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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:326490..329416- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002295 ID=XLOC_002295|Name=XLOC_002295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2927bp|location=Sequence derived from alignment at sc0000236_pilon:326490..329416- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCCAGGAGAATTTTGGTTCAACTTCAAAGAAATGGAGGAAAGTT
GTTTAAAACTAATCTTTTAAACAATACATGCAATCAAGGCATAAGAAAGA
ATACCATCACCCAAAAGTTTGGTAAGACTCTTTCAAGGAGAGGAGTGACT
TTGCCTTACAAATTAAAAATATGTCTGGGTTTTATTTCCTCTTTATAATT
CTCTTCTGACACAGTCTGACATCTGAAGCACCTTCCGAATCTTCTTTGAA
TTTTGCCACTCTGTTTAAAAAAAGCCAATATTGCTTCTCTGTTAGTTAGG
TTGCAACCCACTGTTGGCCTTCAACTTTCTTTACGAATGCTACTAAAAAT
TATGAAATACAAATACTTCCCATTTAATCATCTTTCTCAAACCTGAAATC
TGTAACAATTTTGAGTGTCACCCTTAATCTACATTCCATCACCTTACATC
TAAATTCCCAAAAGTTTTAGATATCGACAGACCAATCCATATTTTACCGT
CAACTGCTCCAACTTGGGACTATCTTACGCAACATAGGACGGCCATTCCA
CCACGCCATTTCACCCAACCTCCAAAGTCATTTTATTTGAGTTCAATGAA
CCACGTATTATCAAATACACGATTTCTCTTTCGCACTGAGTAGGCTTTTA
AATCAAAATATGAAAAAAATCCGTAGTGGAAAACACACGCGAATGTGAGC
GTTTGGCGTCAATCGCACGGCGCAAGTTACACACTCGCTAATCAGAATAC
CAAAATAAACAAATTTCAAAGGCTCAATGTAAGTGATTGATTGAAGTTAT
CATCAAAAAATAAAAATAAAACAAACCTTTAAGTTTAACCTTTCAATAAT
CCAAATAAACAAAATATTTCAAATGAATTGATGTTTAAGTTTGAAAACAA
GCACCATTTCCACCATATACTTTTAGAGCAAAAAGCAGAATTTCGCTGAA
ATCTGCTGCTCTTCCCGGACAAATAATTTCTCAGGATATCAGAGAGTCTG
GTGCTGAATATATACCGTAAGTTGGTCTAATGTCGACATCCGTCTTCTAA
TTTCGACATCCTTCTTTATAGATAGGAATAATAAGAAGGTCGAAATCACT
GATAGTCTAAAGATTTTTCCTCTCATCGCGCTAATCAAAGTCAATCAGCG
ATTCCAACCTTCCTCAGTTTCTATTGTTCCTATCTCTAAAGAAGGGTGTC
GAAATTAGAAGACGGATGCCGACATTAGACCAACTTACGGTAGTTTAGTG
GGTCAAGCTTGTTTTAGTTCTCTATTATAGATAAAGCCTGAAGACCTCAT
CTGAGACGGGGGTCATAAATGATCTTTGTCTATTTTGAAGTCGTACAATC
TTTTACTTCTCAAAACCATTTAGATTCAGGTTTTATATATAATAACAAAA
CAAAAATTTGTTTCATTAAAGCTATTACTTTCAGCGAAATAAGCCTTTAG
TAAATATTTAAACCCCCTGTTTTATTTCGTTATTTACAATGTGATTTTAT
AGCGGGAGTTGGGAACCGGCTAGATTGTGTGATCTGATTGGCTGAATGAG
CAAACGCGGGACTCGGCCCAGGACTTTTTACCCGCGTTTTAAACGTGTTT
ACAGCAATATTTATTCTTTACGCTTTCGTTTTCAAAATCTGTTGAATCTG
TTGGATTTTGGCTTGTGACGATTACCTCGCCTAACATCTGTGTTAGGTGG
CGGGCGTTCTCTAATTCTCCATTCGGCGTCCGGTCATTTTGAATGAAAAC
AAAAAAGTTAAAAAGGGCGCGCTATCAGTGAAAGTTATTGTGACATGTTA
TGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAAATCAAATTTG
TTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGGCCAGAGTCCCATGT
TGCGTGCACTCGTCCCAAGTTGGAGCAGTTGACTGTATGTATGAAAATAC
TCGAATACATGCTTTTGTGATAGATGTTTTGGCGAACGTGACAGTCTTTT
GAATAACTAATTACTCCACATACATTACTTTCCCTCGGCCAATAAAACAT
GATAAATTATCTTGTCTCTAGGTAACTGCCATGGAGTAATTAACCAAAAC
CGAACCAAAACCAATTAGCCAAAGCAAAAGCCTAATCCTCCAAAAAAAAG
TCAAAAAAGACTTGTACCATAGTTTTTGATGATAGTCAGTCCCTGATAGA
TTTCATTTTTTCTTAGGGTCGATTGTTCCAATCTACAATGTGAATTGTCG
CAGCTTTACAACAGAAGCTCAGGTAAGTTACTTGTTGACCAACCTAAACT
TATAAGAACACTAACCAAATACCAATACAGTAAGTCTAACCTCATATTAT
GTAATTTCCCGGGTCCTGAAATTATCTTTTCTTTGTTTAGGACCCGGGGG
TCACTGATTGCTCCTACAAACGTATCAACATTTCACAATCTGACAATGAT
TTCATCAATTCATTTGGGCTTGTAATGAATGAAAACGATGAAGCCATTTC
GGTTGTATTAGGAAATCAGATGCGAAGACAGTTGTGGGAAGGCTGTCATA
CTGAAGAGGAGTCTCGCATGATTAAAATGGCAACCCAAAATATGAATCAT
CTCTTCTTCAACAAAAATTTGTCTGAGGAAGAAGATTACTTGATAAAGTT
ATGTAGCTCTGCTCCTGATAGCACCATTTTCCCCTATGTGTTCAAGTATG
ATGATACTGCATTCATGCCATATGCCTTCCCTGTGGATTACATGACTGAT
AGAGATGAGGTTACTAAACCTGAGGCTACACAGAATTTTGATATGACTGT
CGAGCCTAAATCCTTTCGTCATTCTGAAATCAGAAAGAAGGCTGGTATTT
TCTATACCTCTGAATCAGACTTCCCTGAAAATTATGACGACGAACCACCT
TTTCCCAAATCTTCAAATTATGCTTGA Coding sequence (CDS) from alignment at sc0000236_pilon:326490..329416- >XLOC_002295 ID=XLOC_002295|Name=XLOC_002295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1428bp|location=Sequence derived from alignment at sc0000236_pilon:326490..329416- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCCAGGAGAATTTTGGTTCAACTTCAAAGAAATGGAGGAAAGTT
GTTTAAAACTAATCTTTTAAACAATACATGCAATCAAGGCATAAGAAAGA
ATACCATCACCCAAAAGTTTGATGGCGTCCAGGAGAATTTTGGTTCAACT
TCAAAGAAATGGAGGAAAGTTGTTTAAAACTAATCTTTTAAACAATACAT
GCAATCAAGGCATAAGAAAGAATACCATCACCCAAAAGTTTGGGTCGATT
GTTCCAATCTACAATGTGAATTGTCGCAGCTTTACAACAGAAGCTCAGGG
TCGATTGTTCCAATCTACAATGTGAATTGTCGCAGCTTTACAACAGAAGC
TCAGGACCCGGGGGTCACTGATTGCTCCTACAAACGTATCAACATTTCAC
AATCTGACAATGATTTCATCAATTCATTTGGGCTTGTAATGAATGAAAAC
GATGAAGCCATTTCGGTTGTATTAGGAAATCAGATGCGAAGACAGTTGTG
GGAAGGCTGTCATACTGAAGAGGAGTCTCGCATGATTAAAATGGCAACCC
AAAATATGAATCATCTCTTCTTCAACAAAAATTTGTCTGAGGAAGAAGAT
TACTTGATAAAGTTATGTAGCTCTGCTCCTGATAGCACCATTTTCCCCTA
TGTGTTCAAGTATGATGATACTGCATTCATGCCATATGCCTTCCCTGTGG
ATTACATGACTGATAGAGATGAGGTTACTAAACCTGAGGCTACACAGAAT
TTTGATATGACTGTCGAGCCTAAATCCTTTCGTCATTCTGAAATCAGAAA
GAAGGCTGGTATTTTCTATACCTCTGAATCAGACTTCCCTGAAAATTATG
ACGACGAACCACCTTTTCCCAAATCTTCAAATTATGCTTGAGACCCGGGG
GTCACTGATTGCTCCTACAAACGTATCAACATTTCACAATCTGACAATGA
TTTCATCAATTCATTTGGGCTTGTAATGAATGAAAACGATGAAGCCATTT
CGGTTGTATTAGGAAATCAGATGCGAAGACAGTTGTGGGAAGGCTGTCAT
ACTGAAGAGGAGTCTCGCATGATTAAAATGGCAACCCAAAATATGAATCA
TCTCTTCTTCAACAAAAATTTGTCTGAGGAAGAAGATTACTTGATAAAGT
TATGTAGCTCTGCTCCTGATAGCACCATTTTCCCCTATGTGTTCAAGTAT
GATGATACTGCATTCATGCCATATGCCTTCCCTGTGGATTACATGACTGA
TAGAGATGAGGTTACTAAACCTGAGGCTACACAGAATTTTGATATGACTG
TCGAGCCTAAATCCTTTCGTCATTCTGAAATCAGAAAGAAGGCTGGTATT
TTCTATACCTCTGAATCAGACTTCCCTGAAAATTATGACGACGAACCACC
TTTTCCCAAATCTTCAAATTATGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:326490..329416 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 178-714:538 |
| Aaloc | 124-177:710 |
| Aaloc | 1-120:2928 |
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