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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:1567476..1574830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004970 ID=XLOC_004970|Name=XLOC_004970|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7355bp|location=Sequence derived from alignment at sc0000045_pilon:1567476..1574830+ (Clytia hemisphaerica_ch_hm2_pilon)
gatACTGGTCTTGGATTATGTGGCTGGGTGTTGACCATTTTCTCCCTTCT
CATGTTCATTTGTACATTCCCTCTCTCACtttttttCACACTCAAGGTAA
GTCACTTTCTCTATAtgaaattctgaaatatttggTCATTCAAAGGAAAC
TGTTGGCTACAATTTCATATACTTATTTACTCTTTCCTCGGAGAATTTTA
TTACCGAGTGGAGTACAATATGGTGTCATCGTCACAAACTAGATGGGGGT
TCCCGGTTTGAATTCCCGCACTTTCTCATGCCCTTTCACTTtcagccggc
tggccgtggggCTTTGTATATCTTTAACATGAAGCTAACAAGTTTCCTAT
GAATAAAGAGACAAGTTGTCATTAACTTGGGAGAAAAATAATATGTGGAT
TCAATTAGACAGGCACGATTGAATCGGCAAAAGATTTTAAGCGATATCTt
agccattttagttttttttgaaagaatcttGGAATACTAGTAATACCAAC
TCCATTGTTCTTATGATTGTTAGAAATCTTTATCTTCGTCCttttttttA
CATACAAAATGCAATATGTTTGTGTATTTTGGTATTTCTTCATGTGTATT
TTTCATAGATTGTTCAAGAATACGAGCGAGCTGTAATCTTCAGAGTGGGT
CGTCTCGTCAAAGGAGGAGCTCGTGGAcctggtatttttttcattctacC
ATGCATTGATAACTACCTTAAAGTCGATTTACGTGTTGTCTCATTTGATG
TCCCTCCACAAGAAATTTTAACCAGAGACAGTGTCACCATTACTGTAGAT
GCCGTCGCTTATTTCAGAATCTCAAATCCTATCTCGTCTGTCTGTAATAT
CGAGGATGCTCAAAGATCCACAAAACTGTTAGCTGCAACTACTCTGAGAA
ACGAGTTGGGTACGAAAAATCTCAGTGAAGTTCTTTTGGAGAGGGATACA
ATAAGCCATTCAATCCAACAAATTTTGGATGCAGCTACAGATCCATGGGG
AGTGAAAGTTGAACGTGTTGAGATTAAAGATGTCCGCCTTCCACAAATGT
TACAAAGAGCTATGGCTGCTGAAGCTGAAGCCTCCAGAGAAGCCAAAGCT
AAggtatcaaaaatatatatagatATATTACATATTGGTATTAAACTTTA
CAGACTCCTAGTTAGTTTTGAGGACCATAGCTACAAGAAGCAAGGAGGTT
GTAAATGTAAAGCCCTTTCCGGATGATAACCAAAGCCAAAGCAACATTTT
ACttctcaagatttcaaaaaactctttgTGTCTCTTGTTTATGCTTTTTT
AACTTTCAATAATAAACATATCGATTATTACTGTATATAtagaaagattt
tttaagaataactttttctTGAGATATCTGATACCTCGATTTGCTGATTC
TTCTTCCTTCTATTACGAGGGAAACTAGCTAGACGCAGAAGCTTTACTAC
ATAGGAGACAGTATAACTCTCACGTTTATCGCTTCGTAGTACACTCTGTG
CACATAATCTGTTTGATAAAAAAATTCCCGTACGGTAACCTATGCGATAA
AGTATGATTTATAAATAGCAAAACTGCCCTTTTTCCCCCAGCACTCCATC
GCAGTGGTCGGTTTGAAAAATCCCAAATGAGAAAAGACAATGATAACAGA
CCCTCTACGGCAATGAATTTTGATATTAGCCGTAGATACTGGGTCCTGTG
TACAGACGGCAGTATAACTTGAACCTCAGCTCGAACAATCTGCGTTCACC
GTGACTCTATTTCTACTACCTTATCGGGGAAATTTTCGTCGGGGAAAATT
TTCGTCGGGAAAAAATATTCGTCACTTGCTGGTAGTTGGTAAACGCATTA
AGGCCGGGGAAAATTTTCGTCTGGGAAAAATATTCGTCACTTGGCCAATA
TTTCGTCATTTTTCCCCGACGAAGTTTTCCCCGATAAGGTATTCTATCAC
TACTCTTTCTTTCTTAGGTGATTGCTGCTGAAGGAGAGATGAATGCTGCT
CGTGCTTTGAAAGAAGCTTCTGACGTCATTTCCGAATCACCACAAGCTTT
ACAACTCCGTTATTTGCAAACCTTACAAACCATTTCAGCTGAAAAGAATT
CCACCATCATTTTCCCGTTACCCATTGACATGTTATCGAAAGCACTTAGC
AAATGAGAAGTGTACGAAGTGTTGTAGGCGCTCCTGGAAAAGACATGCAA
TTTAATTGTGATGTAGGGGTGAGAGTCATTGAGTTTCACTAGCATGGAAG
TTTGTTACCTTGTATGAAAATTCACAACGCATGCGCGCAAGTGATTTTAT
GCATCGGAGTTCCTCTtatttttaaaaccaaaaccTTCtttttttGTGTA
TTTCCTAGTTTCATATTCAGGAATTAATTTAAagcttttcttttaaaaaa
agtgaagaaggaatTTCTTCGGAtatgaattttgattttcttttcgatta
ttaacatcttttttttcatttatatcttattcaatgaaaaaattaattta
cgtCCCGTTGAGAGATTTCAAGGTTATGAATTCAATATCGAATATTTTTT
CATCGGGACAAGTATGCATGGGAAACATTTGCTTAAATTAAcagtttttt
taactcgtgaaatattattttggtcactttaaattttggttgtcttttat
ttttgtaaatatcatTTGGTACTGTTTAGTAGTAACTTTCGTTGCTTCAT
CATGCACTCGGGAAGATTGtttttttCCTGGCTAATCGATGAAAATAACA
TTAGAATCTTTAGTGATTTTTTACTCGCTTTCCCTATTCCCTTACAGTTT
TTTATAGTAATTTATTAATTGATATTACTGAAAAATTTATTACtaatcat
tttgttttgttactTTGTAGCTAAAAATTATACATAAATTGATCACACTT
ATTGTACgataaataaatttaattaGGATACCGTTGTGTGTTCTCTATGA
CTTGATATTCTCGCGGTTGCTTATTTAACTAGTTTTCTAAGCGTTGATTG
ACAACTTGTTAATAACTTGTTATAATCTCACAATTTTTATtcgtttttat
attttacagagaacaaagaaacaaaaaaaaacgaacgaaaaaaCATTGGG
AAATAGATGCAACAGTTTGATGTCTGGCCTTacttaattttgatgtttca
tgACTGGTTGAATTTATTACTTTGGTGAAAAAGAATCCATTACTGGTGAT
GCTTGATTGAAATTCCAATTGGATGTATACCCTCCACGGACACCTGTTTT
ACCTCTGGAAAAGCGCCATCAAATCACTTATCACCCCAAACAAATTTTGA
GAGAACTCTCCCCCTTGTGAATTATCGATTCTGAAAAAGCCCTTCTTATC
TAGAAATATTATTTCTCTCAGATGTTTTCCAAAATCTCCAATTGGTTTTG
AGTTGATATATCAGACATTTTCTTGAGAAGGTAATTTTTGGATATGACCG
AGATTAAAGGGCAATTTTCCAACTGACGGTTTGCGCGGCGaggaatcgca
cccttacagtgcagaatcggtgaaattcataccatTACAgtgcttttttc
aaattttaaactcttttcgagcaaaaaaaaatcaagattttcgagctaga
tttgctgaaatttccacccatacagtgcatttatccaaagtccaccctta
cagtgcatttcttataatttgaaaaacatacccttaactgccgcacatac
ccgtcggtcaactTGTCTGACTGCCCCCCAGCCTTTGTCACAGATCCAAT
GGGATCCCAATTTCATCCACGGTGGGAAATTGACTTAAACTTTATCCCAT
TGAAAatcatgtaaaaaattgcacttcaaactCTCCGATTGCAATTGGGC
ACCCCATTGGACTCTCGCTCGATTTctttatatggaaaaagttccacctg
ggctgtgagacaggagtgtatAATTAAGTACACCTTTTATTGAATACTTA
AACATTGGATTAATCACTTTATAAGCTTGAAAAAAGAGGGAGGATGGATA
TCATCCAATTTTGAAATCACAACATAAAAGTTCCCGTTAAAAGATGTCAA
ATATAaggaaaagcttcaaataaaaTAATCTGAGATAAAAGCCTTTCCCT
CCCTCCTCTTCTCTATACtcttttagttttattaaatgttactttctatc
tattcttctttattttcattttattttgcttcccATGGcttcaatacacg
tttttttttttattagaacctagtttataagaacatataggctgaaattc
gtcgaaaaattaagaacatcttaagaacatgcccagcctcagtttggaaa
aaatgacaagaaactacaattttttcctctttttaagcagttttaaccga
atttaggggtggatcttcaaaagtcgagagtcaaatattgtccaaatttt
gccaaatttaagggctctttattttgtatcatattgtcgatttagagaag
tctgaaaaattaagaacgcatttaagaacattttaggctgaaaattgcta
aaataataagcacatccaggctcagccaaattttaggtgttctaataaaa
aaaaaaacgtgtattctcaCTTTAAACGTAACTTTCCCTCCCATGAGGAA
GTAAGACTGGGGttcttttccaaaattgttaatgTGTTTAAATTTAAAAG
TTGGTGTTTACATAATTTCATTATTTGAAACTTGAgcatattttttaaag
aatacaGGTTGTAAGAAAAGCTATTCCAAGAAATTGCCAACCACGATTAG
AACCACGTCTTGGGGTGATATCTAAAggctccacttgcgcgcgcttcgat
cacactttttcgagcaaagcttacACGCTATTAGTCACAAGAAAAATGAC
GCAACTCCATTGGcacgatctgacgtaacggttgaaaaagttgaaacatg
ttcgagcgcgcgctacatttttatgacgtaatcttttttccaagcaaaaa
ggattgaagccaaaaggtgcaatcacagcgcgcgcaagtggagaccggcc
ttaaaggtGCATGGGTTTCGGGCTCCTAGCTCCCTACTGGCGGTATCCAG
TCAAAAATAAACGTACCCATTCATCTGGAATGGCCGTGCAAAGTTATACC
TTAAATGCTTGATAACCTTCACTGATTTTCTTCTTACAGTGTaaaagaac
tcaaaatagaaaaaagaaaaaaataatttcactttCCATATAAAGACACA
TGGAGATGTCGGGCAAAATTGACTCCACCGAGCAGAACAATCACAACAGC
AGTGAACCAATTGATATCCGAGAAACCCAAGGTaaaaaaaCTGATTCATT
TTTGCAAGAGAAAATAAATCTCGCGAAGTTGTATGAGATTATTGCTAACT
CGCGAATTTCGTCCATgcggaattttcaaaattatattttcggATCGCGA
AATAAAATGGTGCAAAAATTTGTCTTCAGGGAAATGATAGTCTTTATGAC
TCACTTATAAAACTATAAGATGATTTTTACGAATCTACAGGaccaaaatt
ttcattattttcttacCTTTTCAGAGATATTTAGTGATAAATGGACCCTT
TTCGAACGCTATAAGCTTACAGGCGGTTCCGGAGGTCCAAGGGCTAATTT
CTGACCAAAATAAAGAACCCAGAGGCTCTAACCCCTCTAAATCGCATTTT
CATTTTAGACGATGGTGTTGGTTTGTGTGGATATTTGCTGACATTTTGTT
CGCTCATCATGTTTGTATGCACCTTACCTTTGTCACTACTCTTTTGCTTG
AAGGTATTTATCTTTCTTTGGCTTTGCTAAACTATCTGAGGCTCAGTATA
CCTCAGACTCTAAAGACAAggcttcattctttttttaccttgcaaaaaca
acgaaaatctggtggactgttttacagtccgcctaagcaaaagcatatta
tcATATactactaccgggccacttaattgcgccatccagtctataaaaaa
gcctTAAGTGGACCCCGGACTAGGTATACCTTTGATAAACATACAACCAA
CAAgtcatacacattttttttagattAACTTACCTGATAAGTGGCAGAGA
TGTTTTCTACCGAATTTTCATCAGCCGACCAGATCTTTCCACCAATTTCT
TGTCCTTGGCCAAAAGAAATTCGTACTCTTTTGTGTTCTTTGGAAATCCT
TTACTTAGAGATCTAATTTCCATCGATGAGGTTTGCGACTGTTCTTTTTC
CTCTCATAGATTGTTCAAGAATACGAGCGAGCTGTAATCTTCAGAGTGGG
TCGACTCGTCAAAGGAGGAGCTCGTGGACCTGGTATCTTCTTCATTTTAC
CATGCATTGATAACTACATCAAAGTCGATTTGCGTGTTGTCTCATTTGAT
GTCCCTCCGCAAGAAATTTTGACCAGAGACAGTGTCACCATTACTGTAGA
TGCTGTCACTTATTTCAGAATCTCGAATCCAATTCAATCAGTTTGTAATG
TCGAAGATGCCCAAAGATCCACACGGTTGCTTGCACAGACTACTTTGCGG
AACGAGTTGGGTACGAAGAATCTCAGTGAAGTTCTTTTGGAGAGAGATAC
AATAAGCCATTCAATTCAACGAATTTTGGATGCAGCTACGGATCCATGGG
GAGTGAAAGTTGAACGTGTTGAGATTAAAGATGTCCGCCTTCCACAGATG
TTGCAAAGAGCTATGGCTGCTGAAGCTGAGGCCTCCAGAGAAGCAAAAGC
TAAGGTACGCACTTTTGTACTTAGTTTGTTGGTCCTTGTAACCCCAAGGA
CGGGATGGACTTTTACAATGTTAGCCACATTCATGTACAAGCATAACGGC
CAAAGTATTTTGGCTGAGTGTACATACAGAAAATAGCAGCGTggtaaatt
taaggaaaagttAAGAAAGAGGACCGAAGAAATAACATTGAGAGATGCTC
GATTGACTGTTGGGATTTTAAGTTTGGatctggattttttaaccttggaa
caatagaatttatatcccAATAGGTATTTctataggaatttttatcccta
ctgaggaaaaaagtttcaaaatggtTCTTGATGTCTTACTGTTTAAATTG
ATTTTACAATTACAATAATTAAAGATTTATAAGGATTAAAGAGTTCTAGG
GAGGAAGCTCCTCCCCTTCTTTCGTATAGATCACTATAAAACACTCAAAA
TATTTCCTCCTCCTTTTCTTAGGTGATTGCTGCTGAAGGAGAGATGAATG
CTGCTCGTGCTTTGAAAGAAGCTTCTGACGTCATTTGCGAATCACCACAA
GCTTTACAACTCCGTTATTTACAAACCTTGCAAACCATCTCAGCTGAAAA
GAATTCCACCATTATTTTCCCGTTACCTATTGACATGATCCAACGTACTT
TAGGA Coding sequence (CDS) from alignment at sc0000045_pilon:1567476..1574830+ >XLOC_004970 ID=XLOC_004970|Name=XLOC_004970|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000045_pilon:1567476..1574830+ (Clytia hemisphaerica_ch_hm2_pilon)
gatACTGGTCTTGGATTATGTGGCTGGGTGTTGACCATTTTCTCCCTTCT
CATGTTCATTTGTACATTCCCTCTCTCACtttttttCACACTCAAGgatA
CTGGTCTTGGATTATGTGGCTGGGTGTTGACCATTTTCTCCCTTCTCATG
TTCATTTGTACATTCCCTCTCTCACtttttttCACACTCAAGATTGTTCA
AGAATACGAGCGAGCTGTAATCTTCAGAGTGGGTCGACTCGTCAAAGGAG
GAGCTCGTGGACCTGGTATCTTCTTCATTTTACCATGCATTGATAACTAC
ATCAAAGTCGATTTGCGTGTTGTCTCATTTGATGTCCCTCCGCAAGAAAT
TTTGACCAGAGACAGTGTCACCATTACTGTAGATGCTGTCACTTATTTCA
GAATCTCGAATCCAATTCAATCAGTTTGTAATGTCGAAGATGCCCAAAGA
TCCACACGGTTGCTTGCACAGACTACTTTGCGGAACGAGTTGGGTACGAA
GAATCTCAGTGAAGTTCTTTTGGAGAGAGATACAATAAGCCATTCAATTC
AACGAATTTTGGATGCAGCTACGGATCCATGGGGAGTGAAAGTTGAACGT
GTTGAGATTAAAGATGTCCGCCTTCCACAGATGTTGCAAAGAGCTATGGC
TGCTGAAGCTGAGGCCTCCAGAGAAGCAAAAGCTAAGATTGTTCAAGAAT
ACGAGCGAGCTGTAATCTTCAGAGTGGGTCGACTCGTCAAAGGAGGAGCT
CGTGGACCTGGTATCTTCTTCATTTTACCATGCATTGATAACTACATCAA
AGTCGATTTGCGTGTTGTCTCATTTGATGTCCCTCCGCAAGAAATTTTGA
CCAGAGACAGTGTCACCATTACTGTAGATGCTGTCACTTATTTCAGAATC
TCGAATCCAATTCAATCAGTTTGTAATGTCGAAGATGCCCAAAGATCCAC
ACGGTTGCTTGCACAGACTACTTTGCGGAACGAGTTGGGTACGAAGAATC
TCAGTGAAGTTCTTTTGGAGAGAGATACAATAAGCCATTCAATTCAACGA
ATTTTGGATGCAGCTACGGATCCATGGGGAGTGAAAGTTGAACGTGTTGA
GATTAAAGATGTCCGCCTTCCACAGATGTTGCAAAGAGCTATGGCTGCTG
AAGCTGAGGCCTCCAGAGAAGCAAAAGCTAAGGTGATTGCTGCTGAAGGA
GAGATGAATGCTGCTCGTGCTTTGAAAGAAGCTTCTGACGTCATTTGCGA
ATCACCACAAGCTTTACAACTCCGTTATTTACAAACCTTGCAAACCATCT
CAGCTGAAAAGAATTCCACCATTATTTTCCCGTTACCTATTGACATGATC
CAACGTACTTTAGGAGTGATTGCTGCTGAAGGAGAGATGAATGCTGCTCG
TGCTTTGAAAGAAGCTTCTGACGTCATTTGCGAATCACCACAAGCTTTAC
AACTCCGTTATTTACAAACCTTGCAAACCATCTCAGCTGAAAAGAATTCC
ACCATTATTTTCCCGTTACCTATTGACATGATCCAACGTACTTTAGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:1567476..1574830 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 763-945:7173 |
| Aaloc | 268-762:6210 |
| Aaloc | 172-267:1 |
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