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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1094148..1097454- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001340 ID=XLOC_001340|Name=XLOC_001340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3307bp|location=Sequence derived from alignment at sc0000078_pilon:1094148..1097454- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACCACATTATAGTGTTATCGTGTTTGCTATGGATAAAATTAAC
AGGTAATTACAATTTTTTTGTACAGTAGAGTCTCGAACCTTTATAATTCG
AGTGTCTCCTTAACTCGAATAAGCTCCCTCGTCCCTTACCGTCGTTTCGT
ATAAGATTCCCATTTCCTCATTAAGATTCTCGTTATTTTTCCGGGATAAC
TAGCACGAGATCAGAAAGGGTTTGCTTGTAAAGGTACGGAAGGTGTTGAA
GTTACTCACGAAATTGCCCAATAGTCCAGGGAAAGTGTGCTAAAAATGAA
AACAATTGTCCATTTTGAGATACATACCATGATGATTTTTAGAATCAGTA
TGAAAAAACCTTTCCAACGGTATATAATATCACATGTTTTGGAACAAAAA
TAAAAAAGATTTTCCGGCATGCAGACTGGTCTGTAAATTACTTCCGTAGC
TCATAACTCGGACCCAGTCCATTTTCAGATATATGTTGTGATGTTTTTTA
GAATCAGTGTGAGAAAACCTTTCCAACGATATATTATATGACATGCTTTG
AAGCTTTGAATTTTTTTCTTGCCTGGGAGGCATTCTGGTCTGTAAAATAC
ACAAACAGGTGTTCTGGAAGTGGGTCAGAGGCTTAAAATGTTTCTTACCC
CCTAAGGTACCACTGTACGAAATTTCATGCTTTCTAGTCAAAAACGCACA
ATTGATGCACACTTTCCCTGGACTATAACTTTCCGAAGCTTAATTTTCAA
CTACCCAAAGAAAAGCTAGAAAAGTGGAAAAGGAATCTTAGTACGGAAAT
GGGAATCTTATACAAAACAACGGTATAAACCTTACTCCGTAAGTAGAATT
TTCCTAACTCGAACAAATTTGTGTTCCCCTTGCGACTTCGAGTTATGGAG
ACTCGACTGTATTATATATTTTCTAAGTGCTATGGAATATAGTTTTTACA
GTCTTCACTATTATAAATACTTGGAAGTATTCTTAACTTTAATCTCTCTG
TCTTTATGTTTCAAATCCTTTAAAAGGCAGTCTGGAGACTTTGGAAATCG
TCAGATTCGGATGAAATTTAATTAAGCTTGCTCCTTGTGTGCCTTTTTTC
ATTTTTTCAAAAATTTTTATCTTTAAGGCCTAGAACGATCTTTTCACTAT
ACCTTCGATTTAGCCCCCGTTTGTCTGTGTACAAAATAATTTTTTTTTTT
AACTTTCAGAATGTTTTCAATGGGACAATTCAGTTAGTGATTCATCCGTG
TATGCTAACAACTCAGGCTCCGCAATTATCAAGTTCAGATATAGCTATGG
AGCTGAAGACCGTTCAAGTGTTAATATTACATGTGGAATATGGAATACAG
ATCAAACCAAAATTATTCCCATGGTGACTAAAATTGGTAACCAACCTGCA
CAAAGAAGAAGTGGAGTTACTGGCGATGTTTTAGGGAATAATGCAGCTCT
TTATACAGAATCTACACAACCAACTGTTATTGGGTTAAGATTGAGTAATA
TTGCAAAGACCTTCCCAACTCAGTACCGTTGCGATGCATCTTTTACTAAA
GCCGATGGTGTGGCTGATAGTGTCCTAAGTGAACGTGTCATCCTTAATGT
CTTAGGTATATATTTTTAAATACATCGCCGTGTCAATTCAAGACAGACTT
AAGTCCATTTTTTCGAAAATTGACCACAACTCCCCTTTTTCAGCATGCAC
GCTTTCCAAAAACGGCCTCAAATCCACAGAGTTCTAATGGTAAAGAGGTG
TATTTTGCAATTCAAAAAAAAGATATCAACGATAAACAGCCTCAGGTCCT
AAATTTTAGGCCAAATTTTATTTTCTATGAAGCATTGACATGGAATGTGT
AGCCTTAAGTCCAAGTGTTTTGAATTGACAAGGCGATATGGTCTTTCCTC
AATAGGATATACAGTAACAGTGTTAGTAAAAGTACACATTTTTTTCTTAA
GAAAAATTATTGAAGCCTTCGGGTATTCTTAGCTTTTTAAGTTCTCAAAA
TGTTATTATTTTCACCATTTTGTGAGAATTTTTGTTCGATTTCATAAAAA
ATTGGTGTTTTAGAGTTTACAAAGACTTGAAATGTTCTTAATTTGTTCTT
AATATTTTGATTAGCGAAGCCATATGTTCTTATCAAATCTATTCTGATAA
AAAAGCGTGTATTGATATAGACGATGTTATTGTCCGTTACAGTGATAGTA
AAGGCGGGAAAATGCGGCGGTATGCGGAAAAAAAATCGGTGGGAGAGTTT
TGAAGACTGGCAACTCTACCGACTTTAAACTCTTTTCCGCAAAAAACTCG
TTTGCGAATTTTCTTCGGTTTTGGGTGGCCTTTTTTCTTAGATAGTGATT
CGTCTTAGACTATAGCATAGTCTAGCGTCTTAGACTGTAGCATAGTCTAG
TATTAATAGTGAGACTTGCCGACTTAAAAGGAAAGATACATTTTAATTTT
GACTGTCATGTTTAGCAATTTTGACTCAATGGGTAAAAGCCATGACATAA
AGCAAGAAATTACTTTCAAAAAAGTGCTTTGAAAGTTCAAAAGTTGAACT
ACTCAAAAAATGTTAAAAAGAAAAGCTACTGTACTGTAATTATAGGAAGG
CCAATTTTTTACTTTCGACCAATATTCAATTAATTTGTCTGTTGAACCAT
GACAATTGATTTTTGTCAACTTCAAACAAAATTGAAAAATCAAAATGTGG
GCTTAAATTTTTAAGATACTCCAACGATAAATTGAATGCTTTAAGGCTGG
GGAACCAAAAGTTTTTTTCAACAATGCAACATGCTTCCATCCCACCAACC
TGAAACGCTTTCTCGTGTCTCCACCCCATTTTTCATTTAATAACATTTGT
GCTTCTCTCACTTTTAGCCCAGGGACAAAATCAGCGTGTCTTTTGGATAT
TTCCCTTACTTTTTGTCAATTTTGTCCCATGAAACAAAAAAAGAAACCAT
GAGACACGCACCTTTTTCTTGTGTTGGTGGGATGGAGCATGTTGCATTGC
ACCAACGCAAAAAAAAGGTGCGTGCCCACAAGGTCATCGATTTTTGGATT
CGTAATAATCCATCCACCTTTATTATTTTATATTTTCAGAACGTCCAAAA
TTTACAAACTGTTTGCAAAACATACAATCCAAAGAAACTGTGGCTGGCAA
CTCACTCGATATAACATGCAAAGTCTCTGGCAATCCAACTCCTAACTTGA
AATGTTCATTGTTGGCTTTTGATAGAGAAATTTTAAATACTTTCCCTAAA
AAAAATAGTGGTCGAAATCTCGAGGAAGATGGTAATGATTTACTCACTTT
TTTATAG Coding sequence (CDS) from alignment at sc0000078_pilon:1094148..1097454- >XLOC_001340 ID=XLOC_001340|Name=XLOC_001340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000078_pilon:1094148..1097454- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACCACATTATAGTGTTATCGTGTTTGCTATGGATAAAATTAAC
AGATGAAGTACCACATTATAGTGTTATCGTGTTTGCTATGGATAAAATTA
ACAGAATGTTTTCAATGGGACAATTCAGTTAGTGATTCATCCGTGTATGC
TAACAACTCAGGCTCCGCAATTATCAAGTTCAGATATAGCTATGGAGCTG
AAGACCGTTCAAGTGTTAATATTACATGTGGAATATGGAATACAGATCAA
ACCAAAATTATTCCCATGGTGACTAAAATTGGTAACCAACCTGCACAAAG
AAGAAGTGGAGTTACTGGCGATGTTTTAGGGAATAATGCAGCTCTTTATA
CAGAATCTACACAACCAACTGTTATTGGGTTAAGATTGAGTAATATTGCA
AAGACCTTCCCAACTCAGTACCGTTGCGATGCATCTTTTACTAAAGCCGA
TGGTGTGGCTGATAGTGTCCTAAGTGAACGTGTCATCCTTAATGTCTTAG
AATGTTTTCAATGGGACAATTCAGTTAGTGATTCATCCGTGTATGCTAAC
AACTCAGGCTCCGCAATTATCAAGTTCAGATATAGCTATGGAGCTGAAGA
CCGTTCAAGTGTTAATATTACATGTGGAATATGGAATACAGATCAAACCA
AAATTATTCCCATGGTGACTAAAATTGGTAACCAACCTGCACAAAGAAGA
AGTGGAGTTACTGGCGATGTTTTAGGGAATAATGCAGCTCTTTATACAGA
ATCTACACAACCAACTGTTATTGGGTTAAGATTGAGTAATATTGCAAAGA
CCTTCCCAACTCAGTACCGTTGCGATGCATCTTTTACTAAAGCCGATGGT
GTGGCTGATAGTGTCCTAAGTGAACGTGTCATCCTTAATGTCTTAGAACG
TCCAAAATTTACAAACTGTTTGCAAAACATACAATCCAAAGAAACTGTGG
CTGGCAACTCACTCGATATAACATGCAAAGTCTCTGGCAATCCAACTCCT
AACTTGAAATGTTCATTGTTGGCTTTTGATAGAGAAATTTTAAATACTTT
CCCTAAAAAAAATAGTGGTCGAAATCTCGAGGAAGATGGTAATGATTTAC
TCACTTTTTTATAGAACGTCCAAAATTTACAAACTGTTTGCAAAACATAC
AATCCAAAGAAACTGTGGCTGGCAACTCACTCGATATAACATGCAAAGTC
TCTGGCAATCCAACTCCTAACTTGAAATGTTCATTGTTGGCTTTTGATAG
AGAAATTTTAAATACTTTCCCTAAAAAAAATAGTGGTCGAAATCTCGAGG
AAGATGGTAATGATTTACTCACTTTTTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1094148..1097454 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-666:217 |
| Aaloc | 55-447:2097 |
| Aaloc | 1-51:3308 |
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