|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000221_pilon:542700..546994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002769 ID=XLOC_002769|Name=XLOC_002769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4295bp|location=Sequence derived from alignment at sc0000221_pilon:542700..546994- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTCTGGTAACTTTGTGTTTCTTTGCTGTCTTCAGCTACAATGT
CGCTTTACCAGCGACAACCACCGCTCACAAAGCAAAATCGACTATTCCTG
TAATTACGACGACGGTTGCTGCTCCTACTGAACCTGAAACCACGACTGCT
GCCCCTACCACTACAGCTGCTGCTCCAACCACCACGGCTGCTGCCCCTAA
AACGACAACTGCTGCCCCTACCACTACAGCTGCTGCTCCTACCAACACAA
CTGCTGCCCCTAAAACGACAACTGCTGCCCCTAAAACGACAACTGCTGCC
CCTACCACTACGGCTGCTGCCCCTGAAACGACAGCTGCTGCTCCTACCAA
CACAACTACTGCCCCAACCACCACAACTACCGCCCCAACCACGACGACAA
CGACTCCTACACCGACAATCAATCGTAAGTCCTATTGTTTATTTTATCTG
CTAAATAGAAATGTCCGCCTTTTAGAAACTTTTCAATTCTGTGCTCTAAT
CTTAGGTACTATTAAGGGTTTCAAGTATGTAAAATTTTGGTCCGAATTGC
TTTTCTAGAGACACTAGGACATGGAAGAACAAGAGAATGATTATTTAAAT
GCAACAATTTAGTTTTATGAATCATAGTAGTCTTGAGGTCCATGTCATTT
TCATGATGTAAATAAATTCACGAATGGATAAAGGAAGCGCTCCAAACGTC
TATAAGCGATTTGTTCAATTAAACTTTCAAGAGTTTAAGAAATAGATAGT
TTGGATAAATCAATCCTATCTATTTCTTTTTAAGTCTATGTTATGATCAG
TTTGACCGTTGATGTCCCCTGATTAGAGAGGAAAAAAGTAGCGTTTTGGC
CATTTCGTGCAAAAAAACGGTCCGCTAATGTCCACCTTTTAGAAACTTTT
TTATGAGGATTTGACTAGGAAATGGCCGGGGAAAATAGAATTGTCCACCA
CTAGTCAAAGGTGTCCGCCAACTTACGCTTATAGCATTTTTAAGCTTCCC
TATTTTCTCATCGATATCCTAAGTTCCCTTTCTTAATTCCTTGGTAAATT
CGGCTGATGGTTGCTATTTAGTTGCCATTAATTTCATTTGTTGGATTCAT
CTAGGTCGATTCTTGATGATTTACATGAGATGAATAATTTTGGTTGGTTT
TCTTGTATATTGACTTATGGACGACTTATCAAGATACTTATTAAGAGAAG
AATTCATTTTCATAAAATTTTATTTTTTAACCTTCTTATATTTCTACTAC
CAATTTATTGCAGCATTTTGTATTGGTAAAGTCGAGTTCAACGCTGATCC
AAAGAATTGCAGTCAATTTATTAGATGTCCACGAACCGGTAAACTCAAAG
GTCACGCAGTGGTCTACCACTGTCCCCCTACTCTGGTCTTCAATGTTGCA
GGTGAATACTGTGATTGGCCTCGTAATGTCAAATGTAAGGACGGAATTCG
CCCAACAAAACGCCCAAGAACTACAACACCTCCTAAAGTTACGAAACCAG
CAACTACTGCCGCTGCTACAACCGAAGCTCCTACCACTACAGAGGCTCCT
ACCACCACTGCTAAAGCACCAACCACTACAACAAAGGCAGCTCCCACCAC
AACAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGACAACCACAG
CAGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACCACAGCC
GCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGC
AGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACGACCACAGCCGAAG
CCAAGAGACCGACAGCCGCAGCCAAAGAGACGACCACAGCCGCAGCCAAA
GAGACGACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGA
GACAACCACAGCAGCAGCCAAAGAGACAACCACAACCGCTCCAACTACTA
CAACCACCGCTACAACTACCACCTCTACAACCACCCCTGATCGTGAGTGA
AAATTTATTTTTCAAATGGCCCTCTTATCTATTAAGTCCGATCGGTTATA
TAGTGCTATGAAAATGCATATCAAAGTCGAACGAACTTCAACCGTGAAGT
TGACTCTTTGAGGCATCGAAAGTATGAAAAATCATAGGTATTAAGTTATC
ATTGCTTTGAAATTTCTTCCCATTTATATTATAGCATTTTGTATTGGAAA
ACCTGAACGAAACATTTTCCCTGGAAGTTGCCACAAATATATTACTTGTA
TCGATGGTAAAAAAGGAGTGGTCAATTGCTGGTGGTTCAAGTATGACCCA
ACCCTCAAGAAATGTGTTAATCCACGTAGTGTTTTGTGTAAAGATGGCGA
ATTCTGTAAGTTGTAAAAATAATTAAAATCTCTAACCAACAAATTGCAGA
AGAGTCTAGAAAAGTAAGAGATTGACGTTACCATATTCTACTTCTATAAC
TACAGAACTACAAAACAGGTTTTGATCTTGTTCTTGTGGGGAATCAAATA
AGAATATAATGTCTAGTCATAAGAAAGTAACATAAATTAAACTTCTGAAG
GATACAGTATGAGCAAACCTCACATCTTTTTCTGAGGGATGGTGAGTTGA
CTTTTAAATATTATTATTACTAAAACTTTTGAAAAATATAAATTCTTGAT
TTCCTTTATGAGAACGGTTATTAACCTAATCAACCCAAAGCCAATTAGTT
GCATTCTTTACGTTCATTCTTCTTTACTTTGTAGTCACGACAACAACTAC
AACTACAACAACGACAACGACCACCCCTTTCACTGGTTCCACCATCCCCA
CAACTAGGCCCACGACCACCAAAAGTATGTTTCTCCTTTTCAATTCTTTT
TGGTTAATTCTATCCATTGGATTTACAGCCCATCGTTATTAAGGCTGAAT
TTTTTGCTTAGTGTTGTCTTTTTTTGTTATTTGTCTTAAACTCTTCACTT
GAATAGAATGATGTGATCGATGAGAAATTTTGAGAAACCCACCAAAATGA
CATTCGGAAATATCGGTACCTTTGAGCGATACCTATTATAATATATATAT
ATATTTCCCTGTTTTAGGTGTTTGCGCAAAGAGCGGTGAATATTACATTC
GCGATGCAAAAGATTGCAGCAAATTTATCCATTGTCAAGGCTCCCGACCA
ACGTTCAAGACATGTCCTGGTGTCCTTGTTTTCGATGTAGAGAAGAATGT
TTGTAATTGGCGTTTCGCAGTCGACTGTGGTGATGGTAAGATATTACAGA
AAATACACCACTGTATCTTTTGTTACATCCACCACCATTATCTGACTGTT
CAATATTAATAGATTATTGCAACCACACCTTCTGTTAGGAACAGTATCTA
TGACAGGAGACTGAGATGACCATAATTTAGGCCATTTAGGCAGAATTGAA
AAGTGAGAAATTAAAATTACAAAGACAATACTAATTTTAAATCTCTTAAA
TCCTTTTCATAGATAAACTATAAAGAAAACATATGGAACATTTAAGCCAA
CAAATCACTATAGGGTAAGGACAACCGTAGGTCAAGCCAAATTTTAATTG
CTTTCATTCATCGTATAGCAACAACTGCCGCCCCAGCCACGACCACCACA
AAAGCCCCTGCAACAACACGAAAACTAGAAACAACAGTTGCTGCACCTGA
AACTACAACCAAAGCTCCCGCAACTACGCAGAAAGCACCAAGAACCACTA
CAGTCGCTGCACCTGAAACGACAACCGTTGCTGCACCTGCAACCACGACA
GCTGCTGCACCTGAAACTACTACCAAAGCACCAAAGACTACAACTGCTGC
ACCCAAAACCACTACAGTTGCTGCACCAGAAACCACTACCACAGTAGCTG
CACCCGAGACAACAGTGAAAATTGTCACAACAAAAGCAAAACCCACAACA
ACAGAAGCTCAATGTAAGTGGAAGGGACTTTAACATCATATTTTTTTCTT
GTTCGATTTATTCATTCCTTCGTGTGATTTTTGAAACTTTAAACGATTTT
TAGTAGGGTAGGGAATTCCATTAAAAACAGTCGCTAGAAATCTTGATAAT
AATGTTCTTCATGTTCTTCTTCGTTATTAACTTATACATGTTTTTTACAA
AATTGTTTATCATTACTTTTTTTAGCACTTTGCAAAGGCAAGAGCGGCCC
TGTTCCACACCCAAAAGATTGTACAAAATATTTCCAATGTGTCCATGGAC
GAAGTTACGATCGATCGTGTCCAAAAGGATTACATTTCGATAAAAAGAAC
GGATACTGTAATTGGCCAGCTGCAGCAAAATGCTCTACACATTAA Coding sequence (CDS) from alignment at sc0000221_pilon:542700..546994- >XLOC_002769 ID=XLOC_002769|Name=XLOC_002769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4104bp|location=Sequence derived from alignment at sc0000221_pilon:542700..546994- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTCTGGTAACTTTGTGTTTCTTTGCTGTCTTCAGCTACAATGT
CGCTTTACCAGCGACAACCACCGCTCACAAAGCAAAATCGACTATTCCTG
TAATTACGACGACGGTTGCTGCTCCTACTGAACCTGAAACCACGACTGCT
GCCCCTACCACTACAGCTGCTGCTCCAACCACCACGGCTGCTGCCCCTAA
AACGACAACTGCTGCCCCTACCACTACAGCTGCTGCTCCTACCAACACAA
CTGCTGCCCCTAAAACGACAACTGCTGCCCCTAAAACGACAACTGCTGCC
CCTACCACTACGGCTGCTGCCCCTGAAACGACAGCTGCTGCTCCTACCAA
CACAACTACTGCCCCAACCACCACAACTACCGCCCCAACCACGACGACAA
CGACTCCTACACCGACAATCAATCATGAAGCTTCTGGTAACTTTGTGTTT
CTTTGCTGTCTTCAGCTACAATGTCGCTTTACCAGCGACAACCACCGCTC
ACAAAGCAAAATCGACTATTCCTGTAATTACGACGACGGTTGCTGCTCCT
ACTGAACCTGAAACCACGACTGCTGCCCCTACCACTACAGCTGCTGCTCC
AACCACCACGGCTGCTGCCCCTAAAACGACAACTGCTGCCCCTACCACTA
CAGCTGCTGCTCCTACCAACACAACTGCTGCCCCTAAAACGACAACTGCT
GCCCCTAAAACGACAACTGCTGCCCCTACCACTACGGCTGCTGCCCCTGA
AACGACAGCTGCTGCTCCTACCAACACAACTACTGCCCCAACCACCACAA
CTACCGCCCCAACCACGACGACAACGACTCCTACACCGACAATCAATCCA
TTTTGTATTGGTAAAGTCGAGTTCAACGCTGATCCAAAGAATTGCAGTCA
ATTTATTAGATGTCCACGAACCGGTAAACTCAAAGGTCACGCAGTGGTCT
ACCACTGTCCCCCTACTCTGGTCTTCAATGTTGCAGGTGAATACTGTGAT
TGGCCTCGTAATGTCAAATGTAAGGACGGAATTCGCCCAACAAAACGCCC
AAGAACTACAACACCTCCTAAAGTTACGAAACCAGCAACTACTGCCGCTG
CTACAACCGAAGCTCCTACCACTACAGAGGCTCCTACCACCACTGCTAAA
GCACCAACCACTACAACAAAGGCAGCTCCCACCACAACAGCAGCCAAAGA
GACAACCACAGCAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGA
CAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACA
ACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAAC
CACAGCCGCAGCATTTTGTATTGGTAAAGTCGAGTTCAACGCTGATCCAA
AGAATTGCAGTCAATTTATTAGATGTCCACGAACCGGTAAACTCAAAGGT
CACGCAGTGGTCTACCACTGTCCCCCTACTCTGGTCTTCAATGTTGCAGG
TGAATACTGTGATTGGCCTCGTAATGTCAAATGTAAGGACGGAATTCGCC
CAACAAAACGCCCAAGAACTACAACACCTCCTAAAGTTACGAAACCAGCA
ACTACTGCCGCTGCTACAACCGAAGCTCCTACCACTACAGAGGCTCCTAC
CACCACTGCTAAAGCACCAACCACTACAACAAAGGCAGCTCCCACCACAA
CAGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGACAACCACAGCA
GCAGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGC
AGCCAAAGAGACAACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAG
CCAAAGAGACAACCACAGCCGCAGCCAAAGAGACGACCACAGCCGCAGCC
AAAGAGACGACCACAGCCGCAGCCAAAGAGACAACCACAGCCGCAGCCAA
AGAGACAACCACAGCAGCAGCCAAAGAGACAACCACAACCGCTCCAACTA
CTACAACCACCGCTACAACTACCACCTCTACAACCACCCCTGATCCCAAA
GAGACGACCACAGCCGCAGCCAAAGAGACGACCACAGCCGCAGCCAAAGA
GACAACCACAGCCGCAGCCAAAGAGACAACCACAGCAGCAGCCAAAGAGA
CAACCACAACCGCTCCAACTACTACAACCACCGCTACAACTACCACCTCT
ACAACCACCCCTGATCCATTTTGTATTGGAAAACCTGAACGAAACATTTT
CCCTGGAAGTTGCCACAAATATATTACTTGTATCGATGGTAAAAAAGGAG
TGGTCAATTGCTGGTGGTTCAAGTATGACCCAACCCTCAAGAAATGTGTT
AATCCACGTAGTGTTTTGTGTAAAGATGGCGAATTCTCATTTTGTATTGG
AAAACCTGAACGAAACATTTTCCCTGGAAGTTGCCACAAATATATTACTT
GTATCGATGGTAAAAAAGGAGTGGTCAATTGCTGGTGGTTCAAGTATGAC
CCAACCCTCAAGAAATGTGTTAATCCACGTAGTGTTTTGTGTAAAGATGG
CGAATTCTTCACGACAACAACTACAACTACAACAACGACAACGACCACCC
CTTTCACTGGTTCCACCATCCCCACAACTAGGCCCACGACCACCAAAATC
ACGACAACAACTACAACTACAACAACGACAACGACCACCCCTTTCACTGG
TTCCACCATCCCCACAACTAGGCCCACGACCACCAAAAGTGTTTGCGCAA
AGAGCGGTGAATATTACATTCGCGATGCAAAAGATTGCAGCAAATTTATC
CATTGTCAAGGCTCCCGACCAACGTTCAAGACATGTCCTGGTGTCCTTGT
TTTCGATGTAGAGAAGAATGTTTGTAATTGGCGTTTCGCAGTCGACTGTG
GTGATGGTGTTTGCGCAAAGAGCGGTGAATATTACATTCGCGATGCAAAA
GATTGCAGCAAATTTATCCATTGTCAAGGCTCCCGACCAACGTTCAAGAC
ATGTCCTGGTGTCCTTGTTTTCGATGTAGAGAAGAATGTTTGTAATTGGC
GTTTCGCAGTCGACTGTGGTGATGCAACAACTGCCGCCCCAGCCACGACC
ACCACAAAAGCCCCTGCAACAACACGAAAACTAGAAACAACAGTTGCTGC
ACCTGAAACTACAACCAAAGCTCCCGCAACTACGCAGAAAGCACCAAGAA
CCACTACAGTCGCTGCACCTGAAACGACAACCGTTGCTGCACCTGCAACC
ACGACAGCTGCTGCACCTGAAACTACTACCAAAGCACCAAAGACTACAAC
TGCTGCACCCAAAACCACTACAGTTGCTGCACCAGAAACCACTACCACAG
TAGCTGCACCCGAGACAACAGTGAAAATTGTCACAACAAAAGCAAAACCC
ACAACAACAGAAGCTCAATCAACAACTGCCGCCCCAGCCACGACCACCAC
AAAAGCCCCTGCAACAACACGAAAACTAGAAACAACAGTTGCTGCACCTG
AAACTACAACCAAAGCTCCCGCAACTACGCAGAAAGCACCAAGAACCACT
ACAGTCGCTGCACCTGAAACGACAACCGTTGCTGCACCTGCAACCACGAC
AGCTGCTGCACCTGAAACTACTACCAAAGCACCAAAGACTACAACTGCTG
CACCCAAAACCACTACAGTTGCTGCACCAGAAACCACTACCACAGTAGCT
GCACCCGAGACAACAGTGAAAATTGTCACAACAAAAGCAAAACCCACAAC
AACAGAAGCTCAATCACTTTGCAAAGGCAAGAGCGGCCCTGTTCCACACC
CAAAAGATTGTACAAAATATTTCCAATGTGTCCATGGACGAAGTTACGAT
CGATCGTGTCCAAAAGGATTACATTTCGATAAAAAGAACGGATACTGTAA
TTGGCCAGCTGCAGCAAAATGCTCTACACATTAACACTTTGCAAAGGCAA
GAGCGGCCCTGTTCCACACCCAAAAGATTGTACAAAATATTTCCAATGTG
TCCATGGACGAAGTTACGATCGATCGTGTCCAAAAGGATTACATTTCGAT
AAAAAGAACGGATACTGTAATTGGCCAGCTGCAGCAAAATGCTCTACACA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000221_pilon | genome | sc0000221_pilon:542700..546994 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1885-2052:169 |
| Aaloc | 1540-1881:726 |
| Aaloc | 1372-1536:1227 |
| Aaloc | 1282-1368:1560 |
| Aaloc | 1111-1278:2110 |
| Aaloc | 940-1107:2473 |
| Aaloc | 427-936:3031 |
| Aaloc | 1-423:4296 |
|
