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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000395_pilon:224502..229161- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004384 ID=XLOC_004384|Name=XLOC_004384|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4660bp|location=Sequence derived from alignment at sc0000395_pilon:224502..229161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGACGAGCTGGGGATACAGTTGAATGACACTCCTCTTTTGTAAGC
TTTATTAACATTAAAATTATTTTAAGGTTTGTTATATCATTTAAGGCGAG
GCCAGTTTAATTTGTTGTTTTACGGGCCAAGCTACCCAAAAAGAAGGGTC
AGTCGATCGGCGAAAAAATAAAAATAAAAGTAGAATTTTATCTAGATAAA
ATGTCTTAAAAAGGCAGCAAAAACTACTGCATTTTGACGAAAATGCGAAA
TAAAAATAAAAAGACACAAAAAGCTCGCAGAAGAAGAATAGAACATAACA
TTTTCAAAACTTTGGAAAAACTACACCAAAATTTTGAAAATTTGACAGTC
TCTAAAAAAATGAAAATAAAAATGTACTACCAAAATCAGTTTAATTTTTA
TTTCGATTTTTGCAATTTCAGGGTCGGTCGGGCCCGTAAAACAAATAATC
AAATTGGTCTCACCTAAATGCATGATAAAAGTCTACAATGTAACTCTTAT
AAGAGAACTTATCTTCACAGTAGTTATTTGATTTGGTTTTGCGACAACGT
TTTTGACTAAATCCTCGTGCAAAAGAATTTTTAATATTTTTGTTACCAGA
CTCGGCCGCATATTGAAATGCTTGGTGACAACTTTGATCCCAATTGAGCT
GAGTGAGGCGTTTTTAAGCATTTCCATCAGTTGGAAAGGATAAGCACTGA
TCTATTGGTCGAAGAAATTGAAATTCTCAAAATATTATGCATGAAACTAA
AGAAACTGTATGTGACGAAAATTTCTTTATTTTCCTTTATTTTTTTTCAG
GGAAGAAGAAGACAAAAAAGCTCATGTAAGTAATTGATTTTCATTCAATT
TAGCATTCTGTCAATCTTTGGTTTTGTTGAATGAAAAATAATTTGCACCG
TGATTTACATCATGGAAAAAAACAACAAAAAAACATCATAACTTTAGAGA
ATGATGATGACTTGTTTCTCTTTTTTTATTTTTTATTAACATCTCTTTAA
TCACCATTAAAATCTACGGTATAATTTATAAGGTTTCCTTTTTGAAAAAA
AAAAAATAATAATATTAATAAAAATATATTTACATCGTTTTCGTTTTTCC
TTTATGTACTAATAAAAAGGGGAAAAAATGTGTGTCAGAAGGGGAGCTAC
AGTGAAAGTGGGGGCGGTACGATGGCGTAAGGTGAAAATAGGAATCACCT
CGAAAGAGGGAGAGACTAAGGGTCAGTGTAGACCGAGACTAAAAAATCTT
AAGGACGGACTTGAGTTGAGAGTAATAAGGACTAAAGTATACTAAGAAAA
AATTAAGGATAAATTAAAAATTCGTCGTCAACTTGTGCTTCTTGGGGCTT
AGCAGGAGGTCGATCACATTGATACCCCCCTCCTTTTGTATGAGATGCTT
TCTATATTGAGCGGTCTAAGAGTTGTCTTGTTAGAACCGTCTTACGCTGT
AGTTTATATTGCATGCAAGCTTACCAGACTTTGAACCACTAGGGAACAGA
ACAACACTCTCACCTCATGCATGATGTATAGGGGAATCGATTCTTAGCAC
TCTCGTGGACAGACTTCTTGAAGCCAATTGCCCTCACATGGCATTGGTAC
GGCGAAGGTACCTCAGGTGGATAAATTTACGCGTAGAGAAATCAGGAAAG
CGGCTTCTATTTTCCCCTAATTTCTTTCGCATTCATATTTTGGGTTATGG
AGTTGAATCCCAACCTCTTTTGGACGGTAGTCAAGATTGATAACCACTAA
ACTACTGGTGTCTTTACCCTTTTTCCTGACACACTGAAATGGTTTTTGAA
AAGACTTTGAGTTTCATGGTTTATAACTTTTTAAAAGGTTCGACAAGATT
TCTTTCATTGAACCGCTGTGCACATTAAATAAAAAGGTTTTAGTTTTACA
TAAGTGTTCCCGTTTCATGTCAGACACATGACTCATCGGGACGGTGTCTT
CCTATTGTTATATTATGCTGATATAAGCAAAAAAATTTTTTTCTTTTCCT
CTTTCTGACTAATCTTGCTCCATATCCGTGTCAATCCAATGTGAAAAAGT
TAAATTGAAATGACGAGTAAGAAAACGATATCGCTCATTATTTAAAAACA
AGACCTTGTTAAAGTACATATAAATAAAGAATCGTCATTTTTGAATTTTC
AGGATAACTTGACGATGTTACTGACGAAGTTATGTCGACGTGTATCCGAT
CTTGAATTAGCTCTCGATCGCAAAGAAATAGAAATGTACAAACTACGAAA
TTACTGCTCAAAGAAATGTGATCATTTTGAACGTACCATAGCTGAACTAT
CCAAAATACTTCCTAGGACATGCTCGCATGATTCTATTCATCATAAAAAA
CAATTTAGAAAGAATTTTGGTAAAAGACTCAGTGAAACGGATGATTTTCT
TCGTAACAACAACAGCAACAACAATAATTGTGATTTTGAAAACTTGGAAT
CTCACCACCAACAACGGAAACGTAGACAGATCAATGAAAACACATTCGAA
AAATCGTCGTCCAACACACCAAATGATTCTCTGCACGATCCACCAATGGC
GACAAGTGAACCTATTTCACCACTGGATACAAATATACTTCATTTACGAA
CTGATCGTCAGAAAGAGACTTCAAAACTACACCGGCCCTTCATTGGATCA
ATTACGCGAAGAACTTCAGGTAAGTGATTCAGGCCCGGCGGAAGCGGGGA
GATTGAGGAGACTTCAGCTTCCTCACTTATGAGTAAATGAGATTTTTTTT
CACAAATTCCTAGCGAATTTTACACATCTTTAGCCTTCAGCCTCTCCACT
TTTACGGTTGTTCCTCCGGACCTGTGATTTGTTATTTATTAAGCTTTAAT
TTGGCCACTCCTGTCTGCCTTACAGGAATTTGCTCATTTAACTTCAATGA
ATAAACACTGGATAAGCCAAAACAAAATTTAACTTCTCTAGTGTACTCTG
CAAGGTAGGACCCGATGTAGCTACATGTTTAGGATTTATCACAATTCATA
CTAGATTTTATAAGCTGCAAAGGAGAATTCGGAATGCTTACCCCTAATGG
TCTTGAAGCAGTCGGATGTAACCTAAAGGCTCCTCTTTCGATAGCTGTCC
ACCCGAAGTTAGGGAAGGGCGTCACTCTTTTGTGCTGGATTGCTCCACTT
ACCCTTGATTCTTCCCTTAATTGCTGAGCATCAAGCAGAGAGGCATAAAG
TGCCATTTTTGTGTACGAAGTATTTGGTATGACCCGGCCAGGGATTGCAC
CAATAAGCTTATGCACCGCAGCTGGATACTCTACTTTCATGCTACTTAAT
TATGCTTGATATTTTAGAACTCGTGCATGACCAGAAGAGCACTAATGAGG
AAAGAAATGAAACCCCTTCGAGTATCGAACAATTGCCTCGACACATCTCT
ATGTACGATACATCTCAAGATGATATCGATGACCAAAGTAAAGATAATGA
TGACGATTTGAATGTCTCGCAAACCGATTCTGACATGCTGGTAGAAGTCG
CATCTGTATGTGTCATCAGTAGTTCAGATGAGAGCGGAGACAATGATGGG
AATCTGCTTCAAAGTCACCAAAAAGGATCAAGAGGTAGAAAATGGTCAAT
CTCACGTGAAGCAGGATCTAAACAACTAAGTGATGACATAAATAGTGTGT
CACAATTTCTATCAACGGAAGATTTTAGTTTTGACCACAGACGTACTATT
ATCGGGGAAATGCCAATTCCAGAAGAGGAGATCAATAACAATCAAATTGA
TTCACCATTTGCCAGAGATGGGAAGATTACACTCAAAGAGTACCAACGAA
GACGTCAAAATTATCTCGCCATGACCGAGAAGCCTTTAACACTAGAACAT
ACTGATATTAATCAGAATGACCAAGAAATTTCTAGATTGTCTCCAGAAAT
CAGTAATATTTCCCAAATTAAACTCGGCGAAAAAACAAAAGTTACAGAAA
GCTTTATTCAAGATAATATTGATGACCAGCCAAGTAGCCAAAACGAGAAC
ATTAGAAATCCTGGAACTAGCTTTGAGCAACAAAGTGATGATGAGAGCTT
GAAATCCAATAAAAGTTCCTTCAAAGAAAGCAGTTCCTCTGATGATGAAG
ATTCTAGCTCTTCTAGCAGTAGTGGTGAAAGTAGCTCCAGCGATGAAAGC
TCTTCTGAGGGTCTCTCTGAACATGACGAAACAAGCTCTCAAATAGAAAG
CCAAGATTGTGAAAATGTTGATTTTGACCTGATTGAATCAAAATTCGAAG
TCTTGACTCCTGTCTGTAGTGTTTACCGATGGAATATATCAGAGTTTAGT
AGTAAGCTGTTCCGCAGTGATTTAAAGGTGTTTTCAAAACCGTTCAAAGT
GCGTGATATCGATAATTCAAATACGTTTGAATTAAAAATTACCTGGTTTA
GTGAACTGAATGACGGTCTATCTATCGAGCTACTGGAAAATGGAATTAAT
CCAAGAATCGAAATGAATGTGATTCTGACTTGTGAAGGGAATGGTTATTT
TAATAGTCAAACTCTGATTGCCAATTCGAAACAGGATAAAGCATTTCTAC
ATATTAACCATGTTAATGTTGCGACATCGGAATTTTGCAACTCAAAATCA
GTCATGGATTTTATTGAAAACGATACACTTTTCATAAACTGCTATTTTGA
GTTTTGCTAA Coding sequence (CDS) from alignment at sc0000395_pilon:224502..229161- >XLOC_004384 ID=XLOC_004384|Name=XLOC_004384|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3858bp|location=Sequence derived from alignment at sc0000395_pilon:224502..229161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGACGAGCTGGGGATACAGTTGAATGACACTCCTCTTTTATGAAT
GACGAGCTGGGGATACAGTTGAATGACACTCCTCTTTTGGAAGAAGAAGA
CAAAAAAGCTCATGGAAGAAGAAGACAAAAAAGCTCATGATAACTTGACG
ATGTTACTGACGAAGTTATGTCGACGTGTATCCGATCTTGAATTAGCTCT
CGATCGCAAAGAAATAGAAATGTACAAACTACGAAATTACTGCTCAAAGA
AATGTGATCATTTTGAACGTACCATAGCTGAACTATCCAAAATACTTCCT
AGGACATGCTCGCATGATTCTATTCATCATAAAAAACAATTTAGAAAGAA
TTTTGGTAAAAGACTCAGTGAAACGGATGATTTTCTTCGTAACAACAACA
GCAACAACAATAATTGTGATTTTGAAAACTTGGAATCTCACCACCAACAA
CGGAAACGTAGACAGATCAATGAAAACACATTCGAAAAATCGTCGTCCAA
CACACCAAATGATTCTCTGCACGATCCACCAATGGCGACAAGTGAACCTA
TTTCACCACTGGATACAAATATACTTCATTTACGAACTGATCGTCAGAAA
GAGACTTCAAAACTACACCGGCCCTTCATTGGATCAATTACGCGAAGAAC
TTCAGGATAACTTGACGATGTTACTGACGAAGTTATGTCGACGTGTATCC
GATCTTGAATTAGCTCTCGATCGCAAAGAAATAGAAATGTACAAACTACG
AAATTACTGCTCAAAGAAATGTGATCATTTTGAACGTACCATAGCTGAAC
TATCCAAAATACTTCCTAGGACATGCTCGCATGATTCTATTCATCATAAA
AAACAATTTAGAAAGAATTTTGGTAAAAGACTCAGTGAAACGGATGATTT
TCTTCGTAACAACAACAGCAACAACAATAATTGTGATTTTGAAAACTTGG
AATCTCACCACCAACAACGGAAACGTAGACAGATCAATGAAAACACATTC
GAAAAATCGTCGTCCAACACACCAAATGATTCTCTGCACGATCCACCAAT
GGCGACAAGTGAACCTATTTCACCACTGGATACAAATATACTTCATTTAC
GAACTGATCGTCAGAAAGAGACTTCAAAACTACACCGGCCCTTCATTGGA
TCAATTACGCGAAGAACTTCAGAACTCGTGCATGACCAGAAGAGCACTAA
TGAGGAAAGAAATGAAACCCCTTCGAGTATCGAACAATTGCCTCGACACA
TCTCTATGTACGATACATCTCAAGATGATATCGATGACCAAAGTAAAGAT
AATGATGACGATTTGAATGTCTCGCAAACCGATTCTGACATGCTGGTAGA
AGTCGCATCTGTATGTGTCATCAGTAGTTCAGATGAGAGCGGAGACAATG
ATGGGAATCTGCTTCAAAGTCACCAAAAAGGATCAAGAGGTAGAAAATGG
TCAATCTCACGTGAAGCAGGATCTAAACAACTAAGTGATGACATAAATAG
TGTGTCACAATTTCTATCAACGGAAGATTTTAGTTTTGACCACAGACGTA
CTATTATCGGGGAAATGCCAATTCCAGAAGAGGAGATCAATAACAATCAA
ATTGATTCACCATTTGCCAGAGATGGGAAGATTACACTCAAAGAGTACCA
ACGAAGACGTCAAAATTATCTCGCCATGACCGAGAAGCCTTTAACACTAG
AACATACTGATATTAATCAGAATGACCAAGAAATTTCTAGATTGTCTCCA
GAAATCAGTAATATTTCCCAAATTAAACTCGGCGAAAAAACAAAAGTTAC
AGAAAGCTTTATTCAAGATAATATTGATGACCAGCCAAGTAGCCAAAACG
AGAACATTAGAAATCCTGGAACTAGCTTTGAGCAACAAAGTGATGATGAG
AGCTTGAAATCCAATAAAAGTTCCTTCAAAGAAAGCAGTTCCTCTGATGA
TGAAGATTCTAGCTCTTCTAGCAGTAGTGGTGAAAGTAGCTCCAGCGATG
AAAGCTCTTCTGAGGGTCTCTCTGAACATGACGAAACAAGCTCTCAAATA
GAAAGCCAAGATTGTGAAAATGTTGATTTTGACCTGATTGAATCAAAATT
CGAAGTCTTGACTCCTGTCTGTAGTGTTTACCGATGGAATATATCAGAGT
TTAGTAGTAAGCTGTTCCGCAGTGATTTAAAGGTGTTTTCAAAACCGTTC
AAAGTGCGTGATATCGATAATTCAAATACGTTTGAATTAAAAATTACCTG
GTTTAGTGAACTGAATGACGGTCTATCTATCGAGCTACTGGAAAATGGAA
TTAATCCAAGAATCGAAATGAATGTGATTCTGACTTGTGAAGGGAATGGT
TATTTTAATAGTCAAACTCTGATTGCCAATTCGAAACAGGATAAAGCATT
TCTACATATTAACCATGTTAATGTTGCGACATCGGAATTTTGCAACTCAA
AATCAGTCATGGATTTTATTGAAAACGATACACTTTTCATAAACTGCTAT
TTTGAGTTTTGCTAAAACTCGTGCATGACCAGAAGAGCACTAATGAGGAA
AGAAATGAAACCCCTTCGAGTATCGAACAATTGCCTCGACACATCTCTAT
GTACGATACATCTCAAGATGATATCGATGACCAAAGTAAAGATAATGATG
ACGATTTGAATGTCTCGCAAACCGATTCTGACATGCTGGTAGAAGTCGCA
TCTGTATGTGTCATCAGTAGTTCAGATGAGAGCGGAGACAATGATGGGAA
TCTGCTTCAAAGTCACCAAAAAGGATCAAGAGGTAGAAAATGGTCAATCT
CACGTGAAGCAGGATCTAAACAACTAAGTGATGACATAAATAGTGTGTCA
CAATTTCTATCAACGGAAGATTTTAGTTTTGACCACAGACGTACTATTAT
CGGGGAAATGCCAATTCCAGAAGAGGAGATCAATAACAATCAAATTGATT
CACCATTTGCCAGAGATGGGAAGATTACACTCAAAGAGTACCAACGAAGA
CGTCAAAATTATCTCGCCATGACCGAGAAGCCTTTAACACTAGAACATAC
TGATATTAATCAGAATGACCAAGAAATTTCTAGATTGTCTCCAGAAATCA
GTAATATTTCCCAAATTAAACTCGGCGAAAAAACAAAAGTTACAGAAAGC
TTTATTCAAGATAATATTGATGACCAGCCAAGTAGCCAAAACGAGAACAT
TAGAAATCCTGGAACTAGCTTTGAGCAACAAAGTGATGATGAGAGCTTGA
AATCCAATAAAAGTTCCTTCAAAGAAAGCAGTTCCTCTGATGATGAAGAT
TCTAGCTCTTCTAGCAGTAGTGGTGAAAGTAGCTCCAGCGATGAAAGCTC
TTCTGAGGGTCTCTCTGAACATGACGAAACAAGCTCTCAAATAGAAAGCC
AAGATTGTGAAAATGTTGATTTTGACCTGATTGAATCAAAATTCGAAGTC
TTGACTCCTGTCTGTAGTGTTTACCGATGGAATATATCAGAGTTTAGTAG
TAAGCTGTTCCGCAGTGATTTAAAGGTGTTTTCAAAACCGTTCAAAGTGC
GTGATATCGATAATTCAAATACGTTTGAATTAAAAATTACCTGGTTTAGT
GAACTGAATGACGGTCTATCTATCGAGCTACTGGAAAATGGAATTAATCC
AAGAATCGAAATGAATGTGATTCTGACTTGTGAAGGGAATGGTTATTTTA
ATAGTCAAACTCTGATTGCCAATTCGAAACAGGATAAAGCATTTCTACAT
ATTAACCATGTTAATGTTGCGACATCGGAATTTTGCAACTCAAAATCAGT
CATGGATTTTATTGAAAACGATACACTTTTCATAAACTGCTATTTTGAGT
TTTGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000395_pilon | genome | sc0000395_pilon:224502..229161 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-1929:1342 |
| Aaloc | 70-585:2509 |
| Aaloc | 46-69:3860 |
| Aaloc | 1-42:4661 |
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