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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:342697..344717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004917 ID=XLOC_004917|Name=XLOC_004917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2021bp|location=Sequence derived from alignment at sc0000339_pilon:342697..344717- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCTCATCAAGACAACTTTCCAAAAGAAAATCAATACAAGCCAAC
CACAATCTGCAAAATCACAACAAGTGAAGAAAAATCTTACGGAGCAAGCA
AAATTGTGAAAAAAGAAGAAATAATTACGTTGGATGAAAATAATAACAAT
CAAACAGAATCGAATGATGAAATTGATGCATCTAAAACTTTCCACAATTA
TCATCATACAAATTATAGTGATCATTACCCAATGGTAAAACGAGGGTATT
CTGCAACCAAAGACGTGTACCCACATGAAGATTTTAAAACAGGACCTGTA
TCACCTAACAGTACACCTTTTGTTACCCCTTCTGACCGCCTGGCAAGGGA
AGCGGACTACATGTTTAACAATCGTTATGCACTGCCACCATACCACCCAC
ACGCGCCACCATATTTACCTCATCATGGATATATAGGATTGCAGCAAACT
CCACCTGAAAATCAGGGTAAAAATGAAATTTAAATATGAAATATTAGTTG
ATCTATTGATTAAAATGAGCCTTTGGTTTTTGGAAAATTTTTGGAATTTT
CTTCAGTGTTTCATCATTTTGATGATCTTATGGCTAATTATATTTTTTAG
GGTTTCTGGCATTTTTATTTTTTATTTTCAAGATTTTGGAAGATTTTCTA
AGATTTTTGGAATCCTTTTGAGATTTAATTATTTAAAAAGTTAAGTATTC
GGACTTTCCAATTTTCCTCTATTTTTTAAAAAATTTTCTAAGATTTTCAA
GAAAGGGAAAAATCCCTTTATTGAGAAGAATTGAGAAAAATAACTTCTTG
TATCATAGATTTTTTTCTTTTAACCAAAAAGCCTCGGAAAGTCCAATGAC
CTCCAAGGAACGCTAAATAGAATTGAAAAACTTTATCTGAACTTCCATAT
CTCAAATTCATAAAAATAATTTTCTATTCTTCGAATTTTCAGGTTCAACC
GAAAATCATCCAAATCCATTCGTCTCTTCAATGGATCATCAATATCTACC
TCCTATCCAGCAATTGGATGGTGGTACACTTCACATACCACAAGGCTTCA
GCCATGCATATCAATGGAAACATATGATGGCCAATCAGAACTCACCACCA
TCACCTATTGTTTCTCCTAGCAACGAGATGCCACCATCTTGGAATAAACA
TGTTTACGCTACCAACGGTGTTAGCTCTCCTACAGAAACGAGCACAAATA
ATGTGACTACCAATAGCCCTACACCAACAATGATAAATGCCGCTAAAGGT
TTTTTTAAAATATTACCAAAAATGTTATGTGAAACACGTTTGTCGTTTTC
AAGAAAGATCTAAAAAGTCGAGGAATAATAGAAGTTCATCCTGAAAAGAA
AACTGTAACTAATACCTGGAAAGCTTTTCTAAGCGCAGATTTTCTCTTGA
AAAATCTTTAAGTTGTATTTCTTTTCTTTTTCAGATGGCTTGACTTTACT
GGATTCTAACGGACATCGGCGTAAACGAACAGCTTATTCACGTGCACAAC
TTGCACAACTCGAAGCACAATTTATAGAAAGCCATTTCTTAACTAGAGAA
CGTCGATGTGAATTATCCAATTGCCTTGGACTAAGTGAGCGACAAGTCAA
AATCTGGTTTCAAAATCGGCGAATGAAAGCTAAAAGGAAATCCATGAGTT
TATCGTCACCACCCCCTGGTTTTGGTGCATATCACATAGTTCGTTTACCC
CCTGGAATGATTCCTGGTCACCATCCAATGGTCAACGTAAACGGACCTTT
TATTCGTCCAGTTTTTCAACCAATCAAAACTGAGCCTGAAACAATGGATT
CACCACCTTTGATGACGTCAGCTTTTCGTCGAAAAAGTGTCGGTGATGTG
CCGACTATGATGCAACCGAGCCGACTCTTTCATCCACGACCAACTTTTTT
TAACGACAGAGATTTTTTTAAGAGTTCAGAACGTGAGTATTATCGCAAAT
TGAGTCCAGTCGAAACGGAAGATCCTCAAGTGAACTTGAAAGCCCCAGAA
GATCAACAAAAAGAAGAGTAA Coding sequence (CDS) from alignment at sc0000339_pilon:342697..344717- >XLOC_004917 ID=XLOC_004917|Name=XLOC_004917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2718bp|location=Sequence derived from alignment at sc0000339_pilon:342697..344717- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCTCATCAAGACAACTTTCCAAAAGAAAATCAATACAAGCCAAC
CACAATCTGCAAAATCACAACAAGTGAAGAAAAATCTTACGGAGCAAGCA
AAATTGTGAAAAAAGAAGAAATAATTACGTTGGATGAAAATAATAACAAT
CAAACAGAATCGAATGATGAAATTGATGCATCTAAAACTTTCCACAATTA
TCATCATACAAATTATAGTGATCATTACCCAATGGTAAAACGAGGGTATT
CTGCAACCAAAGACGTGTACCCACATGAAGATTTTAAAACAGGACCTGTA
TCACCTAACAGTACACCTTTTGTTACCCCTTCTGACCGCCTGGCAAGGGA
AGCGGACTACATGTTTAACAATCGTTATGCACTGCCACCATACCACCCAC
ACGCGCCACCATATTTACCTCATCATGGATATATAGGATTGCAGCAAACT
CCACCTGAAAATCAGGATGGAATCTCATCAAGACAACTTTCCAAAAGAAA
ATCAATACAAGCCAACCACAATCTGCAAAATCACAACAAGTGAAGAAAAA
TCTTACGGAGCAAGCAAAATTGTGAAAAAAGAAGAAATAATTACGTTGGA
TGAAAATAATAACAATCAAACAGAATCGAATGATGAAATTGATGCATCTA
AAACTTTCCACAATTATCATCATACAAATTATAGTGATCATTACCCAATG
GTAAAACGAGGGTATTCTGCAACCAAAGACGTGTACCCACATGAAGATTT
TAAAACAGGACCTGTATCACCTAACAGTACACCTTTTGTTACCCCTTCTG
ACCGCCTGGCAAGGGAAGCGGACTACATGTTTAACAATCGTTATGCACTG
CCACCATACCACCCACACGCGCCACCATATTTACCTCATCATGGATATAT
AGGATTGCAGCAAACTCCACCTGAAAATCAGGGTTCAACCGAAAATCATC
CAAATCCATTCGTCTCTTCAATGGATCATCAATATCTACCTCCTATCCAG
CAATTGGATGGTGGTACACTTCACATACCACAAGGCTTCAGCCATGCATA
TCAATGGAAACATATGATGGCCAATCAGAACTCACCACCATCACCTATTG
TTTCTCCTAGCAACGAGATGCCACCATCTTGGAATAAACATGTTTACGCT
ACCAACGGTGTTAGCTCTCCTACAGAAACGAGCACAAATAATGTGACTAC
CAATAGCCCTACACCAACAATGATAAATGCCGCTAAAGGTTCAACCGAAA
ATCATCCAAATCCATTCGTCTCTTCAATGGATCATCAATATCTACCTCCT
ATCCAGCAATTGGATGGTGGTACACTTCACATACCACAAGGCTTCAGCCA
TGCATATCAATGGAAACATATGATGGCCAATCAGAACTCACCACCATCAC
CTATTGTTTCTCCTAGCAACGAGATGCCACCATCTTGGAATAAACATGTT
TACGCTACCAACGGTGTTAGCTCTCCTACAGAAACGAGCACAAATAATGT
GACTACCAATAGCCCTACACCAACAATGATAAATGCCGCTAAAGATGGCT
TGACTTTACTGGATTCTAACGGACATCGGCGTAAACGAACAGCTTATTCA
CGTGCACAACTTGCACAACTCGAAGCACAATTTATAGAAAGCCATTTCTT
AACTAGAGAACGTCGATGTGAATTATCCAATTGCCTTGGACTAAGTGAGC
GACAAGTCAAAATCTGGTTTCAAAATCGGCGAATGAAAGCTAAAAGGAAA
TCCATGAGTTTATCGTCACCACCCCCTGGTTTTGGTGCATATCACATAGT
TCGTTTACCCCCTGGAATGATTCCTGGTCACCATCCAATGGTCAACGTAA
ACGGACCTTTTATTCGTCCAGTTTTTCAACCAATCAAAACTGAGCCTGAA
ACAATGGATTCACCACCTTTGATGACGTCAGCTTTTCGTCGAAAAAGTGT
CGGTGATGTGCCGACTATGATGCAACCGAGCCGACTCTTTCATCCACGAC
CAACTTTTTTTAACGACAGAGATTTTTTTAAGAGTTCAGAACGTGAGTAT
TATCGCAAATTGAGTCCAGTCGAAACGGAAGATCCTCAAGTGAACTTGAA
AGCCCCAGAAGATCAACAAAAAGAAGAGTAAATGGCTTGACTTTACTGGA
TTCTAACGGACATCGGCGTAAACGAACAGCTTATTCACGTGCACAACTTG
CACAACTCGAAGCACAATTTATAGAAAGCCATTTCTTAACTAGAGAACGT
CGATGTGAATTATCCAATTGCCTTGGACTAAGTGAGCGACAAGTCAAAAT
CTGGTTTCAAAATCGGCGAATGAAAGCTAAAAGGAAATCCATGAGTTTAT
CGTCACCACCCCCTGGTTTTGGTGCATATCACATAGTTCGTTTACCCCCT
GGAATGATTCCTGGTCACCATCCAATGGTCAACGTAAACGGACCTTTTAT
TCGTCCAGTTTTTCAACCAATCAAAACTGAGCCTGAAACAATGGATTCAC
CACCTTTGATGACGTCAGCTTTTCGTCGAAAAAGTGTCGGTGATGTGCCG
ACTATGATGCAACCGAGCCGACTCTTTCATCCACGACCAACTTTTTTTAA
CGACAGAGATTTTTTTAAGAGTTCAGAACGTGAGTATTATCGCAAATTGA
GTCCAGTCGAAACGGAAGATCCTCAAGTGAACTTGAAAGCCCCAGAAGAT
CAACAAAAAGAAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:342697..344717 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 775-1359:586 |
| Aaloc | 469-771:1078 |
| Aaloc | 1-465:2022 |
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