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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:221979..225261- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002105 ID=XLOC_002105|Name=XLOC_002105|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3283bp|location=Sequence derived from alignment at sc0000254_pilon:221979..225261- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATCATTATCAATTGTTACACTCTTTGCTGTAGTGTGCTGCACTGT
AACCTTTGGAACAGTTATCCAACGCAAACGATCATCATCTAACAAGAGGA
TTATATGTTTCTACGCAAACTGGGCTCAATACAGAAAAGGGCGTGGCAGG
TGAGAAAGATTATTAGTTATGCTTCAGCAAAAAGTACTCACACCTTTTCA
AGGTCGTTCTCAAATTCAAACTTTACCTTTGACATTACAAAAAGCATAAT
TTGTAAACATCAAAGAAACTGAAAAAAAACTTCACCGTTATTCTCCGCGA
AAATTTACGGTGATAAGCTGCAATCTATTGGAAAAATTTCAACATTTTAT
CATAGGTCCAATTTTTAAGCTCTCACGATCTTGGCTCTCACATGCGATAG
TTTCCAGATAGAGTGTCTCCGAGTGACCTCCATTATTTCCAATATTAGTG
TCTTGCATATCTTGCTTAGCAATAAAGCCCGTTATCGTTAAAGTGCAGGC
CCCTTTTTGAATTTTTGACTGGATTCAAACAGTCGATGATTCTTGCTCGA
CTGCAATTCCGTAATATTCACGGAAAATTAGAGAAAATATATGAAAAGCA
ACGCCCTCTAAAGAAAAACGAGGTATATGATATCCCTGGTAAAAATTCTT
GATAAGATCTGAAAAGATCGTTAAAGATCTTTAAAGATCTTTAACAAGTA
AGAATCTTAAGAGATCTTTGTAAGATCTTACAAAGATTCTTATGCAATCT
TGAAAATTTCTTATTACAAAAAGATCTTTAAAGATCGTGTCAAGAAATTG
TTAAGAATTGTCAAGATTCTTCGCACACATTCATAGTAATAAAATTTAGG
TTTCTTATTAAGTTCTTAAGAAGAATCTTATGAAATCTTATGAAATCTTG
CAACCATAAAATAGTTTAAGATTCTTAGCGTTTCTTTTCAAGTTCTTATA
AAGAGACTTTCCAAATCTTAATTGACAAATATGCAAAGAAACTTTAAGAT
TCTTAGTGTTTCTTATAAAGTTCGGGTTAAGAATCTTGTTGAATAAACAC
AATAACACGTAAATTTGTGGTTATGATAAAATCTTCGATTTTGACTTTTT
TTAAAGAATTTAGATATCAAATTTACATACAACCATACAAATAGGGTATA
TAGGGTAGAATTATTATTCTACAAAATATGTAGATTTCATATTTCTACAG
ACATCTGTAGAATTACGGCAAATTAGTAGATTGCTACACAACCGAGTCTA
TATTGTATACACCACAATGAGTAATTTAGTGCTGACAAGTAAGGCCGAAG
AATACAATGAGGTGGAGTATAATACCGGATAAATAACGATCTAGACAGTT
AGCCTAACTCGTCAGTTAGACTGATTTGAAGTTAAAAAATCTCATGTGTA
TCTGTTTTGAGATCTTGTAATTGTCAAAGTCGAGGCAAATATTCTAAAAT
TTAGGAACCATTAATATTCAGGTCTAAGAATCTCATGATTTCTTTATTAG
TTGAAAGGAGAAAATTTAGCAGATTTATCTTTTGGGTGTGTATATTTTTG
AATACGATTCTTGAAAGATCTTAAACCTTCAAGAATCCTTAAAGATCTTT
AAAGATCCTAAACGATCGTGTCAAGATCTTGTCAAGATCTTTAAAGTTCT
TTGCACAGATCTTGAGAAGAAACCTACAAAGTTCTTGCCAAGTTTCTTTA
AAAGATCTTGGTAAGATCTTATCAAGATTTTCTACCAGGGATATTCTCAG
ACTATGGAAGACACTTATTCTGTGTTTTAGATTTCTTCCACACCAAATTC
CAGCCGACCTATGCACGCATATCACCTACGCTCATCTTCAAGTTGACCTC
ACAACTCACGAGTTGGTCAAAAGACAACGAAATGACGAATTTCTGTTGAA
AGAGTTGGTTAAACTTAAGAAGAAAAATCCAGCTTTGAAAATTATCATTT
CAGTCGGTGAGTTCTTCTTCAGAGCTTTGTTTTGGTGACCCAATGAAGAT
CTTCTAAAAGTCTTAAGAGCATAAGACTTCCGTAGCCAACAAAATACTAA
GAACAAGTATTATCTTAAGGCATTATGTCCATAAAAACACTCACAAAATG
GTAAAGTTAAGGACATTTTAAGAACAATTGAGAAATCTGAAGAATTCAAA
ACGACTTACCTCATCGTTGTTTTCAAAATCAGACGCGACCTTTCACCAAA
AAAACATTACTCCTTCAGTACTGTGAGAAAACTGAAATTCAAGGATTGTG
TCAGCTTCAAACGCAATTTTCTCGGCGGTCAATCTTTGATCAGTGGTCAA
TTAAGGATCGATATTCGATCTTCCTCTTTTCGACATTTTGACGCACCACC
CACCCAGTAAACCAAGTACCCCTGGCTCTTAAGTTATTTTTTATAACATT
TTTATTTACGATTTCAGGTGGCTGGAAACATGAATATAAGCCACGTTTCT
CCAAAATGGTCCAAAATGAAAGAACACGTGCTATTTTCATCCAATCAGTG
CTCAAATGGATTCAAAAAACAGAAGTGGATGGTCTGTCGATCGATTGGGA
GTACCCTACGAAGCGAGGTACTTCCGGCCCTGGAGATAAGCATAGGTACA
CATTGCTGTTAAAGGAGCTTAGAGCTGCCTTTGATGAAGAAGAGCGTCCG
CTTACGTTGAGCGCTTCTGTGTCCTCAGGCCGCAAGAAAATCGACACAGT
TTACGAGCACAAGAAGTTTATCAAGTATTTAGACTGGGTCAATGTGATGG
CATATGCTTTACATGGAGCTTGGAGAAAATTCGCTGGTCATCACACAACA
ATGACTGGAGCAACCAATGTTGAAGATAGCCTAAACGCTTGGCAAGAAAA
AGGAATCCCAGATGAGAAAATCAATCTCGGCGTTGCAACCTATGGTCGTA
CGTTCACACTTAAAGATCCTACCAACTATGGTCTAGGAGCGCCAGTCACA
AACCCTGCTCACGGAAAACCAGGAAAATATACCAGAATCAAAGGAGCTTT
ATCCTACTACGAGTTTTGTGATCAGCAATGGGACCATAAAATTCCCTCAT
ACGACAGCAAAGCCCGAAAACCTTACGCCTCAAGAGGTGATCAATGGATT
GGCTATGAATCACCAAGAAGCATTCGATCGTCCATTGCCTACTTGATGCA
GAAGAACAACAACCGATTGGGTGGGATCGCTATTTGGAAATTGGGATATG
ATGACTTCACTGGTACTTTTTGTCATGAAGGCAAATTTCCACTCGTCAAT
GCAGCCCGGCAAGGAGTTTATGGTATAGCATAA Coding sequence (CDS) from alignment at sc0000254_pilon:221979..225261- >XLOC_002105 ID=XLOC_002105|Name=XLOC_002105|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2382bp|location=Sequence derived from alignment at sc0000254_pilon:221979..225261- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATCATTATCAATTGTTACACTCTTTGCTGTAGTGTGCTGCACTGT
AACCTTTGGAACAGTTATCCAACGCAAACGATCATCATCTAACAAGAGGA
TTATATGTTTCTACGCAAACTGGGCTCAATACAGAAAAGGGCGTGGCAGA
TGAGATCATTATCAATTGTTACACTCTTTGCTGTAGTGTGCTGCACTGTA
ACCTTTGGAACAGTTATCCAACGCAAACGATCATCATCTAACAAGAGGAT
TATATGTTTCTACGCAAACTGGGCTCAATACAGAAAAGGGCGTGGCAGAT
TTCTTCCACACCAAATTCCAGCCGACCTATGCACGCATATCACCTACGCT
CATCTTCAAGTTGACCTCACAACTCACGAGTTGGTCAAAAGACAACGAAA
TGACGAATTTCTGTTGAAAGAGTTGGTTAAACTTAAGAAGAAAAATCCAG
CTTTGAAAATTATCATTTCAGTCGATTTCTTCCACACCAAATTCCAGCCG
ACCTATGCACGCATATCACCTACGCTCATCTTCAAGTTGACCTCACAACT
CACGAGTTGGTCAAAAGACAACGAAATGACGAATTTCTGTTGAAAGAGTT
GGTTAAACTTAAGAAGAAAAATCCAGCTTTGAAAATTATCATTTCAGTCG
GTGGCTGGAAACATGAATATAAGCCACGTTTCTCCAAAATGGTCCAAAAT
GAAAGAACACGTGCTATTTTCATCCAATCAGTGCTCAAATGGATTCAAAA
AACAGAAGTGGATGGTCTGTCGATCGATTGGGAGTACCCTACGAAGCGAG
GTACTTCCGGCCCTGGAGATAAGCATAGGTACACATTGCTGTTAAAGGAG
CTTAGAGCTGCCTTTGATGAAGAAGAGCGTCCGCTTACGTTGAGCGCTTC
TGTGTCCTCAGGCCGCAAGAAAATCGACACAGTTTACGAGCACAAGAAGT
TTATCAAGTATTTAGACTGGGTCAATGTGATGGCATATGCTTTACATGGA
GCTTGGAGAAAATTCGCTGGTCATCACACAACAATGACTGGAGCAACCAA
TGTTGAAGATAGCCTAAACGCTTGGCAAGAAAAAGGAATCCCAGATGAGA
AAATCAATCTCGGCGTTGCAACCTATGGTCGTACGTTCACACTTAAAGAT
CCTACCAACTATGGTCTAGGAGCGCCAGTCACAAACCCTGCTCACGGAAA
ACCAGGAAAATATACCAGAATCAAAGGAGCTTTATCCTACTACGAGTTTT
GTGATCAGCAATGGGACCATAAAATTCCCTCATACGACAGCAAAGCCCGA
AAACCTTACGCCTCAAGAGGTGATCAATGGATTGGCTATGAATCACCAAG
AAGCATTCGATCGTCCATTGCCTACTTGATGCAGAAGAACAACAACCGAT
TGGGTGGGATCGCTATTTGGAAATTGGGATATGATGACTTCACTGGTACT
TTTTGTCATGAAGGCAAATTTCCACTCGTCAATGCAGCCCGGCAAGGAGT
TTATGGTATAGCATAAGTGGCTGGAAACATGAATATAAGCCACGTTTCTC
CAAAATGGTCCAAAATGAAAGAACACGTGCTATTTTCATCCAATCAGTGC
TCAAATGGATTCAAAAAACAGAAGTGGATGGTCTGTCGATCGATTGGGAG
TACCCTACGAAGCGAGGTACTTCCGGCCCTGGAGATAAGCATAGGTACAC
ATTGCTGTTAAAGGAGCTTAGAGCTGCCTTTGATGAAGAAGAGCGTCCGC
TTACGTTGAGCGCTTCTGTGTCCTCAGGCCGCAAGAAAATCGACACAGTT
TACGAGCACAAGAAGTTTATCAAGTATTTAGACTGGGTCAATGTGATGGC
ATATGCTTTACATGGAGCTTGGAGAAAATTCGCTGGTCATCACACAACAA
TGACTGGAGCAACCAATGTTGAAGATAGCCTAAACGCTTGGCAAGAAAAA
GGAATCCCAGATGAGAAAATCAATCTCGGCGTTGCAACCTATGGTCGTAC
GTTCACACTTAAAGATCCTACCAACTATGGTCTAGGAGCGCCAGTCACAA
ACCCTGCTCACGGAAAACCAGGAAAATATACCAGAATCAAAGGAGCTTTA
TCCTACTACGAGTTTTGTGATCAGCAATGGGACCATAAAATTCCCTCATA
CGACAGCAAAGCCCGAAAACCTTACGCCTCAAGAGGTGATCAATGGATTG
GCTATGAATCACCAAGAAGCATTCGATCGTCCATTGCCTACTTGATGCAG
AAGAACAACAACCGATTGGGTGGGATCGCTATTTGGAAATTGGGATATGA
TGACTTCACTGGTACTTTTTGTCATGAAGGCAAATTTCCACTCGTCAATG
CAGCCCGGCAAGGAGTTTATGGTATAGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:221979..225261 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 328-1191:865 |
| Aaloc | 151-324:1503 |
| Aaloc | 1-147:3284 |
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