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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1421829..1424152+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001317 ID=XLOC_001317|Name=XLOC_001317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2324bp|location=Sequence derived from alignment at sc0000078_pilon:1421829..1424152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCGTTGTCTTTTGCTCATAAATTGTATTTTGGTAAGCTTACCATC
AAATGTCTATGGAAGCATATTTGCTGAAGGAGAACTTAAGAATGAACATT
GCCGAAAAACTCATGAATCCATTTCACATTCCCTGGTAGAATGTCTTTTG
AAATGTGATCGAAAACACTCAAATGTTTTGTTCGGTAGAGATAGCAAGAA
ATGTTATTGTGTTTCACCAATTTACGGCAATGGACAGGAAGGCTCAATTG
TTTGCCCATCAAGCAACGAGttgaaatattataaaaatcagagaaaggta
aggacatgtttttttatattgataagTGTAAGTGAAGTTTCCGATATgtg
aaattcatgatattcatgacgtaatgttttctacggaaagaccccggatt
tagccagtagtggcaaatttaaactagacaaaagttgtataaaatttgcc
actactggcaaaaaccggggtctttccgtagaaaacattacgtcatgaat
atcatgaatagagtaGTCTTAGCATACAATAGTTCGCGGTGCTTTAGTCA
CCATTTGTTGCACGGAAACCTGGCGACGAAAATCCGTTTGCTGAATCTAA
TCTTTCCGAGTTTCATTACGGCGATGACTTTTCAGTAACAGATTCTGTCG
ACAGGCCTGACCTACAATACcggccataatatttgagaaaaaaaagggaa
attcccacgaaatcttatagccacaatcgatttggaagagctctaactta
ggttggatGGGTAgcgttttaacatgagacttaagatttaggaccttagg
atctgaggatccaaaagttcaagaacgatcgaatagggctcagaatatgg
cctggaagtctataaaccccacccaaattaaaatattcgattaaatccAA
CAAATAGctcaaaagcgactttctcggccgaactttaaaatgctaaaaac
taGGAACtgaccaaaattctcaatacaTTTTGACCGATATTGTAGCTGAC
AAAGTTGACTACAAAGTTGAATGCGTTCGTATTTGATTGCTTTAGAAATA
TTTAAGCAATAGCAATTACTTTACGCGCACTGGCTTTTGCGGACTCGAAT
TCTCATCACTTTAAAAGCCAGATCCTCAGACTACTATATTTCTTATTTCT
TGAGCTTAGCGTGATAAGGGATATGTTTGTGTTAttagtatttttaaatt
ttttctccaTAGATATGATGTCATAGTTTATTCTCTTTTTATAGATAACT
GGGCAGGATGACAAGAACGGCTCGAAAATAACTCATGAACTTCAAGACTC
ATCATCGACGACAACACAGCCTTCAACGTTTTCCTAAACAACAACCACTC
AAACACAAACGACCGTTTCCACAACTACAAACATATCCTACGACCCCTAC
GACTACCATTCCAAAGACCacaactacaacaaacgacgactccaactaca
acaacgacgacgacaaacgaccattcccacaacgaccatcacgacCATTC
ccacaacaacaacgaccataCAAGACTTCccaacaactacaaaacgacca
ttccacacaaccacaacgacaacaaactacacaacgaccccacaatacaa
cacaacgaccatccccacaactacaacgaccatccccacaacTACAACGA
CCATCCCCACAACTACAACGACCATTCCCACAACTACAACGACCATCCcc
acaacaacaacgaccattTCAACGACTACAACGACCACTGAAGAACGTAA
GTCTTATACTTTTTAGCTCAGCATCATTGAGACAAATGATACCTTACCAT
GTAGCTCAATCTCAGTTTTTATTACCTGACTGAATCTGTTGATGAATTTC
TTGAAACATTTCTTCGTTCAGAAACCGATTAGAGGGCAGCAAGCAACTTT
TTCATCGAAGTGAAACTTTTTGCgtgtttcagttttcaaatgtttcatat
ttaatgaaaaatgcttCAAGTGGCCCCGGACCTTTAAAGATGACTTTAGT
TTCCTATGTTGGCTAATAAGAATGATCGACATagtaataaaattttgata
catttttttgtattcttttttaGCCATTGATTGTCCTCTTCAAGAAAACG
TTGGTATTTCAAGTAACGATGGTAGTGAAGGCGTGAACGCTCAATCAAAA
AACGAATGTATTAGAAAATGTTTCgacaaaagaaaaaacgatCCTGACTA
TCAAAGTATGATGTATTACTTTGACACATCAAATATAGCTTATTGTGTCT
GCAATAAAGGCATAACACTCGTTACAATTTTGCCAGGGAATATTAAGAGT
GTCACCAGTTGTATTTATGCTTGA Coding sequence (CDS) from alignment at sc0000078_pilon:1421829..1424152+ >XLOC_001317 ID=XLOC_001317|Name=XLOC_001317|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1844bp|location=Sequence derived from alignment at sc0000078_pilon:1421829..1424152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCGTTGTCTTTTGCTCATAAATTGTATTTTGGTAAGCTTACCATC
AAATGTCTATGGAAGCATATTTGCTGAAGGAGAACTTAAGAATGAACATT
GCCGAAAAACTCATGAATCCATTTCACATTCCCTGGTAGAATGTCTTTTG
AAATGTGATCGAAAACACTCAAATGTTTTGTTCGGTAGAGATAGCAAGAA
ATGTTATTGTGTTTCACCAATTTACGGCAATGGACAGGAAGGCTCAATTG
TTTGCCCATCAAGCAACGAGttgaaatattataaaaatcagagaaagATG
GTTCGTTGTCTTTTGCTCATAAATTGTATTTTGGTAAGCTTACCATCAAA
TGTCTATGGAAGCATATTTGCTGAAGGAGAACTTAAGAATGAACATTGCC
GAAAAACTCATGAATCCATTTCACATTCCCTGGTAGAATGTCTTTTGAAA
TGTGATCGAAAACACTCAAATGTTTTGTTCGGTAGAGATAGCAAGAAATG
TTATTGTGTTTCACCAATTTACGGCAATGGACAGGAAGGCTCAATTGTTT
GCCCATCAAGCAACGAGttgaaatattataaaaatcagagaaagATAACT
GGGCAGGATGACAAGAACGGCTCGAAAATAACTCATGAACTTCAAGACTC
ATCATCGACGACAACACAGCCTTCAACGTTTTCCTAAACAACAACCACTC
AAACACAAACGACCGTTTCCACAACTACAAACATATCCTACGACCCCTAC
GACTACCATTCCAAAGACCacaactacaacATAACTGGGCAGGATGACAA
GAACGGCTCGAAAATAACTCATGAACTTCAAGACTCATCATCGACGACAA
CACAGCCTTCAACGTTTTCCTAAACAACAACCACTCAAACACAAACGACC
GTTTCCACAACTACAAACATATCCTACGACCCCTACGACTACCATTCCAA
AGACCacaactacaacaaccacaacgacaacaaactacacaacgacccca
caatacaacacaacgaccatccccacaactacaacgaccatccccacaac
TACAACGACCATCCCCACAACTACAACGACCATTCCCACAACTACAACGA
CCATCCccacaacaacaacgaccattTCAACGACTACAACGACCACTGAA
GAACaaccacaacgacaacaaactacacaacgaccccacaatacaacaca
acgaccatccccacaactacaacgaccatccccacaacTACAACGACCAT
CCCCACAACTACAACGACCATTCCCACAACTACAACGACCATCCccacaa
caacaacgaccattTCAACGACTACAACGACCACTGAAGAACCCATTGAT
TGTCCTCTTCAAGAAAACGTTGGTATTTCAAGTAACGATGGTAGTGAAGG
CGTGAACGCTCAATCAAAAAACGAATGTATTAGAAAATGTTTCgacaaaa
gaaaaaacgatCCTGACTATCAAAGTATGATGTATTACTTTGACACATCA
AATATAGCTTATTGTGTCTGCAATAAAGGCATAACACTCGTTACAATTTT
GCCAGGGAATATTAAGAGTGTCACCAGTTGTATTTATGCTTGACCATTGA
TTGTCCTCTTCAAGAAAACGTTGGTATTTCAAGTAACGATGGTAGTGAAG
GCGTGAACGCTCAATCAAAAAACGAATGTATTAGAAAATGTTTCgacaaa
agaaaaaacgatCCTGACTATCAAAGTATGATGTATTACTTTGACACATC
AAATATAGCTTATTGTGTCTGCAATAAAGGCATAACACTCGTTACAATTT
TGCCAGGGAATATTAAGAGTGTCACCAGTTGTATTTATGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1421829..1424152 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 676-924:2076 |
| Aaloc | 487-672:1560 |
| Aaloc | 436-483:1381 |
| Aaloc | 409-435:1353 |
| Aaloc | 298-405:1245 |
| Aaloc | 1-297:1 |
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