|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000380_pilon:143412..145421+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_003327 ID=XLOC_003327|Name=XLOC_003327|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2010bp|location=Sequence derived from alignment at sc0000380_pilon:143412..145421+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGCAAATCCTACCACCGTGTCAAGAATGCGTACTAAATGCAAATG
TGGGTACAGTTTTTGCCTGCTACTCCTTTTAGCTTTATATTCAACGTTAA
TCCAGTtaccaaatctccgggaaatATTTTCCCGAAAACACGGCAACATC
ACACACGTCATCGGAACAACTTTGCATAAATCGAAAGAACTTCTCGAGAG
CAGGTATGGAGAATTTCAAAGTTGGAGTAAAGAGCTCATAAACGGTGAAA
CAAATAGTCACGTGACACGCTATGAGCCAATCAAATGTGGTGTTAAGAGT
AAACCGCACCGCTCAATTTTCTACGTCAGAACACACCGTGCCGCTTCGAC
AACCTTGAGAAATATGTTACTGATTTATGGGAGAGAATACAATTTGACTA
TCTGTATGGACGTACTGGACCTCCATCGGGCGAACTGGCCCTATGGAGTC
GATGTATCTCGACTGACGAAAACTAGTAATGAAAGATGCCAGCTGGTAGC
AGAGGAAATTATGTACTCAAGTAAATTAGGTAATATTATCAAGGATTAAT
TAGTTTGATTGTGAATCAAATAAAGATTTATGTTGAAAAATGCGAGGAGG
GGTGAATGGGGGGATGTTGTCAAAGAACACAAATACAAAAGGTATTAGGT
CGTTATTGAACCAAAGATTCATTGAAGCCGTGCATTGTAACCCAAGTTAA
ATAAAAACCCATCACCCACCACTTAAGTTAATTTTACCAGAACAATCCTG
TGTTTTTGGAGAGttgatgaagtcacgaaagatgacTCATTACAAGCAGT
CGCTTCATATCttttttttatacttgctgcttttacttttacgttttgat
tttttggaataTAATTAACGGGGGATTGACCAACTTACCAGATTAGAGAC
TTTACTTGAAAGCCTTAAAAAAGGTTAGAAGTAGACTAAAATTAGGACTA
ATAAAGTAAGGCGGCAAACTCTTTATAGCTCTACTAACTCCCGGGGGTCA
GaaaaaaaGGATAATTCATCTTCGAGTACACgcgttttttacaagaatgt
tGTTTCTCCATTTATTCATCTCCGTTAATTCTTAACTTTTAGGGAAAAAT
CACCCTAAAATATTCTGGCGGTATGTCCAATGTTAAAGTGAATATTCTTA
AACAGTacattcttatataaaacgGGTTGTTCCCCGATGGTGCCTGATCT
CTTCtacattttcttctttcatattttactttttcagttGACAAAATCAT
GGCGGAGAAGGTTTTCACTTTAACTTCTGTTCGTCAtccagtccaacatt
tcattTCGTTGTTCCGACAGATGAAAATACAAGAGGTTGTGCAACGCGTT
ACAAGTCGCAAAGGGTTGACAGAGAATCAAGCTATGGAGATATTTCTTAA
AGATTGGGAAGACTTTCAAAGAGCATACGCAACAGATGAAAACATAGGGA
TTGGTGAAAAGTTACATTTAGGAATGATCAGATTAAATTTACAATCGTTT
AGCCTGGGAATAACAGATGTGATGTCTTTAGAGGATGTAGTACACAGGCT
AAATGAGATGAACCTTATAGTTGTTTTTGAACGATTTGATGAATCAATGG
tcattttgagagaaaagcTATGTTGCTCTTTAGATGATGTAGCGTACCGA
AAGCTACAGAATCATGAAACATCAAGCACAGTCTACGTACCAGAGGAACT
TCAAAGACTCATcataaatttcaataaaatagatgCTATTTTCTATCAGC
ATGCAGTTAAACGGCTAGACGAAGAGATGTCAGCGTTTGACAATTTTGAA
CAACTTTTAGGGATTTATCGAGCAGAACTAAAGAAGTTCGAAGCTAAATG
TACGGACCCGAATTTCCCAGCACAATTTAGGAACAAAATATGTCCACCTG
TTGAAGGGGATCAGGTAGAGACATTTGTAAACGACGTGCGAAAGGAACAA
AAACTGATTTTATTAGATAAATTGAGGCGCCGTTTTAGTAAGAAACATTT
ACATTCATag Coding sequence (CDS) from alignment at sc0000380_pilon:143412..145421+ >XLOC_003327 ID=XLOC_003327|Name=XLOC_003327|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2604bp|location=Sequence derived from alignment at sc0000380_pilon:143412..145421+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGCAAATCCTACCACCGTGTCAAGAATGCGTACTAAATGCAAATG
TGGGTACAGTTTTTGCCTGCTACTCCTTTTAGCTTTATATTCAACGTTAA
TCCAGTtaccaaatctccgggaaatATTTTCCCGAAAACACGGCAACATC
ACACACGTCATCGGAACAACTTTGCATAAATCGAAAGAACTTCTCGAGAG
CAGGTATGGAGAATTTCAAAGTTGGAGTAAAGAGCTCATAAACGGTGAAA
CAAATAGTCACGTGACACGCTATGAGCCAATCAAATGTGGTGTTAAGAGT
AAACCGCACCGCTCAATTTTCTACGTCAGAACACACCGTGCCGCTTCGAC
AACCTTGAGAAATATGTTACTGATTTATGGGAGAGAATACAATTTGACTA
TCTGTATGGACGTACTGGACCTCCATCGGGCGAACTGGCCCTATGGAGTC
GATGTATCTCGACTGACGAAAACTAGTAATGAAAGATGCCAGCTGGTAGC
AGAGGAAATTATGTACTCAAGTAAATTAGATGAGAGCAAATCCTACCACC
GTGTCAAGAATGCGTACTAAATGCAAATGTGGGTACAGTTTTTGCCTGCT
ACTCCTTTTAGCTTTATATTCAACGTTAATCCAGTtaccaaatctccggg
aaatATTTTCCCGAAAACACGGCAACATCACACACGTCATCGGAACAACT
TTGCATAAATCGAAAGAACTTCTCGAGAGCAGGTATGGAGAATTTCAAAG
TTGGAGTAAAGAGCTCATAAACGGTGAAACAAATAGTCACGTGACACGCT
ATGAGCCAATCAAATGTGGTGTTAAGAGTAAACCGCACCGCTCAATTTTC
TACGTCAGAACACACCGTGCCGCTTCGACAACCTTGAGAAATATGTTACT
GATTTATGGGAGAGAATACAATTTGACTATCTGTATGGACGTACTGGACC
TCCATCGGGCGAACTGGCCCTATGGAGTCGATGTATCTCGACTGACGAAA
ACTAGTAATGAAAGATGCCAGCTGGTAGCAGAGGAAATTATGTACTCAAG
TAAATTAGttGACAAAATCATGGCGGAGAAGGTTTTCACTTTAACTTCTG
TTCGTCAtccagtccaacatttcattTCGTTGTTCCGACAGATGAAAATA
CAAGAGGTTGTGCAACGCGTTACAAGTCGCAAAGGGTTGACAGAGAATCA
AGCTATGGAGATATTTCTTAAAGATTGGGAAGACTTTCAAAGAGCATACG
CAACAGATGAAAACATAGGGATTGGTGAAAAGTTACATTTAGGAATGATC
AGATTAAATTTACAATCGTTTAGCCTGGGAATAACAGATGTGATGTCTTT
AGAGGATGTAGTACACAGGCTAAATGAGATGAACCTTATAGTTGTTTTTG
AACGATTTGATGAATCAATGGtcattttgagagaaaagcTATGTTGCTCT
TTAGATGATGTAGCGTACCGAAAGCTACAGAATCATGAAACATCAAGCAC
AGTCTACGTACCAGAGGAACTTCAAAGACTCATcataaatttcaataaaa
tagatgCTATTTTCTATCAGCATGCAGTTAAACGGCTAGACGAAGAGATG
TCAGCGTTTGACAATTTTGAACAACTTTTAGGGATTTATCGAGCAGAACT
AAAGAAGTTCGAAGCTAAATGTACGGACCCGAATTTCCCAGCACAATTTA
GGAACAAAATATGTCCACCTGTTGAAGGGGATCAGGTAGAGACATTTGTA
AACGACGTGCGAAAGGAACAAAAACTGATTTTATTAGATAAATTGAGGCG
CCGTTTTAGTAAGAAACATTTACATTCATagttGACAAAATCATGGCGGA
GAAGGTTTTCACTTTAACTTCTGTTCGTCAtccagtccaacatttcattT
CGTTGTTCCGACAGATGAAAATACAAGAGGTTGTGCAACGCGTTACAAGT
CGCAAAGGGTTGACAGAGAATCAAGCTATGGAGATATTTCTTAAAGATTG
GGAAGACTTTCAAAGAGCATACGCAACAGATGAAAACATAGGGATTGGTG
AAAAGTTACATTTAGGAATGATCAGATTAAATTTACAATCGTTTAGCCTG
GGAATAACAGATGTGATGTCTTTAGAGGATGTAGTACACAGGCTAAATGA
GATGAACCTTATAGTTGTTTTTGAACGATTTGATGAATCAATGGtcattt
tgagagaaaagcTATGTTGCTCTTTAGATGATGTAGCGTACCGAAAGCTA
CAGAATCATGAAACATCAAGCACAGTCTACGTACCAGAGGAACTTCAAAG
ACTCATcataaatttcaataaaatagatgCTATTTTCTATCAGCATGCAG
TTAAACGGCTAGACGAAGAGATGTCAGCGTTTGACAATTTTGAACAACTT
TTAGGGATTTATCGAGCAGAACTAAAGAAGTTCGAAGCTAAATGTACGGA
CCCGAATTTCCCAGCACAATTTAGGAACAAAATATGTCCACCTGTTGAAG
GGGATCAGGTAGAGACATTTGTAAACGACGTGCGAAAGGAACAAAAACTG
ATTTTATTAGATAAATTGAGGCGCCGTTTTAGTAAGAAACATTTACATTC
ATag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380_pilon | genome | sc0000380_pilon:143412..145421 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 532-1302:1240 |
| Aaloc | 1-528:1 |
|
