|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1040876..1044527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001338 ID=XLOC_001338|Name=XLOC_001338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3652bp|location=Sequence derived from alignment at sc0000078_pilon:1040876..1044527- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCGTTTAAATGGTGCTTAATTATGGCTGCATGTACACTTTGTTT
GATACACAGCACAGAAGCAAAACTACATTGTAACTGTCAAGCGAAACGTT
GTGTGAAACCAACAAATTGTAAAGCTGGGACACACAAAGACGCCTGTGGC
TGCTGTGATGTGAGTTGTGAGACATATTTTTTATCTAACTTTATAAGCGG
CACCATCATGCAGTATCGCATATCGTCGTATCAGCAATCTGAAAGTGATA
TATTTGGACACGCTGTATAGAGAACATTTTTGAAGTTTTTCCAAAACGAA
TTTTTGCTTTATAGCTCATTTGTGCGGTCTAAGAACATTCTAAGGCTTTG
GAGACTTAAAAACATGCATTTTCTTAAGAAATTACATCAAAATGATCAAA
AAATGCTGAAAATAAGAACATTTTAAGAACATTCTTAGGCTTCAAATCCA
AAAAACTAAGAACATCCGAGGGCTTCGAAAATTTTTGACGTTCTTATAAA
AAAAACGTGTAATTTATGAAAATCTCAATCAAACCTTAGGTATGTGCCAA
AGAAGAGGGTGAATTATGTGGTGGTGAAGAATATAACCAAGGAGAGTGTG
GCCAACAATTACAATGCATGGTCAGACATATTAAAGATAATCGAAATCGT
GATAAGAAGACTGTCAGTGATTTGATTGGTCGATGCGAATATAGTAAGTG
GCCATGCAGTGATCTTTGTCAAATGCTTTACGTTTCTAGTTTCTGTTTTA
TTTGGTTTTACGTGCTCTCTGCCAATTCTCTCTGAATAGGATTGAATTTT
CCCATGGGGTTCATCTCAGACATATTGGGGGAAGGGAACATGCGGCTGTT
CAGGATCCCTTTTTCAACCTGAACAGGGTCCAAATGTCGGCTATAAGGAG
GAACCAAACTCCGTCTGGGTTCTACAAAACATGATATCTGGTAAGGTCAA
TCTAGTCAATCAACTCTGGCAACCTCGCCGTCGGCAAACTCGTACCCAGA
GCCACTTCCACCATTTTTAAATTTTACTGCAGAACGTTGATACAATCGTG
AACGCTATCAAAATGAAAAAAATGCTCTTAAAAACTGAGAACGAGTTTGT
CCTGTCCGATATTAAGAACATTATCCTCCACTAGAAGTACACGGTGTTTA
TATAATCTCTCATTTCCAAAAATCATTTTTTATAGTTCCATGTCATTACC
AATCTTGTCCATTCGGACAGCTATGTACTATGGTTAAAAATCTCCCGACA
TGCACTTGTCCGAAATGCAAAGACATGATTATGTCACCGGTATGTGGCGA
GTTGAACGGTGTTACATATAAGAACGAATGTGAATTGAGACAAGCTGAAT
GTTTACAAGGCAGAGAAATAAGAATGACACGTGGACCATGTAAAGGTATG
TATTTTTACAGTCTAAACTTCATAGCTCGAACGCGCAAATTTGTTCTTGT
TATGGAAATTTCGAGTTATAGAGTTATACGAGTTATTAAGCTTCGAGTTG
TGGAGACACCATCGGCATAGAAACTAGAATGTGTAATCTATTGATTATTA
AAAAACTATGCAAATTTTGTAAGCTAAGTACCTTATCGGCCAAAACTTTT
AGTCACCAAGCCAAAATTTAGTCACTTAGGGCCGACTAAGTTTTGGCCGA
TAAGGTACCATAGAAAATTCGATTAGTAGAAGCTCGAATTAGAGAGAACC
CAGTTGTTGATTTGCTTGATTTTCCAATGCCATTAAAATGCATTATCCAA
ATTTCATTATTCCAATTCAATTCGTTTTTCTAGCTAAAAACATCAGTCGT
GTGGTATGCCGTGAAGATGGGATGAGAATCGAAGTGTTGAAATCCTTCGT
TGGCAATGAACAAATCACTCAAAAACGCTTGACGTTATTGGACAGTAACT
GTGTCTTCAAAAGCAATGAAACTCATCTCTTTATTGAAACAAAGCTGAAC
GAATGTGGTACAAAAGCCAACTTTGCACTAACCTCTGTTATCTATTCAAA
CACAATCCGTACAGAGATCGACCCCAATGCGGTGATTATACGAAATAAAG
ATTCCGTACAGATTCCAGTTGAGTGCTTTTATTCAATAACCGGTAAAGGG
AAAGTTGAAATAGCAAGCCGTGGCAAGTTTGGAGACCGTATTGAGGAAAG
ATTACGCGGGAATGGTATCGGTGTCCGGATTAAAAGTGATAATCAACGGA
AATACCGGTCAGCTCAAGAAATGAAAATTTCTTTGGACAAAGAATCCAAA
TACATTGTTGAATTGAAAGCGAAAGCCTTAAAAGTACCTGCTCAAGCACA
TCTTTATCCGAAGTTTTGTTACGCGACACCTGTCGATCGTAGCGATCGTT
GGATGAGATACACGTTGATTAGAGATGGGTAAGCTTTTCCTGTGTTGAAT
TCATTCCCAACCCCCTTAGTTTATGATGATTATGAAGCAATGTTTTTATT
TGAGAATAAGGAATTGCAAATTTTTTATTGATGTTTGTTTCTCATTTTTG
ATTATATCTTTCAACTCCAAGTAGTTTAATTGCTATTTGGATTTTTAACA
TTTTCTCTCGAAATGGCCACCTCGCCAAACGCTCTTAGTCTACTTCACTG
GACTCTAGTAGCACTTTTGCCTCTCTTGTCAATCAAAACGGAACTCTGTT
GCTTTGACCCTTTGAATTTGAAGCATTTGTTTCCCTTTCTCGAGTACACA
TTTTTTTATACAAGCAGCTTTATACAAGAGGGCTCAAAACAGCCGATTTT
TTCTTCACTATCTCGTAAAATAAAAGCTTTTTAGATAATTTAACCACGGC
CAACGATAGCCCTTAACCCATTAAGCATAAATATATATATCAGCTAATTT
TCCAGTAAATGAGCTAGAATGCTAAGCAACCCCACCCCTGACACGAAAAT
TGGAGTTGCTTATAGAAAAGAAATGTGTACGCGCCAAGAGATTTTTTCCA
ACTAGTAAATTACTTTTCCACCTGAATAGAGCCCATGTCTATGGAAATTC
AAAATTCATGTTTCATTTTTGTACGAGGGATGTTTATAAGCAACTTCAAT
TTCCGGGTTAGGCCTTTTGGTTGCTTTAGCTCATTTACTGAAAAACTAGC
TTTGACCACCCTTAATATTATACCATATTTATGTTTATTGGATAAAAAAG
CTGTAGTTTGCCATGGTTAGATTATCTAAGGTTTTACTTTACTACGAGAT
AGTTGAAATGATTTAGCCTTTAGCAGATTACAATTTTGTTAGCTACCTTT
TTTATGGTCGTCTTGAGATGATATTTACATGTCCTTTAGAATTGATGGAA
TTCGTGTTCTTTTTTTAGATGTCCTACTGAGGAAAGTGTTGAAATAATGG
ATTCAAAATCACCATACATCAAACTACTTATACCTGGTATCGAATTTGAT
AACGCCAAGCGTACTGGATTCCTTGTCCGCTGCAAGATTCGAGCATGCTT
CCCACGTGATCCTAACAACAAAGCTATGTGTTTACCACAATGCAATTCGA
ATAAAAACAATAATGGTGACCGAGTTGTTGTAGATACCAATAATAATCGG
CAGAAACGTGAGTTGGCTGAGTTTGGGAAGCGGAGAGCCAGACGCAGTGC
TGTAGAAAGGTTCTATATTGATTTAACGGCGGAAGAAATTGTTGACATGT
AA Coding sequence (CDS) from alignment at sc0000078_pilon:1040876..1044527- >XLOC_001338 ID=XLOC_001338|Name=XLOC_001338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2904bp|location=Sequence derived from alignment at sc0000078_pilon:1040876..1044527- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCGTTTAAATGGTGCTTAATTATGGCTGCATGTACACTTTGTTT
GATACACAGCACAGAAGCAAAACTACATTGTAACTGTCAAGCGAAACGTT
GTGTGAAACCAACAAATTGTAAAGCTGGGACACACAAAGACGCCTGTGGC
TGCTGTGATATGTTATCGTTTAAATGGTGCTTAATTATGGCTGCATGTAC
ACTTTGTTTGATACACAGCACAGAAGCAAAACTACATTGTAACTGTCAAG
CGAAACGTTGTGTGAAACCAACAAATTGTAAAGCTGGGACACACAAAGAC
GCCTGTGGCTGCTGTGATGTATGTGCCAAAGAAGAGGGTGAATTATGTGG
TGGTGAAGAATATAACCAAGGAGAGTGTGGCCAACAATTACAATGCATGG
TCAGACATATTAAAGATAATCGAAATCGTGATAAGAAGACTGTCAGTGAT
TTGATTGGTCGATGCGAATATAGTATGTGCCAAAGAAGAGGGTGAATTAT
GTGGTGGTGAAGAATATAACCAAGGAGAGTGTGGCCAACAATTACAATGC
ATGGTCAGACATATTAAAGATAATCGAAATCGTGATAAGAAGACTGTCAG
TGATTTGATTGGTCGATGCGAATATATTCCATGTCATTACCAATCTTGTC
CATTCGGACAGCTATGTACTATGGTTAAAAATCTCCCGACATGCACTTGT
CCGAAATGCAAAGACATGATTATGTCACCGGTATGTGGCGAGTTGAACGG
TGTTACATATAAGAACGAATGTGAATTGAGACAAGCTGAATGTTTACAAG
GCAGAGAAATAAGAATGACACGTGGACCATGTAAAGTTCCATGTCATTAC
CAATCTTGTCCATTCGGACAGCTATGTACTATGGTTAAAAATCTCCCGAC
ATGCACTTGTCCGAAATGCAAAGACATGATTATGTCACCGGTATGTGGCG
AGTTGAACGGTGTTACATATAAGAACGAATGTGAATTGAGACAAGCTGAA
TGTTTACAAGGCAGAGAAATAAGAATGACACGTGGACCATGTAAAGCTAA
AAACATCAGTCGTGTGGTATGCCGTGAAGATGGGATGAGAATCGAAGTGT
TGAAATCCTTCGTTGGCAATGAACAAATCACTCAAAAACGCTTGACGTTA
TTGGACAGTAACTGTGTCTTCAAAAGCAATGAAACTCATCTCTTTATTGA
AACAAAGCTGAACGAATGTGGTACAAAAGCCAACTTTGCACTAACCTCTG
TTATCTATTCAAACACAATCCGTACAGAGATCGACCCCAATGCGGTGATT
ATACGAAATAAAGATTCCGTACAGATTCCAGTTGAGTGCTTTTATTCAAT
AACCGGTAAAGGGAAAGTTGAAATAGCAAGCCGTGGCAAGTTTGGAGACC
GTATTGAGGAAAGATTACGCGGGAATGGTATCGGTGTCCGGATTAAAAGT
GATAATCAACGGAAATACCGGTCAGCTCAAGAAATGAAAATTTCTTTGGA
CAAAGAATCCAAATACATTGTTGAATTGAAAGCGAAAGCCTTAAAAGTAC
CTGCTCAAGCACATCTTTATCCGAAGTTTTGTTACGCGACACCTGTCGAT
CGTAGCGATCGTTGGATGAGATACACGTTGATTAGAGATGGCTAAAAACA
TCAGTCGTGTGGTATGCCGTGAAGATGGGATGAGAATCGAAGTGTTGAAA
TCCTTCGTTGGCAATGAACAAATCACTCAAAAACGCTTGACGTTATTGGA
CAGTAACTGTGTCTTCAAAAGCAATGAAACTCATCTCTTTATTGAAACAA
AGCTGAACGAATGTGGTACAAAAGCCAACTTTGCACTAACCTCTGTTATC
TATTCAAACACAATCCGTACAGAGATCGACCCCAATGCGGTGATTATACG
AAATAAAGATTCCGTACAGATTCCAGTTGAGTGCTTTTATTCAATAACCG
GTAAAGGGAAAGTTGAAATAGCAAGCCGTGGCAAGTTTGGAGACCGTATT
GAGGAAAGATTACGCGGGAATGGTATCGGTGTCCGGATTAAAAGTGATAA
TCAACGGAAATACCGGTCAGCTCAAGAAATGAAAATTTCTTTGGACAAAG
AATCCAAATACATTGTTGAATTGAAAGCGAAAGCCTTAAAAGTACCTGCT
CAAGCACATCTTTATCCGAAGTTTTGTTACGCGACACCTGTCGATCGTAG
CGATCGTTGGATGAGATACACGTTGATTAGAGATGGATGTCCTACTGAGG
AAAGTGTTGAAATAATGGATTCAAAATCACCATACATCAAACTACTTATA
CCTGGTATCGAATTTGATAACGCCAAGCGTACTGGATTCCTTGTCCGCTG
CAAGATTCGAGCATGCTTCCCACGTGATCCTAACAACAAAGCTATGTGTT
TACCACAATGCAATTCGAATAAAAACAATAATGGTGACCGAGTTGTTGTA
GATACCAATAATAATCGGCAGAAACGTGAGTTGGCTGAGTTTGGGAAGCG
GAGAGCCAGACGCAGTGCTGTAGAAAGGTTCTATATTGATTTAACGGCGG
AAGAAATTGTTGACATGTAAATGTCCTACTGAGGAAAGTGTTGAAATAAT
GGATTCAAAATCACCATACATCAAACTACTTATACCTGGTATCGAATTTG
ATAACGCCAAGCGTACTGGATTCCTTGTCCGCTGCAAGATTCGAGCATGC
TTCCCACGTGATCCTAACAACAAAGCTATGTGTTTACCACAATGCAATTC
GAATAAAAACAATAATGGTGACCGAGTTGTTGTAGATACCAATAATAATC
GGCAGAAACGTGAGTTGGCTGAGTTTGGGAAGCGGAGAGCCAGACGCAGT
GCTGTAGAAAGGTTCTATATTGATTTAACGGCGGAAGAAATTGTTGACAT
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1040876..1044527 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1120-1452:334 |
| Aaloc | 526-1116:1868 |
| Aaloc | 316-522:2466 |
| Aaloc | 160-312:3114 |
| Aaloc | 1-159:3653 |
|
