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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000295_pilon:400645..404105+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002302 ID=XLOC_002302|Name=XLOC_002302|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3461bp|location=Sequence derived from alignment at sc0000295_pilon:400645..404105+ (Clytia hemisphaerica_ch_hm2_pilon) AAGAACATCAAACTCTCCCAATCCGATCTCAATACCGTCACTATGGTGAA
CAACTTACAAGTCCAGAAGACAAACCAAAGAAACATCTTGGCAGTTCTTC
AAAACAGAATCAAATCCTCGGTCACATATTCAACTGAACAAACGATTACT
GGATtgaacaaatttcaaaatgatgTCTATTTCAAGACATTGACTATAAA
TGGAAATGTATCCGTTGGCAATCTAACCAATGGAAAGGACCTCTCTAACG
TTTCCAGAGATGCAATCTACATTAACAAGGATGAAGTGTTCGAATCCCAA
ATAACCTTCACTAGCAATATCACATTTGATTCCATCTCTGTCCAACACAT
CAACAATATTTCGACAACCAAGCTTCGATCAATCAACAAAGCATCCAACA
TCTCTGGACAACAGACTTTCCAAGACTTCCAGACATCATCAGCCACTCAA
AACAACATTCAAGTCAATGGCTTAGTTGATGGTGTGGATACTTCAAAGCT
AGTGCTATTGGATACAGATCAAAACATTACTGCATTGCATCAATTTACAA
ACAAGACCACAATGCAACAGGATTTCCATATCCAGGGCCTGGTCAACAAT
ATGGACATTTCTACTATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGA
CACAGTCACTGCATATCAACGATTCTCCAGCATAGAAATCAAGGGAGATT
TGAACATGGCGGACAAGAAGACAATTAATGATGTGGATGTCTCCAATCTC
ACTTCCAGTGGAATCTATCTGAACGCCGTCCAGGAATTTGGCAACATCGT
ATTCCAAAACAACGTCACTTTCAATGACCAAATATCGCTTGGTGAAACAC
TCAACAACGTCACAATCGATGATTTGGTATTCACAGATCAAACAACTGTC
TTTCATCATCCAATCACATTCAAGCAAAATATCACATGTTCTGATCACGT
GACCGTGGATGGAAAAATCAACAACCTCAATATTACTGGTTAGTCTTAAT
TTAATAAGATACTTTAGATTTTCGTGTGATTATCTGTAATTATCTTAACC
CGTAGCGTAGATGCTTTAAAGTGCAGCACATTTTGTAAAATCACTCATTT
AAACTTTACTCTGcaaaagtttcattttcattcaaagAACAAACTTAATC
CATCACCATTGGAAAatttaaatatgttttttaGAAACGGGTTGTTTATA
ACATTCTTTTAATAGGAATATCTTTGAAATTAATATAGTCGGGCTTAAAA
GTAGACCAGTAACTGAAATCAATTACATTCTTATTATTCTAGAAGACATC
ATGGACGTTTCATCCAACCAAACCATTACTGGCAACACCATTTTCACCAA
GAATCTCCAAATGTCAAACAATCTTCAGGTCCATGATCATCTTGATGGAA
TTGACATCAATGCATTTATCAAGAACGTTATGACTTACAATACAACTCAA
AACGTAACTGCAACAAAATTCTTCAGTAACTTGACCACAGATTCGATATG
GTTCAACAACTGTACAGACCAACAATGTACCTGGTTAAACATCTTATTGA
AACTTAAGGAAGAATCAATCCATAAAACCAACGGACAGATATCTGTTAAT
GGAACTAAATCCTTCTCAGATGTTTTAATCCGTGGTAATCTCACTCTTAA
TGGTTTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCAGCGATCCA
TTGATGAAGTGATCAATGGTACCTACACTTTCAACAACGTCACATTCGTC
AAAAATATCACCGCTGATACGCTAAATGGTTACAATCTAACTGAACTCTA
CGAACGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCATCGCCAATT
GGTCTTTCAATGATCACACTCACTTTGATGAACTTCAAGTTGATGGGTTG
GTTGACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAATCAGGATCA
TGTAATTTCTGGGGAAAAGACTTTCCAAACGGTACCCACGCTAAACGTCT
ACTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGA
CTCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGACATCATTATC
AAAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAAC
GGTGGGATTGATCGACGGTGTcaacatttcaaaattgaatGATCAAGCTA
TGAAGCTGGATGAGGATCAAATTGTCACTGGAAAGAAGGTATGCACATTT
AgaattatcaaataaatttttgaaagagcCTGAAGAATTTCATGAGCGtt
ctttcttaattttcttaCAGCCATTCTTCGTAATCTTTATAAATGCTAAT
AGTGGTGTAGCTCGAAATGGTGCTTAAAATACATTTAGTTCATTCAGTGA
TTTCCTcacaattttcttttgatcacTTAAAGTAAAATCTCTGGCCCAAC
CTTCATACTCTGTTGAAAATTCCTTCTAACAATTGAACAAAAGATTCAAT
CAAAATTTGTTACATATATCGTGGGTCTACTCTTAGAAAAGTTTTCaccc
tttttcagattttccaagagAAGATTGAAGTCTCGATGGAGAATCTCAAA
GTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAACAATC
CATCAACAAGAACGAGCCTTCAGTTGTGATTCGACAAAACTCGACTATCC
AGAATCTAACAATCCGTGGTAACACATCCACCCATGCATTGAATGGATTG
AATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAAC
TATCCATGGTGATGTCTACATAAATGAGCTTGTTATCAATGGCGATCTCA
ATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTT
AGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTATCAC
AACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACAGAGT
TTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGGCAAG
AAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATAGTTT
AATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTGAAGC
AAGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGATTCTA
CAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTATcaac
attcgaaaaagaaatcttgTACAAATGCGAAGGACCTAAAAGACACGTGG
TCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGACTATC
GGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCATCCCT
GGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGTAAGA
AGACCATGAAA Coding sequence (CDS) from alignment at sc0000295_pilon:400645..404105+ >XLOC_002302 ID=XLOC_002302|Name=XLOC_002302|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5674bp|location=Sequence derived from alignment at sc0000295_pilon:400645..404105+ (Clytia hemisphaerica_ch_hm2_pilon) AAGAACATCAAACTCTCCCAATCCGATCTCAATACCGTCACTATGGTGAA CAACTTACAAGTCCAGAAGACAAACCAAAGAAACATCTTGGCAGTTCTTC AAAACAGAATCAAATCCTCGGTCACATATTCAACTGAACAAACGATTACT GGATtgaacaaatttcaaaatgatgTCTATTTCAAGACATTGACTATAAA TGGAAATGTATCCGTTGGCAATCTAACCAATGGAAAGGACCTCTCTAACG TTTCCAGAGATGCAATCTACATTAACAAGGATGAAGTGTTCGAATCCCAA ATAACCTTCACTAGCAATATCACATTTGATTCCATCTCTGTCCAACACAT CAACAATATTTCGACAACCAAGCTTCGATCAATCAACAAAGCATCCAACA TCTCTGGACAACAGACTTTCCAAGACTTCCAGACATCATCAGCCACTCAA AACAACATTCAAGTCAATGGCTTAGTTGATGGTGTGGATACTTCAAAGCT AGTGCTATTGGATACAGATCAAAACATTACTGCATTGCATCAATTTACAA ACAAGACCACAATGCAACAGGATTTCCATATCCAGGGCCTGGTCAACAAT ATGGACATTTCTACTATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGA CACAGTCACTGCATATCAACGATTCTCCAGCATAGAAATCAAGGGAGATT TGAACATGGCGGACAAGAAGACAATTAATGATGTGGATGTCTCCAATCTC ACTTCCAGTGGAATCTATCTGAACGCCGTCCAGGAATTTGGCAACATCGT ATTCCAAAACAACGTCACTTTCAATGACCAAATATCGCTTGGTGAAACAC TCAACAACGTCACAATCGATGATTTGGTATTCACAGATCAAACAACTGTC TTTCATCATCCAATCACATTCAAGCAAAATATCACATGTTCTGATCACGT GACCGTGGATGGAAAAATCAACAACCTCAATATTACTGAAGAACATCAAA CTCTCCCAATCCGATCTCAATACCGTCACTATGGTGAACAACTTACAAGT CCAGAAGACAAACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCA AATCCTCGGTCACATATTCAACTGAACAAACGATTACTGGATtgaacaaa tttcaaaatgatgTCTATTTCAAGACATTGACTATAAATGGAAATGTATC CGTTGGCAATCTAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATG CAATCTACATTAACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACT AGCAATATCACATTTGATTCCATCTCTGTCCAACACATCAACAATATTTC GACAACCAAGCTTCGATCAATCAACAAAGCATCCAACATCTCTGGACAAC AGACTTTCCAAGACTTCCAGACATCATCAGCCACTCAAAACAACATTCAA GTCAATGGCTTAGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGA TACAGATCAAAACATTACTGCATTGCATCAATTTACAAACAAGACCACAA TGCAACAGGATTTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCT ACTATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGC ATATCAACGATTCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGG ACAAGAAGACAATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGA ATCTATCTGAACGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAA CGTCACTTTCAATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCA CAATCGATGATTTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCA ATCACATTCAAGCAAAATATCACATGTTCTGATCACGTGACCGTGGATGG AAAAATCAACAACCTCAATATTACTGAAGACATCATGGACGTTTCATCCA ACCAAACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCA AACAATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCATT TATCAAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACAA AATTCTTCAGTAACTTGACCACAGATTCGATATGGTTCAACAACTGTACA GACCAACAATGTACCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATC AATCCATAAAACCAACGGACAGATATCTGTTAATGGAACTAAATCCTTCT CAGATGTTTTAATCCGTGGTAATCTCACTCTTAATGGTTTATTAGATGGT TTAGAATTCCCTGGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAA TGGTACCTACACTTTCAACAACGTCACATTCGTCAAAAATATCACCGCTG ATACGCTAAATGGTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGG AAGGTTGGCCATGAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCA CACTCACTTTGATGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATC TATCACGTGATGCACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAA AAGACTTTCCAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACATG ACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGA ACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTT TCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGAC GGTGTcaacatttcaaaattgaatGATCAAGCTATGAAGCTGGATGAGGA TCAAATTGTCACTGGAAAGAAGAAGACATCATGGACGTTTCATCCAACCA AACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCAAACA ATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCATTTATC AAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACAAAATT CTTCAGTAACTTGACCACAGATTCGATATGGTTCAACAACTGTACAGACC AACAATGTACCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATC CATAAAACCAACGGACAGATATCTGTTAATGGAACTAAATCCTTCTCAGA TGTTTTAATCCGTGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAG AATTCCCTGGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGT ACCTACACTTTCAACAACGTCACATTCGTCAAAAATATCACCGCTGATAC GCTAAATGGTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGG TTGGCCATGAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACT CACTTTGATGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATC ACGTGATGCACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGA CTTTCCAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAG TCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTG GTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTTTCCA AAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGACGGTG TcaacatttcaaaattgaatGATCAAGCTATGAAGCTGGATGAGGATCAA ATTGTCACTGGAAAGAAGattttccaagagAAGATTGAAGTCTCGATGGA GAATCTCAAAGTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTC TACAACAATCCATCAACAAGAACGAGCCTTCAGTTGTGATTCGACAAAAC TCGACTATCCAGAATCTAACAATCCGTGGTAACACATCCACCCATGCATT GAATGGATTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATG GTGATCAAACTATCCATGGTGATGTCTACATAAATGAGCTTGTTATCAAT GGCGATCTCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGT GATTCAGCTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAG ACGGTATCACAACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAAT CTAACAGAGTTTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTAT TACCGGCAAGAAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTG CTCATAGTTTAATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACC CTATTGAAGCAAGGCAACCAATCAATCCACATACCAACTACATTCAGTCA CGTGATTCTACAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAA ACGTATcaacattcgaaaaagaaatcttgTACAAATGCGAAGGACCTAAA AGACACGTGGTCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAG ATCGACTATCGGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATA TTTCATCCCTGGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATC GTTGGTAAGAAGACCATGAAAattttccaagagAAGATTGAAGTCTCGAT GGAGAATCTCAAAGTTGGTGGTTTGATCAATGGAATCAATTTGACCGAAC TTCTACAACAATCCATCAACAAGAACGAGCCTTCAGTTGTGATTCGACAA AACTCGACTATCCAGAATCTAACAATCCGTGGTAACACATCCACCCATGC ATTGAATGGATTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAAG ATGGTGATCAAACTATCCATGGTGATGTCTACATAAATGAGCTTGTTATC AATGGCGATCTCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGA AGTGATTCAGCTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTCC AAGACGGTATCACAACACAGCAGTTGGTCACACAACTACTCAATGGTCAA AATCTAACAGAGTTTTTCAACAGTATTGTCTTCATCGATCAAAACGCAAC TATTACCGGCAAGAAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGA TTGCTCATAGTTTAATCAACTCCAAGAATCTGACAGAGCTGATGGCAACG ACCCTATTGAAGCAAGGCAACCAATCAATCCACATACCAACTACATTCAG TCACGTGATTCTACAACAGGATTCTGATCTCATTTCGCTTAATCAACATT CAAACGTATcaacattcgaaaaagaaatcttgTACAAATGCGAAGGACCT AAAAGACACGTGGTCGGTAACCATGTATACCAGAAAGCAGAATTCGGACA AAGATCGACTATCGGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAA ATATTTCATCCCTGGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGT ATCGTTGGTAAGAAGACCATGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000295_pilon | genome | sc0000295_pilon:400645..404105 + |
Properties
| Property Name | Value |
| Aaloc | 1948-2850:2559 |
| Aaloc | 1687-1947:1978 |
| Aaloc | 1003-1683:1295 |
| Aaloc | 13-999:1 |
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