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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:11375..13000+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004156 ID=XLOC_004156|Name=XLOC_004156|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1626bp|location=Sequence derived from alignment at sc0000043_pilon:11375..13000+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAACAGTCACAACAATGACGAAAGAATATCGTGCCTTTCTATATGAGAT
TGTCACGCCCATCTTGGCGGCTGGAATAGTGGTCCTAAACATTTTAGAAA
TGTTTCTCATTCGAAAGCAGAAAGGACGAAAAGGTAAgttataaaaatgt
tttataaTAGTCCAAATGTTGTGACAAAACTTAAAAGGGTTTTTGGTGAG
AAGATAGTAGGCGCTGAACTTTATCAACCAttgaccaagctatatccacc
atctttgatcagagttttcaGAATGGTAACACCACTTAAGTTAGTGAGTC
TCTTTATCTGGTGGATGTCAGTGGATCCGGAAGTAAGGGAGTCCTTTACT
ATTTGCACTAGACCTGGGAGATTGAATACTGAGGTGGAGCACCACACCTA
cactcagctcccagtaacttaccgacCAGATAAGACTAATCAATCTAAAG
CTACTAATTCGCTATGAACGATAATTTGACGTATTCTTGATACGATATTG
ATTCAATTTTTAACTTATTCTTTTGAAGGTGTTGGAAGTGTTTACATCGT
CAATCTCTGTACATCCGATATTTTTGTCGGTATTGCAATGATCATACTCA
AAATCATGACACAATTCCAAAAAACAACACTCAAAGATGATGAAGTCGCA
AAGGAGTTCTACAACATTATCCGATATTGTGTAATCCGCATCTCACTCTT
CGTCTCCGTTTTCAACCTATCCGCTTTAACCATTGACCGGCTTTTTGCCA
TCAAATTTCCATTTATCCACCGGAAACAAGGGAAGAAATTCGCATTCAAA
ATCTGTATCGGCGTCTGGGCTCTTAGCGTCGTTTTATGTAGTATCGTGTA
TTGCGTCACACGGTTTTATCTTAACAACATCGGCCGTTACAACAATTTGG
TTTTCCCGATCGCAACATATTCAGCTTCAATCATCTTTATCATTTCATAC
ACAATAATTTTCATTGAGATGCGAAAGAGCTCCAAGAATGTGGGGGCTGG
GTCGAGGAAGGGAACAAAAGCTGCGTCGGAGCAGGATAAAGCAGAGGTAA
CAGCtgactttttacttttttatctaACTGTTCGTCTCCACCACAGGAAA
AACAGGAAGATTCTTCCTGAGAAATTTTCTGAAATGGGCAAATGCATCTT
CATGAATGTTTTCGTACTAATTGTTGTGAGGTTTTTTCCCCTCTGTTTAA
ATAGCTTGACATTCACGCTTAAATGTTTTCGCTAATCATCCTACATCTTA
GATTCTTCTCAAAGAGGCaaaaaaTTACTTATTTAAAATTGTTATTTAGT
ACCGTTTCCTGAAACTGGCTATCAAGACTGTCACCGTCTTCATGATCTGC
TGGATTCCTTTCTCAACCTGTAGTCTACACATGGCCATCACTGGCACGTG
TGGCGGGCGAAGCGTCGAATATTCTCTCTTCACGCTGGCCTACATGAATT
CTGTGATCAATCCATTCATCTATTTGACGCATGCACAGAAAGCGATTTCC
CAAAAGATGAacaaaatgattcaatttttcattccaAAGAAAGAAGAAAC
GATTGAAAAGAATTTGAGTAGTGCTGTTACTAAGGATACCACGGTTGCTA
TGGCTACAGGAAATGAGGCTGCTTAA Coding sequence (CDS) from alignment at sc0000043_pilon:11375..13000+ >XLOC_004156 ID=XLOC_004156|Name=XLOC_004156|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1956bp|location=Sequence derived from alignment at sc0000043_pilon:11375..13000+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAACAGTCACAACAATGACGAAAGAATATCGTGCCTTTCTATATGAGAT
TGTCACGCCCATCTTGGCGGCTGGAATAGTGGTCCTAAACATTTTAGAAA
TGTTTCTCATTCGAAAGCAGAAAGGACGAAAAGGGAACAGTCACAACAAT
GACGAAAGAATATCGTGCCTTTCTATATGAGATTGTCACGCCCATCTTGG
CGGCTGGAATAGTGGTCCTAAACATTTTAGAAATGTTTCTCATTCGAAAG
CAGAAAGGACGAAAAGGTGTTGGAAGTGTTTACATCGTCAATCTCTGTAC
ATCCGATATTTTTGTCGGTATTGCAATGATCATACTCAAAATCATGACAC
AATTCCAAAAAACAACACTCAAAGATGATGAAGTCGCAAAGGAGTTCTAC
AACATTATCCGATATTGTGTAATCCGCATCTCACTCTTCGTCTCCGTTTT
CAACCTATCCGCTTTAACCATTGACCGGCTTTTTGCCATCAAATTTCCAT
TTATCCACCGGAAACAAGGGAAGAAATTCGCATTCAAAATCTGTATCGGC
GTCTGGGCTCTTAGCGTCGTTTTATGTAGTATCGTGTATTGCGTCACACG
GTTTTATCTTAACAACATCGGCCGTTACAACAATTTGGTTTTCCCGATCG
CAACATATTCAGCTTCAATCATCTTTATCATTTCATACACAATAATTTTC
ATTGAGATGCGAAAGAGCTCCAAGAATGTGGGGGCTGGGTCGAGGAAGGG
AACAAAAGCTGCGTCGGAGCAGGATAAAGCAGAGGTGTTGGAAGTGTTTA
CATCGTCAATCTCTGTACATCCGATATTTTTGTCGGTATTGCAATGATCA
TACTCAAAATCATGACACAATTCCAAAAAACAACACTCAAAGATGATGAA
GTCGCAAAGGAGTTCTACAACATTATCCGATATTGTGTAATCCGCATCTC
ACTCTTCGTCTCCGTTTTCAACCTATCCGCTTTAACCATTGACCGGCTTT
TTGCCATCAAATTTCCATTTATCCACCGGAAACAAGGGAAGAAATTCGCA
TTCAAAATCTGTATCGGCGTCTGGGCTCTTAGCGTCGTTTTATGTAGTAT
CGTGTATTGCGTCACACGGTTTTATCTTAACAACATCGGCCGTTACAACA
ATTTGGTTTTCCCGATCGCAACATATTCAGCTTCAATCATCTTTATCATT
TCATACACAATAATTTTCATTGAGATGCGAAAGAGCTCCAAGAATGTGGG
GGCTGGGTCGAGGAAGGGAACAAAAGCTGCGTCGGAGCAGGATAAAGCAG
AGTACCGTTTCCTGAAACTGGCTATCAAGACTGTCACCGTCTTCATGATC
TGCTGGATTCCTTTCTCAACCTGTAGTCTACACATGGCCATCACTGGCAC
GTGTGGCGGGCGAAGCGTCGAATATTCTCTCTTCACGCTGGCCTACATGA
ATTCTGTGATCAATCCATTCATCTATTTGACGCATGCACAGAAAGCGATT
TCCCAAAAGATGAacaaaatgattcaatttttcattccaAAGAAAGAAGA
AACGATTGAAAAGAATTTGAGTAGTGCTGTTACTAAGGATACCACGGTTG
CTATGGCTACAGGAAATGAGGCTGCTTAATACCGTTTCCTGAAACTGGCT
ATCAAGACTGTCACCGTCTTCATGATCTGCTGGATTCCTTTCTCAACCTG
TAGTCTACACATGGCCATCACTGGCACGTGTGGCGGGCGAAGCGTCGAAT
ATTCTCTCTTCACGCTGGCCTACATGAATTCTGTGATCAATCCATTCATC
TATTTGACGCATGCACAGAAAGCGATTTCCCAAAAGATGAacaaaatgat
tcaatttttcattccaAAGAAAGAAGAAACGATTGAAAAGAATTTGAGTA
GTGCTGTTACTAAGGATACCACGGTTGCTATGGCTACAGGAAATGAGGCT
GCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:11375..13000 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 661-987:1300 |
| Aaloc | 145-660:531 |
| Aaloc | 10-141:1 |
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