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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1281881..1286170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001345 ID=XLOC_001345|Name=XLOC_001345|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4290bp|location=Sequence derived from alignment at sc0000078_pilon:1281881..1286170- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAGTCAACAACCCAGTACTGTTCAATTAAGCGTCGGCTCGCCAGG
AAGTTTAGCAAAAGCAGTTCTAGTAAACAGTGCTGCAGTTCTAGTTAACA
GTACTATCGCAATCGATCTTCAAAAAGCAGCTGCGCAAAAAGCCGTTCAA
GAGGACAGTGATGGTGATTGTAATGCAGCTACCACAAGTCAGCATTCAAC
ATTGTGTGATGCTTACGAGCTCAAATATTCAAAAGTGCTTAAAGATTATG
AAAACACACAGGAGGTATGAATTTACTATAAAGTTTTTGTTGTTCTTGGC
TTTGTTACCGTAACTTGTCAGAGATATCAAACCATTTTAGATACAGTCAA
AGTTAAAGACCCGGGGGGGGGGTACTAGGGTTAGTGAATGAGGGGTATGT
GCGGACGGGACCTCCGAAAACCGACCCTTAGAGAGACCAAATTTTAGTGA
AAAAGTGACCCTTAGAAAGACTTTTTCGAAAAATTTTCTCTGATTTTCAA
AAATTTCCTACCCTTAGTGAGACTTTTTTGTAATTTCTTCTCTCAAAATC
AAAATTTTTTTCTAAAAATCGTGATTTTCCCACCCTTAGAGAGACTACTT
TGAAATTTCCTGATTTTTGTAACCCTTAGAGAGACTTTGAAAGGTGAAAA
ACCTGACCCTTACCGTCCGCACATACCCAGCACCTATTTTTGCCTAAGTA
CTCCCCCCGGGGTTTAAGAGTACATGATTTCCATGTGTCCCTTGATTGAG
AGTGTGCATAATCAAATACTGTTTTTATACAGCGTATAAATAAATGATTT
GTAGACTTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCAGA
TACATAATTTCGTATCAGGAAAGTGTCTGCCTATTGTTATGTTATGCTGA
TATAAGCGAAGAAACGTTTTTCTTTTCCTCTATTAAACCAATCTTACTCC
TCTACCGTGCCAATCCAATGTGTAAAAGTTTGTGAATTAAAATTGATGAG
TAAGCAAACGGTATCACTCTCATTTTAAAAAACAAAACCTTTAATACTTC
AATTTCAAAAACCTATTCAATCATTTCGAAAATTGAATATCTATTGATTG
AGCAAAATTTCCGATGAGAAACGAACGAAGCTAACGAAGCTAACGAAGTA
TGAAACGGTACAAAAATCTCTTAGATAACCAGCTTTGGTTTATTCTTTAA
GTGGTGCCAAAAAAATATTTTACACCAGACAAAGCAGAATAAGCAAAAGA
TTTTGTGGGCTCGTACGACACCGAAAGGGGAGAAAGTCGTTCTTTCTTTT
GTTTGAAAATGATGTGTAAGCAAATGGTACGGAGATACGTCCAGGCACGA
CACAACGGGTACGGCAGGTACGGCGGATGCATAAAATCACTATAAAATCG
CTTAAAATTTTTTTCATTAGCCGTACCAGATGTAAAAAGCTTCCATTGTA
CCTGACGTTAATTGATGACCTTTAACAACGTAAATTTTCTGAAAATCGTT
TTAGCAACTGCAATACTACAAAGGTGAAGCAAAGTCACAAACTTTATTAG
CAAAGACAGTAAAAGATGAATTAGCAGAAGCGATAGCTGAAAAAGACAAA
GCTAAACAAGAGAGAATTGAAGTTTTAAAACAATATGACTCATTCCTTGA
AGAACATGAACGGAAATTAAAGGTAAGATTTTATCACAGTTGATACTCTC
TAACTCGACGTTCTACTATTCGATGCGCTCCATATGTATGTGTGTTTTTC
TGCGACGGAGACGGCAAGGTTCTAATTTGTCTACATTCTTTACTGACTAA
AATGACGACGGTAAATCAGCACTTTTACCGTCCTTAATTTTGCGGGTCAA
CACTGCGGGTTATTCCAAATCACTTCAGTCACTTACCGTCCTCAAAAGTG
CAAATACATAAAATCGCTATTATTGAAAGTCATTGTCAACAAGAAAACTC
TCATACTAATTAATACGCTCCATTAGTCGATAAAAATCCAATTCCCCTTG
AAAATCGAATTAGAGAGCATCGATAGTATATCGTGTAAAAAGAAGGCATA
CAAAAGCGTAATAAGAAATGGACACGTCGTTCATTCATGATATTTATGAC
GTGATGTTTTATACGGAGAAACCCAGAATAGCCCGGGCGCTTACTACTAA
TTTTATTGTTCAAATTCAAAATTGGTGACAAACACCCCTTCTTTTTCGGG
TGTTTCCGTATAAAAGATTACGCAATGAATATCATAAATTAAAATATATA
TTGGAAATTTATCGTGGCTTGGATCACGAGATTTACGTTTGGCTTTACGT
AAATCTTGTTATCCAAGTCACGATAAATTTCCAATATGAATATCACTGGG
ACGATATAGTCAAACTTATTTAGATCATAAATTGTAGTTCGTGTATGAGA
TTTCAGTTCAGTTTATTGTTTACAGATAGGTGTCCGGGCCAACGTTCGTT
CGTACGTTTCAACGAAGTAAAATAGTTAGCCTCGTATAAGAGCAGCACAA
GTAGTGATAGTCTCGACTGCTCAGGTACATATTTGAGAAAAAGTAAAACC
CAAGATCTCCTACCAACCTGACGAAGAAAAAGAAATTCTGAACTTCAACA
CAGTCATAGAATGTTACAAAATTAAAGAGTAAAGCAAAAACTTAGTTTAT
TTGATTGGTTGATTTTTGGTCTCTTATTAGGTTTTTGTACAAGAGAAAGA
TAAAGAAGTTGAAGATCTACAAGAGAAAACTAAAAACCAAGAAGAAACTA
TCAAATTACAAGTAAGTTATAATACTCAGAAGTGTCAGCGTGACAGTCTA
TACTTTGGTTGATGGTCATTGATAAACCTTGATTGCTACACAGGCGATTG
AGGGTTCGCTTCCCACTCACAGCGGTTCAATTGGCAAGTGAACGAACCTT
CGCCCAGGTCAACCAATGCGCATATGGTCTTAAAAACGTCAAAAAAGTGT
AAATTTCCGAAATTCAGTCTCTCACAGGGTCGATTTTCGAGCTTTTGTAA
GGACAGACACACCCACCCCTCACCAGGACACTCATAATTGAAATCGTCTG
TATTTGTAAGTAAATGGGTCTCAAAACCTTCTACAACTCATCTAAAATAG
AAAGTTGAAATCTCGTATTAGCTATTTATATTTATACACGGGGTTAGTTA
CATTTAGCATCGTCAAAGTACTTAATCATAGATCAACTATTTTACACTTG
ATATCCAACTTTTTCAGAAGCAACAGATTACAGAACAAGATTCGAACATT
GCAGAAGCACAAAAGAAAATTGGTGTCTTTGAAAGAAAGATTGGTTATAA
AGAAAAAACCATGGTAAGTTTGTGAGCCTCCCTTAAAGTATTTGAGATTA
AAAAAAAATTAAATTAAAACCTATTCTAAGTTAAGCGAAAGTGGATAATT
ATACAATTCGTGATCTTTATTCCATGGTAACCATTAACTCGATCAATAAC
TCAACCAATAACTCGACCAATAATTCAACCAATAACTTACTGAATGTCTG
TTGTTAGTAAACCAAGATCCATTCTAAAACCTGGTGATGCTCTTAAATTC
TGTATTTGCTCTCCCTGGTCTAGTGAACATAGAAATATGATCAGACTCTC
TCGATCGCGTCACATGAACATGAAGCTCAAACAACATTTAATCATTTTAC
ATTTTTTCATTTTATAGAAAACATTGCAAAATGAGACTGTTTTCCAAAAC
AACCAAATCGCCAAATTGAAAGAAACCATCGAAAAGTTGCAACAAGAACA
AGTATGTTTATAACCAAAATTTAAAAAATACCTATCATATAGAACAAAAA
TATCCCAGGGATACTAAAGCTGGTCCAGGCGTCTGAATAGTATTACTCTG
CAAATTGACGGAGATTTGCGTAAAAAATTAACCCTTGCGTAAAAAATAAC
CCTGGCGAAAAATAACCAAAAATATTTTACACAGTTATCTAATTTTTTGC
AAATTTTGCTGAATAAGGCAATCTAAATCAATTTTTGCGATCCTACCTGA
GCATATTCCAGTACCGTTTTCGCATCTGTACCCCTCCCAAAAGAACAACC
AAATCAAAACCATCCACTTTCTTTTTGTAGAAATCACTTCATAACAACAT
CACATCTTTACAACAAAAACAAAAATCTAAGAAATGGTATCAACCACTCA
TGTTCTGGAAAAAATTTACAAGCTGTGGTGGAGCAAGACAACGCCCATGT
CAAACGAACAACGAGACTGAGTTTCCAGATATTGAAATTAATGTTGAATT
TGTTGATGTTGCAGGTGAAACAAGCATCACCACAATTTAA Coding sequence (CDS) from alignment at sc0000078_pilon:1281881..1286170- >XLOC_001345 ID=XLOC_001345|Name=XLOC_001345|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1806bp|location=Sequence derived from alignment at sc0000078_pilon:1281881..1286170- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAGTCAACAACCCAGTACTGTTCAATTAAGCGTCGGCTCGCCAGG
AAGTTTAGCAAAAGCAGTTCTAGTAAACAGTGCTGCAGTTCTAGTTAACA
GTACTATCGCAATCGATCTTCAAAAAGCAGCTGCGCAAAAAGCCGTTCAA
GAGGACAGTGATGGTGATTGTAATGCAGCTACCACAAGTCAGCATTCAAC
ATTGTGTGATGCTTACGAGCTCAAATATTCAAAAGTGCTTAAAGATTATG
AAAACACACAGGAGATGGACAGTCAACAACCCAGTACTGTTCAATTAAGC
GTCGGCTCGCCAGGAAGTTTAGCAAAAGCAGTTCTAGTAAACAGTGCTGC
AGTTCTAGTTAACAGTACTATCGCAATCGATCTTCAAAAAGCAGCTGCGC
AAAAAGCCGTTCAAGAGGACAGTGATGGTGATTGTAATGCAGCTACCACA
AGTCAGCATTCAACATTGTGTGATGCTTACGAGCTCAAATATTCAAAAGT
GCTTAAAGATTATGAAAACACACAGGAGCAACTGCAATACTACAAAGGTG
AAGCAAAGTCACAAACTTTATTAGCAAAGACAGTAAAAGATGAATTAGCA
GAAGCGATAGCTGAAAAAGACAAAGCTAAACAAGAGAGAATTGAAGTTTT
AAAACAATATGACTCATTCCTTGAAGAACATGAACGGAAATTAAAGCAAC
TGCAATACTACAAAGGTGAAGCAAAGTCACAAACTTTATTAGCAAAGACA
GTAAAAGATGAATTAGCAGAAGCGATAGCTGAAAAAGACAAAGCTAAACA
AGAGAGAATTGAAGTTTTAAAACAATATGACTCATTCCTTGAAGAACATG
AACGGAAATTAAAGGTTTTTGTACAAGAGAAAGATAAAGAAGTTGAAGAT
CTACAAGAGAAAACTAAAAACCAAGAAGAAACTATCAAATTACAAGTTTT
TGTACAAGAGAAAGATAAAGAAGTTGAAGATCTACAAGAGAAAACTAAAA
ACCAAGAAGAAACTATCAAATTACAAAAGCAACAGATTACAGAACAAGAT
TCGAACATTGCAGAAGCACAAAAGAAAATTGGTGTCTTTGAAAGAAAGAT
TGGTTATAAAGAAAAAACCATGAAGCAACAGATTACAGAACAAGATTCGA
ACATTGCAGAAGCACAAAAGAAAATTGGTGTCTTTGAAAGAAAGATTGGT
TATAAAGAAAAAACCATGAAAACATTGCAAAATGAGACTGTTTTCCAAAA
CAACCAAATCGCCAAATTGAAAGAAACCATCGAAAAGTTGCAACAAGAAC
AAAAAACATTGCAAAATGAGACTGTTTTCCAAAACAACCAAATCGCCAAA
TTGAAAGAAACCATCGAAAAGTTGCAACAAGAACAAAAATCACTTCATAA
CAACATCACATCTTTACAACAAAAACAAAAATCTAAGAAATGGTATCAAC
CACTCATGTTCTGGAAAAAATTTACAAGCTGTGGTGGAGCAAGACAACGC
CCATGTCAAACGAACAACGAGACTGAGTTTCCAGATATTGAAATTAATGT
TGAATTTGTTGATGTTGCAGGTGAAACAAGCATCACCACAATTTAAAAAT
CACTTCATAACAACATCACATCTTTACAACAAAAACAAAAATCTAAGAAA
TGGTATCAACCACTCATGTTCTGGAAAAAATTTACAAGCTGTGGTGGAGC
AAGACAACGCCCATGTCAAACGAACAACGAGACTGAGTTTCCAGATATTG
AAATTAATGTTGAATTTGTTGATGTTGCAGGTGAAACAAGCATCACCACA
ATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1281881..1286170 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 694-903:211 |
| Aaloc | 610-693:624 |
| Aaloc | 514-609:1074 |
| Aaloc | 433-513:1611 |
| Aaloc | 265-432:2787 |
| Aaloc | 1-264:4291 |
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