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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:364867..368518+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002083 ID=XLOC_002083|Name=XLOC_002083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3652bp|location=Sequence derived from alignment at sc0000254_pilon:364867..368518+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCAGACACTATCAGTTATCATTTTGTTATCGATCCTCGGAATTAAACA
ATGTTCATCGATCAAAAAAGAGTTGTTGGATAAGATTGTTGACGATGTTA
CCGACAAAATACTCAGGTTAAACAAGTCTATTATTGGTTAAAAATGACGG
TTGCCAAAAATTTGAGTCAATAgaaagaccttttcataaattacgtcatg
agtaactcttacctcgttttcaaaatattgctatggtaattgattcccag
aggagttcatGATAAGTGTACTTTACTTGTGAAAGTATAAGGCTTAAGAA
ACAAGGCAGTTGTTGCACTCAAAATATAATTAATGAAGGGGCCTATTGCA
ATGTCTTGCGATATTACACCGTAGACCCAGTAGCTGATTCGTTGTAAAGG
TTGTAaaatcaatacgtcacttgcgaCCAATCAGTTAGAGAATACCATGA
ATTTCATATCAACTGATTTTCTCTCTTTATCAATCAGTGATTTGGAAGAA
TTTAATGGTCTAGACATcgataatgatgaaaatgaagaagatgaagatga
tgacgtcatgatggaagttgagaatgatgaaaatgaagatctaACTCCCA
AAAGTAATACTTCTTTCGATTTGTTGATACCCGGAGCACAAAATTTACGC
TTAAACAGTCCTTaaaaaaaGGGAACCGATTCTATACAAAACTTACAttt
ttttCAGACTAACAGCTTTAATccagattttttaacctttttatggggTG
GAACACGaaacttttatttttgcttgGGTTTCCTTAGGTAATGAAATTAC
CAAGTCGACATTAAAAATTACAGCTTTTTCTAAATAGGTTCTTGTAAATA
TTTGAATTGACATAGTACGCATGCACTGTCTTCTGCTTTGGAAATCGGTT
TAGGAAGACCAGGTGATAAACCACAAACATCAAAAAGTTTacagtctgga
tatccaggttCTATCCAGGCTCAATGTTAATTGTGGCGCATCGAGCTTAG
CATTAGGTAAAATTAGAGAATATTAGGAGAAAATCAGAATAAGTGTATGA
GAGTAATATATCATGTTTCACTATTTTAGGGAGAAAAGCGGACCCATGGT
TGAGAGTGCCACCGATTAGAATTAGAATTCCAGTTAATCATCCTCGACCT
CATAATTGTCAAATCCATCGTGATCGTAAGTGATATTCTTTTTCCACGTC
TCTGATTTCTAAACCTTAGAAGGATCTTAAACCAGCAAGGTGATTCAAGC
AAATCTGTTTCTAATCACATTAATTAAGTTCAAACACATTCAATAAACTT
TACTGTATAAATATTTCTGGCAAAATGTATGTATTAAAGGCTTGGTGACA
TCTGCgctggtgcaatgcaacatgttccatcccaccaacacaagaaaaaa
agtgcgtgtgtcatggtttctttttttgttacatgagacaaaaagtgagg
gaaatacccaaaagacacgctgattttgtcccagggacaaaagagagatt
taatttttattggtagaaagaaaaatgggatgGAGacaaagcgtttcagg
ttggtaggatggagcatgttgcatagcaccaacgcgaaaaaaacttttcg
tgtCCTTAAGCCTTAAGAAAGGGTGATTAGAAAGACTTTTAAGTCCAGAC
TAAATACAGCGCGGTTTTGCAGTCGGATGAAAAATACACTAGGAGTTGAT
AATATAAAATATTAAGACTTCAGACTTCAAAAGTGACTCACAGAGTGACt
cacaaaaccgctatctatTTCAAATTCTGTCAAAAGATGCAACCtatttt
gtctccgctgcaaattaaaATGAGACAGTCTTTATGATTCGCTAACTGAA
TGAGCCAGTTCGAGAGATTAGAATAAAAGTTGGCGCTTCTTTTACTCCAA
TGAGTTATGCCCCATATGCTGTtataaaaataaccttttttaaatttaga
atgTGGAAGATTCAAGAACGGCTGTGGACCACAGTTCTACACAAAATATC
TTGGTGGAAAAAATTTCTTGCCCCATGAGAGTACTTTCACTCAAGCATGT
AACAAACATGACTCGTGTTTTGATTGCGTAAGTATGAGCTCGGACCCAGC
CTCTTACAGTAGTTCGCTACTTTTTGATTCTTTAACAATCTCGAAGGATT
TTACCAGCGTCCATCAGTGAAATAAGCTTCAAGAGGCTCTGGGTACGAAT
TCGGGTGACCAATCATCGAGTTGAAGCCACGAGGGAGCTAGAGATGAATC
TCCAAAACCTTTCTATAGCAAGAAAAGTTTGCCTTTAAGTTTGCCCCGCA
TTCACGGCGATCTTTAATCGGATTCAGAAATGTTCAATTTTGGTCATAAA
TAAAAATCGATGATGTCTAAAGACATGATTTTTCCTTTATCTGATGATGA
ACTAAAAAGCGAATatacagtgaaaatttcaaagttctacTCCTTTCCAA
TCCGGAATAATTCCAATTCCGATTTTGAGGGAGCTCACGCGGGATGTGGT
GGGATATTGAGGGAGCTGAAAGTAAACATTTCCAAAATTATCCGATTTTG
AACAACTGtcttaaaaaaaaggttttgtgtTAAAATTGTACATACTAGGG
CTTTTTTCACCCAAAGAATGGGGTTATTTTAAGAACTTTTAcagcacttt
ttacaaaaatagactttcgatttccccgatttttaaacattactctAAAG
ATCGCAGTGATTTAGAAATAGAAAAGGGTAacgtgttctggatgggaaat
aagtggtatCATTTcacttcatttcccatcctggAGTTTCGGATTTATTT
AAATCAATACGACCAATAGTATTTCTTgctttttcaaatctttcagtaAC
CTAATTCACAGATTTTCTAAGATGCATTGCTCTTTCCGGCGCTTTTAAAT
GCGATCGATGTGAGCCtcgatttgaaatttgattatcACTCAAACAAAAT
TTGTGAATTGATTTCATGGACTTCGTTCGGAACAAGTGAATTGcacaaac
tcgaacccagtcatggtttcagcccacttttcaggtgcccccattgaagc
atggtgcacccaacgagttaggtccccttgagaaattgctttgaggTAGG
TACCCCAATCAAGCCgataattgaaatattttgaagtattcaatttgaaa
aatatacacagcccccagagcctccatcaaaagtaccccaaagaattgca
aaataTTAGCCCCCAACCCCTAACCTGTCCTAGGTGCCCTACAGATTACA
CTAAGCACTCCCTTATTTCGCTTTTATTGATTCTGATATGAAAGCGCTCA
CGATTGTATCTATCAGCATAAAATTACAAATCCATGTAACTCGCTCGGGG
TATGAGATTATGAATTGCATTAATTCGttctaattttttcctttcaGTCG
AACGAACATGGTTGGACTCAGAAGCAATGCGATGACCGGTTCCTACAAGA
TATgatcaaaaaatgtaaatgcAATTACTACAAATGGTATCATACAATTA
AAAGAGGAGATTGCATTGCCTGGGCGCATGTCTTCTATGGGGCGGTACGA
GCGGGCGGTCACCAGTTCATAGAACCACATAATATCAATCAGAATTGCTA
TCGACAATGTATGATACCTCTTGCAAGTCCACATGTTGAAGTTACGGAGT
AA Coding sequence (CDS) from alignment at sc0000254_pilon:364867..368518+ >XLOC_002083 ID=XLOC_002083|Name=XLOC_002083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000254_pilon:364867..368518+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCAGACACTATCAGTTATCATTTTGTTATCGATCCTCGGAATTAAACA
ATGTTCATCGATCAAAAAAGAGTTGTTGGATAAGATTGTTGACGATGTTA
CCGACAAAATACTCAGTTGCAGACACTATCAGTTATCATTTTGTTATCGA
TCCTCGGAATTAAACAATGTTCATCGATCAAAAAAGAGTTGTTGGATAAG
ATTGTTGACGATGTTACCGACAAAATACTCAGTGATTTGGAAGAATTTAA
TGGTCTAGACATcgataatgatgaaaatgaagaagatgaagatgatgacg
tcatgatggaagttgagaatgatgaaaatgaagatctaACTCCCAAAATG
ATTTGGAAGAATTTAATGGTCTAGACATcgataatgatgaaaatgaagaa
gatgaagatgatgacgtcatgatggaagttgagaatgatgaaaatgaaga
tctaACTCCCAAAAGGAGAAAAGCGGACCCATGGTTGAGAGTGCCACCGA
TTAGAATTAGAATTCCAGTTAATCATCCTCGACCTCATAATTGTCAAATC
CATCGTGATCGGAGAAAAGCGGACCCATGGTTGAGAGTGCCACCGATTAG
AATTAGAATTCCAGTTAATCATCCTCGACCTCATAATTGTCAAATCCATC
GTGATCaatgTGGAAGATTCAAGAACGGCTGTGGACCACAGTTCTACACA
AAATATCTTGGTGGAAAAAATTTCTTGCCCCATGAGAGTACTTTCACTCA
AGCATGTAACAAACATGACTCGTGTTTTGATTGCaatgTGGAAGATTCAA
GAACGGCTGTGGACCACAGTTCTACACAAAATATCTTGGTGGAAAAAATT
TCTTGCCCCATGAGAGTACTTTCACTCAAGCATGTAACAAACATGACTCG
TGTTTTGATTGCTCGAACGAACATGGTTGGACTCAGAAGCAATGCGATGA
CCGGTTCCTACAAGATATgatcaaaaaatgtaaatgcAATTACTACAAAT
GGTATCATACAATTAAAAGAGGAGATTGCATTGCCTGGGCGCATGTCTTC
TATGGGGCGGTACGAGCGGGCGGTCACCAGTTCATAGAACCACATAATAT
CAATCAGAATTGCTATCGACAATGTATGATACCTCTTGCAAGTCCACATG
TTGAAGTTACGGAGTAATCGAACGAACATGGTTGGACTCAGAAGCAATGC
GATGACCGGTTCCTACAAGATATgatcaaaaaatgtaaatgcAATTACTA
CAAATGGTATCATACAATTAAAAGAGGAGATTGCATTGCCTGGGCGCATG
TCTTCTATGGGGCGGTACGAGCGGGCGGTCACCAGTTCATAGAACCACAT
AATATCAATCAGAATTGCTATCGACAATGTATGATACCTCTTGCAAGTCC
ACATGTTGAAGTTACGGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:364867..368518 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 457-711:3398 |
| Aaloc | 331-456:1952 |
| Aaloc | 235-327:1082 |
| Aaloc | 118-231:489 |
| Aaloc | 1-114:1 |
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