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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:269507..271449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001439 ID=XLOC_001439|Name=XLOC_001439|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1943bp|location=Sequence derived from alignment at sc0000287_pilon:269507..271449+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAGTGTAGAAgagatttacaaaaattttggcATCCTTGCTGATGC
TGGAGAGGAGGCAAGTAAACATCCAGAAGCATACCAGAGCATGATTGATG
CTACTAAAGGAGCTACTGCTGAAAAGAAATTGGCTTGTCAATTCATCCCA
AGATTCTTTGTTCATTTCCAAAGCTTAAGTGATGCTGCAATCAATGCACA
GCTTGATTTATGTGAAGATGACGAGACTCCTATCCGACGACAAGCCATTC
GTTCTTTACCAGAGTTCTGCAAAACATCAAACGACTTTATCAACAAAATC
ACAGATATTTTGACACAACTTTTGCAACAAGAAGACGCCGTTGAATTGAA
GATTGTCAAATCTGGATTGCAAGCATTGATCAGGAAAGATCCACAAGGAG
CCTTAAGTGGTATCTTCTCACAGATTGCTGATGGTGATGATCTTGTTCGT
GAAAAAGCTATCCAATTTGTTTCACAGCTAGCCACAGGTTTGCTATTTGT
TTTTCTCTGTTCAATATTATATCTTTACTATTTATGTGAAATCTCTATAA
TAATAGTGCAAAGATGCTTTGTCTTTTTGGATAAAAGTTTTATACTTGCA
AATAATCTTTAATAAATATTAATGCTCATTGTTTGAAAGTCTTGTTTAGT
AAGCCAATCACCCCCTTTTTCTCCCTTATTCCTTTTAATTCAATCCCAAA
GGTAGACTCGTTCCCAAAGAAAGTATAAGTCACATAATTCTAATGACCAT
TTTAAGGTGGTGTTTTGGACGGAATTGAGAATGCTGGTGAAGCCTTGTTA
CAGGAAATTCGTAAAATTTTGAGTGATGTCACTGGTGAAGAGTTTACGTC
CTTCATTGCAATCCTTGGTACTGTCAAGTCCATCTCCTCAAAACCTCAGA
ACCTGGCTGATATAATCACTGAACAGGCCGAGTTGGATAAAACGTTCCTA
CCAACAGAAGTGGAGAGCCTTGATCGACTGATTTGCTGCACCAGACAAGC
TTTACCGTTCTTTGGAAAAGGTGCATCTCCTGCCACCTTCATGGAGCATT
TGTTTAATAATGTTTTCCCGAAATTGGATGAAGTGCCTTCCTCTGAAAGT
GTCAATTACAAATATGAGGTGTTAAAATTGATCACTGAATTGAGTACTTA
CTCAACTGAGGACGTTGCTAAACAACACATTCAAACCATCTTTGATCAAC
TCATGGAATGTTTGCCAGTTCCTTCTgatgaagaaataaaagaagaagct
ttacaaaaacttgatttttcttcagtcgaatgtttcattttcatcttaCA
CAAATTGGGTGCTAAAAATCCAGAATTCTTAACTGCAGAAGATTTTACAG
ATAAGTTGAAAGAGTTCCGTACACGTCTTCAATATTTTGGTCGAATGGTA
CAAGCGTACATCAAGCAACTCAAGATGTCTCTGCAAGGTTCAGATGGTGC
GAAATTGGAAGAATCAGATAATAAACTGAAAGTAGTTGTCTTGAGAACAT
GTAACAACATTTACGCTTTGCTCAAGGATTTCTTACGCAAGCCACCCTCT
TATAAATGCAATATTCAGGTCTCTTGGAAATCGAAAGCTAACCCTTTGAC
CAGTTCAAATGAAAGTGTTGAGGAGAAGCGTAAACGTGCTGGTATTACAC
CAATCAGCTTGGAAAATCTTCCCGCTAAGAAAGAAAGAGCTGCCACTGGA
GGGGCTAAAGGAACACTTTATTCATTACCAAGTGAAAGAAAAGGAGTACG
CATGGATGAGTATGAAAATACCAACaagaataaaagaaattctttcGAGA
AATCGCCTGGACGTAGAGGTGGTGGCAGAGGTGGGAATCGTGGTGGACGT
CGAAACAGCGGAGGAGGTGGCGGTTGGAATCGCAAACAAAACAGAGATTA
TGGCAGCAAGCAAGAAGAATATGAAAATTTCCTCAAACGTTAG Coding sequence (CDS) from alignment at sc0000287_pilon:269507..271449+ >XLOC_001439 ID=XLOC_001439|Name=XLOC_001439|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3348bp|location=Sequence derived from alignment at sc0000287_pilon:269507..271449+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAGTGTAGAAgagatttacaaaaattttggcATCCTTGCTGATGC
TGGAGAGGAGGCAAGTAAACATCCAGAAGCATACCAGAGCATGATTGATG
CTACTAAAGGAGCTACTGCTGAAAAGAAATTGGCTTGTCAATTCATCCCA
AGATTCTTTGTTCATTTCCAAAGCTTAAGTGATGCTGCAATCAATGCACA
GCTTGATTTATGTGAAGATGACGAGACTCCTATCCGACGACAAGCCATTC
GTTCTTTACCAGAGTTCTGCAAAACATCAAACGACTTTATCAACAAAATC
ACAGATATTTTGACACAACTTTTGCAACAAGAAGACGCCGTTGAATTGAA
GATTGTCAAATCTGGATTGCAAGCATTGATCAGGAAAGATCCACAAGGAG
CCTTAAGTGGTATCTTCTCACAGATTGCTGATGGTGATGATCTTGTTCGT
GAAAAAGCTATCCAATTTGTTTCACAGCTAGCCACAGATGCCTAGTGTAG
AAgagatttacaaaaattttggcATCCTTGCTGATGCTGGAGAGGAGGCA
AGTAAACATCCAGAAGCATACCAGAGCATGATTGATGCTACTAAAGGAGC
TACTGCTGAAAAGAAATTGGCTTGTCAATTCATCCCAAGATTCTTTGTTC
ATTTCCAAAGCTTAAGTGATGCTGCAATCAATGCACAGCTTGATTTATGT
GAAGATGACGAGACTCCTATCCGACGACAAGCCATTCGTTCTTTACCAGA
GTTCTGCAAAACATCAAACGACTTTATCAACAAAATCACAGATATTTTGA
CACAACTTTTGCAACAAGAAGACGCCGTTGAATTGAAGATTGTCAAATCT
GGATTGCAAGCATTGATCAGGAAAGATCCACAAGGAGCCTTAAGTGGTAT
CTTCTCACAGATTGCTGATGGTGATGATCTTGTTCGTGAAAAAGCTATCC
AATTTGTTTCACAGCTAGCCACAGGTGGTGTTTTGGACGGAATTGAGAAT
GCTGGTGAAGCCTTGTTACAGGAAATTCGTAAAATTTTGAGTGATGTCAC
TGGTGAAGAGTTTACGTCCTTCATTGCAATCCTTGGTACTGTCAAGTCCA
TCTCCTCAAAACCTCAGAACCTGGCTGATATAATCACTGAACAGGCCGAG
TTGGATAAAACGTTCCTACCAACAGAAGTGGAGAGCCTTGATCGACTGAT
TTGCTGCACCAGACAAGCTTTACCGTTCTTTGGAAAAGGTGCATCTCCTG
CCACCTTCATGGAGCATTTGTTTAATAATGTTTTCCCGAAATTGGATGAA
GTGCCTTCCTCTGAAAGTGTCAATTACAAATATGAGGTGTTAAAATTGAT
CACTGAATTGAGTACTTACTCAACTGAGGACGTTGCTAAACAACACATTC
AAACCATCTTTGATCAACTCATGGAATGTTTGCCAGTTCCTTCTgatgaa
gaaataaaagaagaagctttacaaaaacttgatttttcttcagtcgaatg
tttcattttcatcttaCACAAATTGGGTGCTAAAAATCCAGAATTCTTAA
CTGCAGAAGATTTTACAGATAAGTTGAAAGAGTTCCGTACACGTCTTCAA
TATTTTGGTCGAATGGTACAAGCGTACATCAAGCAACTCAAGATGTCTCT
GCAAGGTTCAGATGGTGCGAAATTGGAAGAATCAGATAATAAACTGAAAG
TAGTTGTCTTGAGAACATGTAACAACATTTACGCTTTGCTCAAGGATTTC
TTACGCAAGCCACCCTCTTATAAATGCAATATTCAGGTCTCTTGGAAATC
GAAAGCTAACCCTTTGACCAGTTCAAATGAAAGTGTTGAGGAGAAGCGTA
AACGTGCTGGTATTACACCAATCAGCTTGGAAAATCTTCCCGCTAAGAAA
GAAAGAGCTGCCACTGGAGGGGCTAAAGGAACACTTTATTCATTACCAAG
TGAAAGAAAAGGAGTACGCATGGATGAGTATGAAAATACCAACaagaata
aaagaaattctttcGAGAAATCGCCTGGACGTAGAGGTGGTGGCAGAGGT
GGGAATCGTGGTGGACGTCGAAACAGCGGAGGAGGTGGCGGTTGGAATCG
CAAACAAAACAGAGATTATGGCAGCAAGCAAGAAGAATATGAAAATTTCC
TCAAACGTTAGGTGGTGTTTTGGACGGAATTGAGAATGCTGGTGAAGCCT
TGTTACAGGAAATTCGTAAAATTTTGAGTGATGTCACTGGTGAAGAGTTT
ACGTCCTTCATTGCAATCCTTGGTACTGTCAAGTCCATCTCCTCAAAACC
TCAGAACCTGGCTGATATAATCACTGAACAGGCCGAGTTGGATAAAACGT
TCCTACCAACAGAAGTGGAGAGCCTTGATCGACTGATTTGCTGCACCAGA
CAAGCTTTACCGTTCTTTGGAAAAGGTGCATCTCCTGCCACCTTCATGGA
GCATTTGTTTAATAATGTTTTCCCGAAATTGGATGAAGTGCCTTCCTCTG
AAAGTGTCAATTACAAATATGAGGTGTTAAAATTGATCACTGAATTGAGT
ACTTACTCAACTGAGGACGTTGCTAAACAACACATTCAAACCATCTTTGA
TCAACTCATGGAATGTTTGCCAGTTCCTTCTgatgaagaaataaaagaag
aagctttacaaaaacttgatttttcttcagtcgaatgtttcattttcatc
ttaCACAAATTGGGTGCTAAAAATCCAGAATTCTTAACTGCAGAAGATTT
TACAGATAAGTTGAAAGAGTTCCGTACACGTCTTCAATATTTTGGTCGAA
TGGTACAAGCGTACATCAAGCAACTCAAGATGTCTCTGCAAGGTTCAGAT
GGTGCGAAATTGGAAGAATCAGATAATAAACTGAAAGTAGTTGTCTTGAG
AACATGTAACAACATTTACGCTTTGCTCAAGGATTTCTTACGCAAGCCAC
CCTCTTATAAATGCAATATTCAGGTCTCTTGGAAATCGAAAGCTAACCCT
TTGACCAGTTCAAATGAAAGTGTTGAGGAGAAGCGTAAACGTGCTGGTAT
TACACCAATCAGCTTGGAAAATCTTCCCGCTAAGAAAGAAAGAGCTGCCA
CTGGAGGGGCTAAAGGAACACTTTATTCATTACCAAGTGAAAGAAAAGGA
GTACGCATGGATGAGTATGAAAATACCAACaagaataaaagaaattcttt
cGAGAAATCGCCTGGACGTAGAGGTGGTGGCAGAGGTGGGAATCGTGGTG
GACGTCGAAACAGCGGAGGAGGTGGCGGTTGGAATCGCAAACAAAACAGA
GATTATGGCAGCAAGCAAGAAGAATATGAAAATTTCCTCAAACGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:269507..271449 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 490-1674:759 |
| Aaloc | 1-486:1 |
|
