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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1180024..1182947- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001343 ID=XLOC_001343|Name=XLOC_001343|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2924bp|location=Sequence derived from alignment at sc0000078_pilon:1180024..1182947- (Clytia hemisphaerica_ch_hm2_pilon)
TCAATAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTGCACACAC
ACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGATCAGATC
TCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGGTAAGGATA
GAGAATTCTTAGTAATTAGCTATCTATTTTAGAAAATAATAGGATATTTT
TAATTGACTTGAAAATGTTTTTTCTACAGTAGGGTATCGATTTTAATATG
TTGTTTTGATCAGTGAGACGCATGATCAATGAGACAAAAAACGTCTTTTT
TATTAAATTTTTCTATTCACTTTTAAACTCAATTACTGTTAGCTGGGAGT
CTATCACGGGACGAAAAAATAAGGAAATTAAATCAACGCCTACTATAGAA
GTTGAAAATGTTTTCAAAAATTCTCCCGTTTGCTTTTTTTATAATTTTGG
CAGTTTCGGACATATCACGAAAAATAACCTCTCGAAAGTCATGCTTCAAC
TTGTAATAACCCAATTCAAAATATGATTACGTAAAGCACTTATTATGTTG
AAATTGTTTTGTTTATTATATTATTCATGAATCGTTAACAAAATAATAAA
AATTGAATAGAAAGAATAAAAGAAAATGATAGAGAAAAAAAAATTTTCGA
AAAGATAATTACTGTATTGAAACTATTATTAATTTTCTCTTTAGTATTTT
TGCGAAATAGTTAATGACGCTTGAAATCAAGAGGTTCTTTAATTTTGAAA
TCAATTATATAGTGCATTAGGAGATCGAAAGACCGAAATTTTGTGCAAAA
TAACAAAATTGTTTAAATAATTTTCATTTCTCTTTTGTAGGAAGCACTAT
CAATGGGCAGTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAACCAA
AAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATGGTC
TAAGAAGCGTTCAATCGAAAGCGATTTTGATGATTTTCATATACCACCAA
AACGAGCTAATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCTGAA
GATGACAAGCGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAACGA
GCACGTCCGACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAAAAG
ATGTTGACGTTAACACCTTTACAATGACGGGACAAGAATTATGTAAACTA
ACACGTGAAGAATTCTTACGTCTAGCTCCCGCATACAACGGCGATATATT
GATGGCGCATTTATGCGTCTTACGCAAAGGTATTGATGTGTTCATTTTGT
GTTTTTCTCATTTTTAAAATTGCCACTTTTTTTCATTGTCAAGTGCTTTT
TATTTGAATGGGTTTTTTTCAGTTGATTGTTTTTTTAAAGAGAGTCGTTA
GTGGTCTTCAAGTTAATTACAAATCATTATAAGAAAATAGCTTCAAAGCA
CAAAATAACATTTTGAATGATAGAGAGCGGTCACATCAAATAAATGGTAT
TAAAAACGGTCGAAAGTCTGATTTAATTGTCTATGTGGCGATGACATAAA
TTTATCTTGTTAAAAAATAAGTGTTGCACAAATAAATAATATTATTTTTT
TTGTATCATTTCATTTATAGCACCTTTACCAAATCTCACAACTGAAGATA
TCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGGCGCT
AAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCC
ACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTT
CGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTCATCC
TCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTTCAAA
ATCATTCGAATCACCCCCAACATCTCACAGTGGTAAGGACATTTTCCTCC
ATACTATAATTTTGTATAAGGTGGCGTTGATTTTTCCTTGAGGCTAAATT
CTCACGTAGTTCTATTTTTTTTTTGCCTAATACTTCAAGCTTCAAGTACT
CATACTTCTAAAAAACTTCTGACTGTTTCTTAATGTTGACGTCAGCAAAA
AAAATCTTGAAAAATTTGTTATGATAACACAAGTATCTAATTGCCCGCCT
TCTATTTTGTCATTTAAAAAATTTCAACAAAAAAAATGTTTTCCTTACTG
AAGCTTCTTAAGTCCAACTAAGAATGATAACAAGCAAACTTAAGTGTGGA
AATCTACTCTTAAAACTCATAACACATCACATCAAAAATTACAAAAATTT
ATAACAGAATTTCTCTTTTTTTTTTCAACAGAGTACAACCCGTCATGTCC
CTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGAAGCG
GACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCCATCA
CACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAACTTAC
CGATCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAACCCA
ACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGATAAA
AACATCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCGACTT
TCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAATTAC
ACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATTCTAC
TCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACCCATC
GTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAACCAAT
ACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAGCCGA
CAATCATCGGCACCGTACTTTTAG Coding sequence (CDS) from alignment at sc0000078_pilon:1180024..1182947- >XLOC_001343 ID=XLOC_001343|Name=XLOC_001343|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000078_pilon:1180024..1182947- (Clytia hemisphaerica_ch_hm2_pilon)
TCAATAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTGCACACAC
ACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGATCAGATC
TCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGTCAATAGAA
CGACAAGAGAAGCTACGAAACGATTTAACATTTGCACACACACAAATATC
GACACAACAACAAAACAACAAGATGTTTGCGGGATCAGATCTCTCCAATA
ACGTTGTTCCTGACCCAACTGCATACGCACAGGAAGCACTATCAATGGGC
AGTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCC
TTCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATGGTCTAAGAAGC
GTTCAATCGAAAGCGATTTTGATGATTTTCATATACCACCAAAACGAGCT
AATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCTGAAGATGACAA
GCGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAACGAGCACGTCC
GACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAAAAGATGTTGAC
GTTAACACCTTTACAATGACGGGACAAGAATTATGTAAACTAACACGTGA
AGAATTCTTACGTCTAGCTCCCGCATACAACGGCGATATATTGATGGCGC
ATTTATGCGTCTTACGCAAAGGAAGCACTATCAATGGGCAGTATGGATGA
ACAAAGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGC
CACCAAAGCTAACAGACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAA
AGCGATTTTGATGATTTTCATATACCACCAAAACGAGCTAATATGTTTGA
AAATGAAACTAAACCTGAAATTCAACCTGAAGATGACAAGCGTGTTATCG
TACCTGCCGACCCCATGTGCTGGACCAACGAGCACGTCCGACAATGGGTC
CAGTGGGCCATTAAAGAATTCAGCTTAAAAGATGTTGACGTTAACACCTT
TACAATGACGGGACAAGAATTATGTAAACTAACACGTGAAGAATTCTTAC
GTCTAGCTCCCGCATACAACGGCGATATATTGATGGCGCATTTATGCGTC
TTACGCAAAGCACCTTTACCAAATCTCACAACTGAAGATATCGATAAAGC
CCTGGCCCCACCATTGAGTCACAATGCTAATAACGGCGCTAAAGTGCCAA
GTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGT
AGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTT
AACGAGCTGTGCTTACAACCAATCATCTTCGTCTTCATCCTCATCGACTC
CATCTTCATCGACAAACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAA
TCACCCCCAACATCTCACAGTGCACCTTTACCAAATCTCACAACTGAAGA
TATCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGGCG
CTAAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCG
CCACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGATGG
TTCGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTCAT
CCTCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTTCA
AAATCATTCGAATCACCCCCAACATCTCACAGTGAGTACAACCCGTCATG
TCCCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGAA
GCGGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCCA
TCACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAACT
TACCGATCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAAC
CCAACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGAT
AAAAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCGA
CTTTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAAT
TACACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATTC
TACTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACCC
ATCGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAACC
AATACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAGC
CGACAATCATCGGCACCGTACTTTTAGAGTACAACCCGTCATGTCCCTCA
CCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGAAGCGGACA
AATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCCATCACACG
CGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAACTTACCGAT
CCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAACCCAACAT
GAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGATAAAAACA
TCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCGACTTTCAA
GGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAATTACACGC
CGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATTCTACTCAC
CCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACCCATCGTCC
TCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAACCAATACGG
ATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAGCCGACAAT
CATCGGCACCGTACTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1180024..1182947 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 898-1488:592 |
| Aaloc | 586-894:1303 |
| Aaloc | 145-582:2085 |
| Aaloc | 4-144:2925 |
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