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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000519_pilon:80141..86446- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004736 ID=XLOC_004736|Name=XLOC_004736|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6306bp|location=Sequence derived from alignment at sc0000519_pilon:80141..86446- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGACCATTTCTTGGGATATTAACATTAGTAACGCCGTCATCAAA
GTTTTTGGAAAATATGGATTTGTCGCAATTATTCTTCATTTTTAATATCA
TTGCATTGTGCATCTCAAGGTAAGAAAATACTTAATTTTCAAGGCATCAG
GGATGGATACCTGGAAAAACGGTACTAGATCTGTCTTTTTCCGCAATTCG
ATGTTTATAAATATACACAAAGCCATATTTCCAAGTTAGAGGTTAAGAAC
TACTGCCGATAAGTAGTTGAAACAGGGGTGCAAAATTTGAGACGGGACTG
TTGCCTAATTGTTTATCCAGGTAATTAGGCAGTAACCTGTTTGCATATTT
ACTATTGCTTAAAAAGTTTTCCGTTAAAAATCTTTCTAAGCATATTTAAT
TACACATGCCACGGGCAATTATTTCCGAGCGATTACATTAAACGACAGTT
GTGGTTGGTACAATTGTAACGAGAGATGTAATTTGAACAAAAATACTTAT
TTGAAGTGAACACGCGTACCTCTTGATTTTTCTCGATTGAACACGCATTT
TGGGACACATTGGTTATTTTAAGAACTTTATGCAAAGCTTTCATCTCTAA
GAGTTTTTTCTGACGTCATCACTAAACTCAAGATAGAGAAGGAAATTCAT
AATGGCGCGTACACTTTTCCGTCTTTTCTGACTAAGAAATACTACTTAAC
AAACTTTAGAGTACTGATGACAAATTTCTCTTGAGAGTTCTGGCTCAGGA
TTGAGGAAGTCTAAGTCATGTACTTTGAAGTACTTTTTTCACACATGTAT
TGAAGAGTGAATTTACATGTCTCCTCCTCGATTACTTATAACACGAGTCA
ACTTTCTTTCCGTATCCTTTGTACCTTGAATTTAAAACCTTAATGTTAAA
ATCTGCTGTATTAGATAACTTCGACTTTCAGCGGTTGCTGACCCGGAGCC
AATCTACACGTAAATGGCACGGATTAAAAACTTTGGATCAGCTACGCATA
TTTCAAAAAAAGATTAAAAAACATTGACATCTAGCTAGGTCACGTAAAAA
GTAACGAAAAATCAAGAAAACCGCATATTATTTTGACACAAAAAATCCTC
AGACTAATTCTCCTAATTTTTGAGGGAAAACATTGCATAATTTGATAATC
GCGTTTTCAGACATAGGAAACTAAACTACTTCCCAAACTAGTGTCATGTT
TCCATGCACTATTTTTGAGCTTCGACATTTTGAATCAAGAAATACGACAG
GAAGACCTTTTTGATCTTCATTTCAACTATCAATATTAGTTTTCCAACCA
ACAAGGAACAACCAAATGAAAAGAATCATGAACAAAATACCAAAAATAAT
TTCAAATGTTCAAACTAATTAAGGCTGATTTCAAGATTTCATCTTGGAAG
TGAGAAAGTAAAGGGATCCAGTAGTCAAAGGTGTCCGTCTTTCAGAATAT
ATTAAAGGATCTTAAGAAGATTCTACTAGAATCAAAAAATAAACCTTGTT
CCCTAATATGTTGAGACTATTCATCTATCAGAGCGTCCGTTGATTGAAAA
ATCTTGTCCATCGTCAGTACTCTACTTTCTATGATTTGTGCAAAAAGTCT
ACATGTGAATACCAATTCCTTTCCATTACCGCCAGCATTGACTGTATACA
AGCATAATGTTATAAAATACCTCTTTCTACTTTTTTCAGATCACTGTGCT
ACATCGATCGGACGAGGAACTATTCCAGACAGGTAAGATAGTCTTCTCAT
ATTCTCTTTCACACCCCTGTCTCTCTGAAATGTTAGATTATTTGTAAGTA
CCTGAAAATGGTTCTCCATGCTTCTCTGCTAAATGCCAAGTAAAGATTTG
AAGACTAATACTGGTGAAGCGACCGTCGTCTAAAAGTAGAATTTTCAGCT
AGTATGCGCAAGGTTGTCTGGTCAGGTCTTACTTAATACTTGATATTGGT
GCTACATGTTTCTCTACTAAGTGTGCAGAGATTTAGAGCATAGGAGATAG
ATGAGTCTTGACAAGAAAAAGTCAATCGAAAAACAATTCACCAGATTGAT
CTGAGGGCCTTGTTGTGGGGAAATTTCAAAAAATCTCAACAATAAATCTA
TTCCAAATTTATAAATACCTTCAATGTTCAATTCAATGTTCAAAGATTTG
AGGGCGTAGGTGGAGCTTTTCACTTTTTATATCCGCAATGACGAGACATA
GAAGAAATTCTCATCAAAATACGAAAATTGTTGACAACAGAACACTAACT
TTTCGGGAAAGAGGTAGAATTATAAAATGTTGAGGAGACATTTACTTTTG
TTTTGACTGTCATGTGCGTTTTAAAAATAATACCCCGCATTATGCTTTGA
TATGACTCATATTGTTGTTTTTTCATATGTTTTGTGTTTTGCTGTGAAAA
CTTAAGGCAGTAATGAACAGGCAGTGATTTAAAAATGAAACATTTCTCGA
GTTTCCTTTTCGACTGTATATCCTTATAGTACATGTTTACAATGAAATCT
CAACTATTCAAATTATGTAATGATGAACTTTTGACAGAACTGAAATTATT
TTGGATTCGTCAATCAATGAATTTTTTGATGAGATACATCAAATTTTATA
CGTTGTAGGCAGGCGGCTACTATGCATAAGACGAAAGAGTCGTGTTATTC
GAACTTGCTGCAATAGCCATGTTTCCATCTGATACCAGACCCCTAAATCC
TTGACCGACAGAACAAGAATGAAAATAGACACCTAAAAACTGATCAGTAA
TTATGATCAATATTGCTGGATAAACAGGCGTCGGCCATCAAAGTCAGAGG
TGCTTTTTGTTTAGTTCATAGATTGTAGTCGATTCGGCTGGCCATGAACC
CGTAAAAACAATAAATGATTCTCAAAGCTCTACATTACTGGGCAATATAT
ACAAATGTCGGTAAATACACACGTGTTTTCTTTATATAAGAATTTCTTGT
GAATATGTACTAGACAGGTTCCAATTCAAAATTGTTCCTTCAAGGTGAAC
TTAAAGAGATTGTGAACAATAGTGTCTAGAAAGCGTATCCGCGCGAATTG
ATTTCTTCTTGTCGGCCTTAATTTACAGACCAACAAAATGACGTATGGGA
AACTGTATTTTTTTGACTGAGTTTGAAATCCTGGTCAAATTGAAACCTCA
TGTCCCGTGTGAAATGACAACCTTTTTGTATCTAAGCTATTACTTCTCAA
TATAAATGTCAGTTCCCCTTTAAAAGCATTTTCAACAATGATGACGTCAT
AAAAAACTGTGATGATGCCATTTTTCTTTTTATATGAAAATTCGACATCA
AAAATAATTCCATAGGTCTGATTGGATAGTTTTTTTTATGTGTAAAAAGT
TCCTTGTTTCTTGTGATTTCTCTGTTGTGAATTCTGATTGGTTCATTCCC
CCTTCACTTCATGATGATGATGTTATTTATTTCAAAATGGCGGAAGTCAC
TGCGTTGAATAGATTTTTAAGAAGCGTTTTCAGAAAAGGCAGGATACTTA
GTTAGAACAAGAAGGAACTGCTCTTTGTGTATTCTCATATCTTCTATTCT
TTGACGAGCAGCTTGCTCATATATAATCAAGCAATGCTTTTCATCGACCT
ACTATTCTAAACACTATCCAGTCTACTTCATATCAAAGAGTGAACCTTTA
TTTTTGTTGATATTTGGCGACCGCGCGTACTTGGAAATGACCGCTTTTGT
ACGCTTGGTGTGCTTTTTGGTAGCAATGTCATGTGCTTGCTTTGGGGTAA
GGAAATCTTTCAATGCTAACTTCTCTAATGGTATCTTTATTTATCGCTTT
GATAATTATTAAGTGCTGAGTAGCAATCAATTAGCCTGATCATTAACAGA
TTAATTAGAAGAAGATATTTTTTTGAAATGACCTTTCGTTTTCGAACACG
AAGTTTATCACAGTGCTTCAGCCAAATGTTTATTTTGTAAGGTTACTTTT
AATTAGATGCCGCTGTAACCATGTAAAGGTTAGTGTTTTAGTATTAAAGA
TTTTGATGCAGAGACAGTAATATACCATAACTCATTCCGCAACGCCAGCC
AATACTCTACAAGTAGTTTGACGTGTTGAAGAAATTTTGTCTCAAGAGAT
CAATCACGGTGATAAATTAGGAAAGATGACTTTTGAATGAGTGCATTTCA
ACGAGTATTCGTTCGTTGTATTCAGGTAGGAAGCTATACAGCTAGTTAAG
TGAGGTTTGTTATGATTGCAGATTAAGTTCTTGTGTAAAACATGTCTTAC
GGAAGTGGGGTAATGATCTCATCGTGGACTCACTTGATGCAGATGCGAAA
TTTGAATAATTAGAAATATTCCAGATTTTTGAAGAAGAGTACTGTAGTGG
AATCGAACCTAGAATATTCACAAAAGTAAGATAAATAGAGATTAAATGTT
GACTACCACGGGTGTAATGTAATATTTGAATAATATTGCGTTTCGAAAGA
CCTTCAACAGATATTGATTGAAGGGAGATCGAGATTTCATTCCGAGTCCC
AGCTCCTTCAATATAACCCAGCTGGCACACAACGTTCTTTTAACGTTTAT
CTAACGTTCACAACGTCCATATAACGTTAGATGAACGTTAAAACAACGTT
GTGTGCCAGCTGGGAGGTATAGCAGTATCGGCTAGCCGTAGACTCCCTGA
AACAATCGAAAAACTGCCTTCTAAAAGTCCTATATTACTTGTCTATCCAC
GTCAAGTATCGACTCTTTCTCATCCAGACAGTGAGTACCTAACTAATGAA
TATTCCCATTGTCTTCATCTTCAGGAAATGGAGCGCCTCCGTCAACTAGA
CCAACACTATCGCATTATGATGAGAACGTCAGACAGGTTCAGTACGCCTT
TCAAACGTATCACAAGATTGTTTCATACTTTGGTTCACAAGAAAGTCCGG
ACACATGTCCGAATCAATGATAAAGTCATCGATGCTAATGGCATGGACAA
AAGTAAAGATGGTAAGTGGAGAGATCTCTTTCATTACGTTAAAACAATGT
CCATTTTACGCCCATCACATACATATAACGTTTGATGAACGTGTGTTTTG
AAAACGAAAGGCGATCTTTGAAAATGTTAGAAAATTGTGAAACAATTGAT
TTTAAATGAGTTTCCTTTTACATATGCCGCACAACCCCAACTACCATCCA
GCTGATGAGTTCCATTCTTAATCTCTGAGTCAAATCCAGTCCGTCAAAAA
GCTAATAACTTAACATCAATGATCTTTTTTTTAGCATATTTGGTGATTGA
ATCCGATTCCTTTGGCACTATCAAGATCCACAGTATGCAGGAACCAATCT
ACTACTTGTGTATCGGAAAAGACGGAAAGCCAATTGGAATACCCAAGGTA
AGTCAAGAGATTCACATGTTTTGAAAGAAGACTTTTGAGGGATAAATTTT
CTATAATACTAAAAAAAGGTGACAATGCCCTAACTTTGACTTAATCTCCT
TGATAGGGTTTTTAAATCTTTGTCATTATGTCCATTATAGGTATCTAGTG
ATCCTTTTCTTTGTTTTTCCGAAATTAGATGAATCTATACCTAGTAGTCT
GCGATTAGATGCTATATCACATAAAGAAATATATACTCTCGGGTACCTAA
TAGCCGTCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGACA
TTCTTATTCCAACCCCCCCGCTTATTAATTTTTGGAAAAATATTTTTGAA
AGTTCCCTCTTTTGTCCTAATTCTGCTGTATTAGTCTACTTTTCAAAAAT
TTTCCACCCAGGACATTTTTATTCCAACCCCCCCCGTTTATTAAGTTTTT
CGATTTTTTCCAACCCCCCCGCTTATTCCAAACCCCCCGGCTATTAGGTA
CCCGAGAGTACGCGGCCTAATCTCGTACCGAGGGCCACATGCATCACTTT
TTGATTTTACGTGACGTGATATACAAACCTTTCGTGAGTGCTATCAGAAT
CATAAAACGCGAACTAAGGGACTGTGTTGGAGTTTGGTGTTTTAACTCTA
CATTCTTCACTCCAGGTCCAACTACATGCTCAACTGTACGATGTCAACAA
TTGTATTTTCAAAGAACAATTCACTCATAAACACGTCCTGTTCAAATCCA
CTAAATTCTACAACAAAAAAACGAACACTGGCTGTTTAGCATTCAAGAAA
AATGGGAAAGGTCGTCGTGTGACCAGGTCTAAATGTGGACATCGAAGTAC
TTTGTTTTTGGAAAGAAAATCGAGAATTATCATTGATATACATAATGATG
GGCCACTGAAATCGAGGCTGATTTCCCTCCTTCGTAAAGATCGCAAGAAA
AGTTAG Coding sequence (CDS) from alignment at sc0000519_pilon:80141..86446- >XLOC_004736 ID=XLOC_004736|Name=XLOC_004736|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000519_pilon:80141..86446- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGACCATTTCTTGGGATATTAACATTAGTAACGCCGTCATCAAA
GTTTTTGGAAAATATGGATTTGTCGCAATTATTCTTCATTTTTAATATCA
TTGCATTGTGCATCTCAAGATGGCTGGACCATTTCTTGGGATATTAACAT
TAGTAACGCCGTCATCAAAGTTTTTGGAAAATATGGATTTGTCGCAATTA
TTCTTCATTTTTAATATCATTGCATTGTGCATCTCAAGATCACTGTGCTA
CATCGATCGGACGAGGAACTATTCCAGACAGATCACTGTGCTACATCGAT
CGGACGAGGAACTATTCCAGACAGGAAATGGAGCGCCTCCGTCAACTAGA
CCAACACTATCGCATTATGATGAGAACGTCAGACAGGTTCAGTACGCCTT
TCAAACGTATCACAAGATTGTTTCATACTTTGGTTCACAAGAAAGTCCGG
ACACATGTCCGAATCAATGATAAAGTCATCGATGCTAATGGCATGGACAA
AAGTAAAGATGGAAATGGAGCGCCTCCGTCAACTAGACCAACACTATCGC
ATTATGATGAGAACGTCAGACAGGTTCAGTACGCCTTTCAAACGTATCAC
AAGATTGTTTCATACTTTGGTTCACAAGAAAGTCCGGACACATGTCCGAA
TCAATGATAAAGTCATCGATGCTAATGGCATGGACAAAAGTAAAGATGCA
TATTTGGTGATTGAATCCGATTCCTTTGGCACTATCAAGATCCACAGTAT
GCAGGAACCAATCTACTACTTGTGTATCGGAAAAGACGGAAAGCCAATTG
GAATACCCAAGCATATTTGGTGATTGAATCCGATTCCTTTGGCACTATCA
AGATCCACAGTATGCAGGAACCAATCTACTACTTGTGTATCGGAAAAGAC
GGAAAGCCAATTGGAATACCCAAGGTCCAACTACATGCTCAACTGTACGA
TGTCAACAATTGTATTTTCAAAGAACAATTCACTCATAAACACGTCCTGT
TCAAATCCACTAAATTCTACAACAAAAAAACGAACACTGGCTGTTTAGCA
TTCAAGAAAAATGGGAAAGGTCGTCGTGTGACCAGGTCTAAATGTGGACA
TCGAAGTACTTTGTTTTTGGAAAGAAAATCGAGAATTATCATTGATATAC
ATAATGATGGGCCACTGAAATCGAGGCTGATTTCCCTCCTTCGTAAAGAT
CGCAAGAAAAGTTAGGTCCAACTACATGCTCAACTGTACGATGTCAACAA
TTGTATTTTCAAAGAACAATTCACTCATAAACACGTCCTGTTCAAATCCA
CTAAATTCTACAACAAAAAAACGAACACTGGCTGTTTAGCATTCAAGAAA
AATGGGAAAGGTCGTCGTGTGACCAGGTCTAAATGTGGACATCGAAGTAC
TTTGTTTTTGGAAAGAAAATCGAGAATTATCATTGATATACATAATGATG
GGCCACTGAAATCGAGGCTGATTTCCCTCCTTCGTAAAGATCGCAAGAAA
AGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000519_pilon | genome | sc0000519_pilon:80141..86446 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-753:292 |
| Aaloc | 352-462:1071 |
| Aaloc | 163-348:1533 |
| Aaloc | 121-162:4617 |
| Aaloc | 1-117:6307 |
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