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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000293_pilon:79432..82927- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004581 ID=XLOC_004581|Name=XLOC_004581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3496bp|location=Sequence derived from alignment at sc0000293_pilon:79432..82927- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGCAAACACTTCATCGCTTGAACAGGACATTGGTCCGGTCAATGAACA
TTTCTTTGGTTTGATAAATGTAAGTCCTCTTATTGATATGTTTAAAGTAG
AGTCTTGCTTTCTTTTCTTGAAACAACCCACTTGTATCTATCACTGAATA
AAATTTCTGAACTATTAATTTTTGATTTCAGTTTGGAAACACTTGTTACT
GCAATTCAGTGCTGCAAGCCCTCTTCTTCTGCCGTCCGTTTCGTGAGAAG
GTTTTAGCTTACAAGCCGCTGAGTAAACGCAAGGAGAACCTTCTGACCTG
TTTAGCTGACTTGTTCAATAACATTGCCACTCAAAAGAAGAAAACTGGCG
TTATTGCACCCAAGAAATTTGTAACCCGACTACGAAAAGAAAATGGTAAT
CCTCAATTCATTTCAGTCAACATACATTTAAAACATATAAGAATTTTGAC
TGTGACTCGCCTATTATAACACATTTCCACCACTTTGATTCCTCTTGGCA
AGTGGCGAAATTTACTCATTTTCCCCTAACGGAATTATTTTAAGGAAATG
TTCTTTAGTTCTTAGTTACGTAATCCTGTCATATACAAAATGGATTTGAC
CTTTCTTTCAGAGCTCTTCGACAATTACATGCAACAAGATGCACATGAAT
TCTTGAATTACCTTCTCAACACCATCGCTGAAATATTACAAGGTCCGTCT
TTTATTAATTTTGCATGGGAAAATTTGCTAAGTCAAAATGTTTTCTGAAT
TTTTGACTTCTGTGAAACGTACTTCACCCTTATAGAAGAGCTAAGAATTC
CATGTCTCAGAATAAGAACCCAACTCTCTTTACACGCTCCACCCTAACCC
AACGATCCGATCCTTCAAAGAAACCTCCAACCCCTTCGTCTTCTTTTCTT
CTTTACTTTACCCTCTAGATAGGGATTCATGCTTAGCTCGCTTTTTTCCA
GGTGAGAAGCAGCGTGAAAAGGAGAAGGATCGCGAAAGAATGGGTAGCGT
GAGTAGTGTGAGCAGTAAAACAAGCGCTAGCTCAGGTTATTCATCAGCTA
CCATGCACTCGACATTTAAGACACCTCCTGAACCGACTTGGGTGCATGAT
ATCTTTGAAGGGACGCTCACCAATGAAACAAGATGTCTTTGCTGTGAAAC
CGTATGTTGAGAGTTTTACATTTTTTAACACGTGTCTAAGTACGTTATAA
TTGAAAACTTGGAATACAAATGTTGACACACGGATAAAAAATAAATAAGT
TTTTTTTCTCCATTAGGTGAGCAGCAAAGATGAATCGTTTTTGGATATCT
CAGTTGATGTAGAGCAAAACACCTCCATTACATACTGTCTCAAGTTTGTA
TTCCATTCTATTCATTCGTGAAATCCTCAGAAATCCTTAAACCTTCGGGA
ATGGATGCATAATATGCACATTAAAAGACTACAATTTGTCATAAAAATTA
GATTTGCCTCTTGCATTCTTAAATTAAATTTATCCCCGGATCGAATGGCA
TGCATCTGCTATTAAAAAAAAAATATTTCTTTTCAGAAACTTTTCGTGCA
CAGAGACGCTGTGTAGCGAACAGAAATATTTTTGCGAAACTTGTGGAAGC
AAACAAGAGGCTCAAAAGAGGTATAGAGATTTGTCATTCACTATTTGGCG
CTGTCGATTTTTTTAGAAGAAGTTTACCACAACTAATATGTATACTCCAT
GGTTAAAAAGATGAACTTTCTGCCCACCACTCTTTCTTATTCCATTCACA
GGATGATGGTGAAAAAGTTGCCACAAATTCTTGCGTTGCATTTGAAACGA
TTCAAATATGTGGAACAGCAACAAAGATACACAAAACTCTCACATCGAGT
CACTTTCCCATTGCAACTACGTCTCTTCAACACTGTAAGTCTACTGAGAT
TGTCTGATTAAATTTTTTTGTTCTCGAAAAGTTGGTCACTTGTCTGACTT
TTTCCCCTCGACAAACTCTGCAGAACTTTAAAACCGAAGCGTTTATTTTA
TTTCAATGTTTTTTTCGTTTTTTTAGTCGGACGATGCAATCAACCACGAT
CGTTTGTATGATTTGGTGGCCGTCGTTGTGCACTGTGGAAGGTTTGTTCA
TTCTGAATAAATATTGGGGAGAAGAATGCCCAAAGACCTTCTAACTAGGC
GATGTCAAACGAACACTTTCCAACTGATTCGATTACTGTTCGATTATATC
TATTGTTCGATTGTGTTCGGTTAATTCGATAGAATTCGATTGTTCGATAG
TGTTTGATGAATGATTAAGTTCGATTAGTTCGATTGTTCGTTTGACATCG
CCTGGATCTAAACACCGTGCTCATTACGCCTTAACAGCTTACACTCTTTT
TTTTATAAGCATACGGGAAAATCGGGTCGAGGCTCATTTTCAGCCTTAAT
TTATGCTTATTTATATGCTGAGACTTAAATTTGTTGATTTTCTTTGGGTT
CATGGAAATTTCGAATTTTTAAGTCGGAACATTGATTTGGCTCAAAGAAT
GAAAGTTTTTGGTGAAAATCTTTGGTCCAAGAAAGCACAAACAGTTTTAA
AAGCAACCTTAAAAAGGTCAGCGGTTTAGAAAAGCTGCACACATTTTTGC
ATTTCACCTTGGAGGTATGCTTAGCACTATGCTTATTTTTTTTGCCGAAT
TTGAGCCTAAGTAGCTTATAAACAATAAGAGTGTATCTCCACAAGAACGC
TAGAGTTTTTGTCTACTTTTGACTCGATCAATCTATGTTGTAAAATTGTA
ATTCAATCCTTTGGAAACAAGTAGACACAAAGGAGTGATTGCAAAAAGTC
AGATTGTTTTCAATGTTAGCGGAATTCAGTTTAAAGTAACGATAGCCTTA
ATTTCTTTTACAGTGGTCCAAATCGTGGTCATTACATAGCAATCGTTAAA
AGTCATGGCTTCTGGCTACTTTTTGATGACGACATTGTGGAAGTAAGCAA
TGACTCTTTCATTCGAATCTCTTATTGTTGTTAGTGATTTTTTACTGTAG
CGTTAAATTCATGTGTACAGTTGACCCTCTCTAATTCGATCTTCAAGTGA
CCAAAAATTCTCATCGAATCGGAGAAAGATTCAAATTATAGAGAGTAATT
TAAGTCACTTGTCAGCTGAGGGAACCAATATTTCAGAATTATAGAAAGAT
TCAAATAGAAGAGGTTCGAATTAGAGGGAGTTACCTATGTTTGACCTCTC
TGAGTTTTTTGCATCGACGACAAGATTATCTTTTAATTATGGAACGTTAG
TAGATCTGTCTAAACTAAATGGTTAAGCTCAGGACAAAAGTAGGCTGGAT
TGGTGGTCTGCGAATGTTTTTTGGTAGCGCTGCATTTGCATGACTTCAGG
TACCCACAGTAGCTTTCAATGCAAATTTTTCTTAATTTCAGAAAATCGAA
TCACATTCATTAGAGGACTTTTTCGGGCTGACCACGGATGTACAAAAGAA
TTCCGAATGTGGATATATTTTGTTCTATGAATCACGGAAAGTGTGA Coding sequence (CDS) from alignment at sc0000293_pilon:79432..82927- >XLOC_004581 ID=XLOC_004581|Name=XLOC_004581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000293_pilon:79432..82927- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGCAAACACTTCATCGCTTGAACAGGACATTGGTCCGGTCAATGAACA
TTTCTTTGGTTTGATAAATGGAGCAAACACTTCATCGCTTGAACAGGACA
TTGGTCCGGTCAATGAACATTTCTTTGGTTTGATAAATTTTGGAAACACT
TGTTACTGCAATTCAGTGCTGCAAGCCCTCTTCTTCTGCCGTCCGTTTCG
TGAGAAGGTTTTAGCTTACAAGCCGCTGAGTAAACGCAAGGAGAACCTTC
TGACCTGTTTAGCTGACTTGTTCAATAACATTGCCACTCAAAAGAAGAAA
ACTGGCGTTATTGCACCCAAGAAATTTGTAACCCGACTACGAAAAGAAAA
TGTTTGGAAACACTTGTTACTGCAATTCAGTGCTGCAAGCCCTCTTCTTC
TGCCGTCCGTTTCGTGAGAAGGTTTTAGCTTACAAGCCGCTGAGTAAACG
CAAGGAGAACCTTCTGACCTGTTTAGCTGACTTGTTCAATAACATTGCCA
CTCAAAAGAAGAAAACTGGCGTTATTGCACCCAAGAAATTTGTAACCCGA
CTACGAAAAGAAAATGAGCTCTTCGACAATTACATGCAACAAGATGCACA
TGAATTCTTGAATTACCTTCTCAACACCATCGCTGAAATATTACAAGAGC
TCTTCGACAATTACATGCAACAAGATGCACATGAATTCTTGAATTACCTT
CTCAACACCATCGCTGAAATATTACAAGGTGAGAAGCAGCGTGAAAAGGA
GAAGGATCGCGAAAGAATGGGTAGCGTGAGTAGTGTGAGCAGTAAAACAA
GCGCTAGCTCAGGTTATTCATCAGCTACCATGCACTCGACATTTAAGACA
CCTCCTGAACCGACTTGGGTGCATGATATCTTTGAAGGGACGCTCACCAA
TGAAACAAGATGTCTTTGCTGTGAAACCGTGAGAAGCAGCGTGAAAAGGA
GAAGGATCGCGAAAGAATGGGTAGCGTGAGTAGTGTGAGCAGTAAAACAA
GCGCTAGCTCAGGTTATTCATCAGCTACCATGCACTCGACATTTAAGACA
CCTCCTGAACCGACTTGGGTGCATGATATCTTTGAAGGGACGCTCACCAA
TGAAACAAGATGTCTTTGCTGTGAAACCGTGAGCAGCAAAGATGAATCGT
TTTTGGATATCTCAGTTGATGTAGAGCAAAACACCTCCATTACATACTGT
CTCAAGTGAGCAGCAAAGATGAATCGTTTTTGGATATCTCAGTTGATGTA
GAGCAAAACACCTCCATTACATACTGTCTCAAAAACTTTTCGTGCACAGA
GACGCTGTGTAGCGAACAGAAATATTTTTGCGAAACTTGTGGAAGCAAAC
AAGAGGCTCAAAAGAGAAACTTTTCGTGCACAGAGACGCTGTGTAGCGAA
CAGAAATATTTTTGCGAAACTTGTGGAAGCAAACAAGAGGCTCAAAAGAG
GATGATGGTGAAAAAGTTGCCACAAATTCTTGCGTTGCATTTGAAACGAT
TCAAATATGTGGAACAGCAACAAAGATACACAAAACTCTCACATCGAGTC
ACTTTCCCATTGCAACTACGTCTCTTCAACACTGATGATGGTGAAAAAGT
TGCCACAAATTCTTGCGTTGCATTTGAAACGATTCAAATATGTGGAACAG
CAACAAAGATACACAAAACTCTCACATCGAGTCACTTTCCCATTGCAACT
ACGTCTCTTCAACACTTCGGACGATGCAATCAACCACGATCGTTTGTATG
ATTTGGTGGCCGTCGTTGTGCACTGTGGAAGTCGGACGATGCAATCAACC
ACGATCGTTTGTATGATTTGGTGGCCGTCGTTGTGCACTGTGGAAGTGGT
CCAAATCGTGGTCATTACATAGCAATCGTTAAAAGTCATGGCTTCTGGCT
ACTTTTTGATGACGACATTGTGGAATGGTCCAAATCGTGGTCATTACATA
GCAATCGTTAAAAGTCATGGCTTCTGGCTACTTTTTGATGACGACATTGT
GGAAAAAATCGAATCACATTCATTAGAGGACTTTTTCGGGCTGACCACGG
ATGTACAAAAGAATTCCGAATGTGGATATATTTTGTTCTATGAATCACGG
AAAGTGTGAAAAATCGAATCACATTCATTAGAGGACTTTTTCGGGCTGAC
CACGGATGTACAAAAGAATTCCGAATGTGGATATATTTTGTTCTATGAAT
CACGGAAAGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000293_pilon | genome | sc0000293_pilon:79432..82927 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1006-1110:106 |
| Aaloc | 928-1005:633 |
| Aaloc | 862-924:1471 |
| Aaloc | 730-861:1745 |
| Aaloc | 646-726:1960 |
| Aaloc | 568-642:2231 |
| Aaloc | 370-567:2544 |
| Aaloc | 289-366:2884 |
| Aaloc | 73-285:3316 |
| Aaloc | 4-72:3497 |
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