACTCCCCACAT
GGTAGTGATCTGTGAGATAGGAGTGTAATACTAGGCatataaattttctt
ataatCGTGTATAAATTTATTACTGTATAATCTTATAATGACCGAGTCCA
ATTTTATGCTTCtttttttGTCAGTTTGTTGCATtctattaaagtctatt
cacgataagtgtgcactcttttttcttttacctataacttttgaaggaat
tcttcaatctttataaatttggtatcattggaaagatattagtgagtgaa
gcaatttgaaataaaaaaatttttaaaaagattttaaaaacgaagatgaa
aatgaagaagaaaaaaatgaagatcttgtagaaaagtgctataactttca
ttttcactggagagattctttgattttaggaggtcatcactgtgaaaaaa
tttcattaaaatatttattcaatgtaaagttatgatacaaagttcataag
tgattgaccccaaaaaacagcagaaaacagcagaaaacagcgtttttaga
cgtcaaccagcttataactttgtttgatatcttttgactgaatggttatt
tttgagaatttttttcacagtaatgacgttcgatgatcaaggatttactt
cactgaaaatgaaagttatagcacttttctacaagatcttcatttttttc
ttcttcattttcatcttcgtttttaaaatctttttaaaaatttttttatt
tcaaattgcttcactcactaatatctttccaatgataccaaatttataaa
gattgaagaattccttcaaaagttataggtaaaagaaaaaagagtgcaca
cttatcgtgaatagactttagcttgttattttttttgcaacCATAATGAA
CAAGGTTCTAGTCTTTCCCGTTTTTAACGATCATTCGGAAAACTAACACT
ATTTGTGGATGTCTCTACTCTTGAATCTCTTTCCAACGACAGCTAAATAT
AACGGCCTTGATTCTACGTAGCCCAATAAATGAATTTGAGCTTTTTGtta
aatagtgaaaaatcattCGAAATCGTTAGGAAAGATTCatttaggcgaaa
ataaaaaatggtcgGCCGgtcgcagactatgggttcatatATATGGTTCA
GTTCAGCATAAAGAAAATTAAGTTGGctgttcaagctatcaaacgttgTT
TGGTTAGATTCccacttgtaaatcaagttttgttcgttagtagttaaTAC
ATTAGTATTTTTTCCgaccggccgcatgagagctttgtTCCTTAACctgc
attccggaaacactacattttttttattttcgccttgcCAAATCTTCAAC
AGAATTAAGTTTGTTGATAGATCTACTCTTGACTCTCTTTCCAACAACAG
CATAGAATGCAACCCCCCTGGctcttaggggggggggctagagcCTAAAG
TTTTGGTTGggggctctttttccctaagatcaggggggggctacttactc
agggggggctatttgtttaggtctgttgactgggggctaacctaacaact
ttttccaagaactaagaaatttttcttacttcttatttttgataccctta
cagtgcactttttcaaaattttccaagaaaatgtggaatttttcctctaa
aattgaccaattttgtgccaattttaccaaaaaatcggccttttatcaca
atttcctacccttacagtgcagttcagtgcagttttgtaatttcctaccc
ttacagtgcactagctgaactatgaaaaacctacccttaagggccgaact
tCTGGTAGGCATTTaaaccttgagtgcccccccccccgggtgtaaTAATG
AAGTCGTACTATTGACGTTTGTTGATTAGAATTTCAAAGAAGACATTATA
CATTTGGTATCTCTTTCTCTTGTGTGGACATGCAAAATAAAGACCttgca
ttgtttgaaattttttccattctaacatttttgttttttgtgtattttgg
tAAGGGGGCTgtctatttcgaattttggtgggggctaaatctctgggggg
gggctgaaccttcagggggggggCTTCAACCCCTCTGCACTCTATGAACA
GCTATACATATTATTTTTTGTAGGTAGATTGCTTCGGAGCTggtaaaggg
atgtgtgaaatgTATTCCGTTAAAAGTTGGCCACAACTGAAATCTTTTCA
CTTTGGAACGTACAATGGTGACTATACCGGACCACAAACCACAGGTGAGT
AATCAGTAATACTAATAGATACGTGTGTAGAATGTTATTTCTTCTCCACT
TCAACACTGGTGCTATTTAACAACAAAGAGTAATTAGAACTCAAAActct
ttttcaagaaaatcttccctttgaaatgaaaacaaacctcagtctgtaga
aaatttaattaaaaaataggGGTTTGATTGAAAGAAATAGTCTGATTGCC
ATAATAGTACCAACGAGATCGTGTATATTTCCATGTAATTATTCtcattt
tgaattaaacatATTTGACTTCTAGATGGGATTGCAAACTATATTAACAC
TGTTGAAAACAGCGCTGCACCGCAAGTAGCACCAGAACAGCCTGCGGGTA
ACCCATACGCCGGACACTTACCAGGTGCCGCACAACCGGCAGCCGGGCTC
AACAAACAACCTGTTGCAACATCCCTGTCATGTGCCAAATGCaaaatcga
aaaaccaaaaggaaaaaTTAGTAAGTTGAGTTTTACGCCTGTCTTATGGT
AAAACGTTTAAGTTACGCATCGGTTTGGTATAGatttagactggcacgcc
aaTCGGGCTGGAACAGTGAACGCAGGATTTTAGGATTTAGGttagcctat
ctctatcccaacatGCGGTTTTTTATCACTCTCGTTTTGAGCTTTATTCA
CAAAAACACTCCTTCGCGGTGACAAATTTTATTGATAGAGTTTTTGCTGC
AGTCAAAAGCTACGGTCCTTTGGTTTAAGCCGAGAATTTTTATTCCCCCA
AGGATCTCTGGGGGAATAAATATAAAAAGTTACAGACGAAACGGCGTCGA
GAAAAAAGTCGTGGTCGTTTGGTACAACAGGCAAGATTTAGGTAAGCTta
ggaaaaaaatttgtcagatcATCAACTTCTGCTTGCTGTCCTATGCAAct
cctattttagcaaacaTCCGCCGCCCTTCTGCTCCCGCCCTTATTAATTA
CCaaactagtttgctagtctagtaTGAGGGGATTTATCTAAAGGATCCTG
CATttgctaaaaatagacaaaaagaatgacaaatttcataaaaaacgaca
aatgtTTCAATCTACAACACCCCGACCGATTGTGACTGTAGCACCCCTac
gtattcattcctctttgattATCACGGGAAtaaactacatgtggtttaaa
gaacgacaaattacgcatgcatGTTACaatgtaggattctttagaggaac
agactgtatAGATTTTGCTACAGAAATAATTTTATGAatccttcttcttt
tttatagatAAAGGATGTACGTCAGCTTTGAAGAAACAGTGTATCACAAG
CAGTAAGGATAAAAAATCTTTATCCAAAGCACAAATGCAATATGGTGAAG
ATGACAAATAA Coding sequence (CDS) from alignment at sc0000245_pilon:285251..289261+ >XLOC_005128 ID=XLOC_005128|Name=XLOC_005128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000245_pilon:285251..289261+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtgGAAGATCGTAGCTGTGTTTTGTTTGTACGTCCAAATGACGTACGG
CGCCGTCAATGAACTGACGGATAACGATTTCTACAGTTACGCAGCAAAGA
AGCAAGTTTTATTGGTCAACTTTTATGCACCATGatgtgGAAGATCGTAG
CTGTGTTTTGTTTGTACGTCCAAATGACGTACGGCGCCGTCAATGAACTG
ACGGATAACGATTTCTACAGTTACGCAGCAAAGAAGCAAGTTTTATTGGT
CAACTTTTATGCACCATGGTGCAGTGACTGTGCAAATTTGAATCCACATT
TTGAGGGCGCAGCGACCACCCTTGGACCACGCGGTGCTGACTTGGCCAAA
GTGCAGTGACTGTGCAAATTTGAATCCACATTTTGAGGGCGCAGCGACCA
CCCTTGGACCACGCGGTGCTGACTTGGCCAAAGTAGATTGCTTCGGAGCT
ggtaaagggatgtgtgaaatgTATTCCGTTAAAAGTTGGCCACAACTGAA
ATCTTTTCACTTTGGAACGTACAATGGTGACTATACCGGACCACAAACCA
CAGGTAGATTGCTTCGGAGCTggtaaagggatgtgtgaaatgTATTCCGT
TAAAAGTTGGCCACAACTGAAATCTTTTCACTTTGGAACGTACAATGGTG
ACTATACCGGACCACAAACCACAGATGGGATTGCAAACTATATTAACACT
GTTGAAAACAGCGCTGCACCGCAAGTAGCACCAGAACAGCCTGCGGGTAA
CCCATACGCCGGACACTTACCAGGTGCCGCACAACCGGCAGCCGGGCTCA
ACAAACAACCTGTTGCAACATCCCTGTCATGTGCCAAATGCaaaatcgaa
aaaccaaaaggaaaaaTTAATGGGATTGCAAACTATATTAACACTGTTGA
AAACAGCGCTGCACCGCAAGTAGCACCAGAACAGCCTGCGGGTAACCCAT
ACGCCGGACACTTACCAGGTGCCGCACAACCGGCAGCCGGGCTCAACAAA
CAACCTGTTGCAACATCCCTGTCATGTGCCAAATGCaaaatcgaaaaacc
aaaaggaaaaaTTAatAAAGGATGTACGTCAGCTTTGAAGAAACAGTGTA
TCACAAGCAGTAAGGATAAAAAATCTTTATCCAAAGCACAAATGCAATAT
GGTGAAGATGACAAATAAatAAAGGATGTACGTCAGCTTTGAAGAAACAG
TGTATCACAAGCAGTAAGGATAAAAAATCTTTATCCAAAGCACAAATGCA
ATATGGTGAAGATGACAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000245_pilon | genome | sc0000245_pilon:285251..289261 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-636:3910 |
| Aaloc | 340-531:2928 |
| Aaloc | 217-336:2524 |
| Aaloc | 136-216:313 |
| Aaloc | 1-132:1 |
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