XLOC_000338 (mRNA) -

Overview
NameXLOC_000338
Unique NameXLOC_000338
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000306_pilon:384966..386346+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000338 ID=XLOC_000338|Name=XLOC_000338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1381bp|location=Sequence derived from alignment at sc0000306_pilon:384966..386346+ (Clytia hemisphaerica_ch_hm2_pilon)
GATCCAAATGAAATTTACCGCAATCCAGTGACGTCATCACAAGAGTATGG CTGGTGGAGACAAGATGGTGCACCTGAGAGCTTACCATGGACCAAGGTTC CCAATAGTAGTGCAAGAACCAACAGTGAAATGACGAGGTATATGGTTTGA TTATGCTACTCAACCTGTCTACTCAGCTCCCAAACATTTCATCTTCCTTC AGTAGTGCGGTTAATTCTGGAAAAAGCAGTCTTTATCCTGACGTTtaccc ttattggaactaattttcgcgggttttaattttagcgtttttcgcggttt ttcgtcaaaatcgcgaaaatttaaacccgcgaaaaaatttgagagtcgaa aaccgcgaaaattaattcccgcgaaatacaattttttccaattttatcga aaaatttggaaaatccctaggaaaatgaaagaaatttgtccaaaaaaagg caaaaccgcgaaaattaaaacccgcgaaaattcctgaatggaaaaaaccg cgaaaattaaaacccgcgaaatgcaatttttcggaaattttttttcgacc gcgaaaattagttcccgcgaaaattagttccaataaggtagtagATCGTC GCTTATACGAacttttgaatctttctatgtttggaactaatttttagtCC CCGTCAAGGGgggaaaccctcttaaaataccttctatagttcgaatcact ctgtaattcgaactaataaGATTCCtttttcgagttcgaattagcgggAG TCAAATGTAAAATTGCTACCTCGGTAGCTGCAACCAGCAAATCTGCTCCa catatgtgactccccaagtgATTTTGAGTACCTGAAAATTCTTGGAACGG AATCAAGAGCAGCCTAATAGtgatcaaatatttttaaactttcagaccat tagaaaatctaattttgaCCAGTCCTGACCGCTCAAGGACGCTCGTGGCT GCTTGTTTGACATGTCTCGGTCGTTCGTTAAGGTTTGAATATAAAAACCA TCTGAGAATATATAAGTGTAGGTTTAGCTTTTGAGAAGATGTAACTTTTT TGAACTATGGTATAATTAATTGATACAATCACAATGTATAGAttggggat gagctggagttttacaagatacttgtctaattggtcatttaaagtgatag agatgacgcgttctttagaaaaagtaataagattcttttattacatctta acgaccaaccaaatcaaataagagcttgtaaaaattcCAGCTTGTCCCAT AGATTGAGGTGTTTTAGGCTCTATGTTTGCAATGTTGTGGTACCTATTTT GCATTATAACGTAtgattttccttatttttaggtTCGTTGACGAAATGAC TTtgacaaacaaacatttcacattattttaa

Coding sequence (CDS) from alignment at sc0000306_pilon:384966..386346+

>XLOC_000338 ID=XLOC_000338|Name=XLOC_000338|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=372bp|location=Sequence derived from alignment at sc0000306_pilon:384966..386346+ (Clytia hemisphaerica_ch_hm2_pilon)
GATCCAAATGAAATTTACCGCAATCCAGTGACGTCATCACAAGAGTATGG
CTGGTGGAGACAAGATGGTGCACCTGAGAGCTTACCATGGACCAAGGTTC
CCAATAGTAGTGCAAGAACCAACAGTGAAATGACGAGGATCCAAATGAAA
TTTACCGCAATCCAGTGACGTCATCACAAGAGTATGGCTGGTGGAGACAA
GATGGTGCACCTGAGAGCTTACCATGGACCAAGGTTCCCAATAGTAGTGC
AAGAACCAACAGTGAAATGACGAGgtTCGTTGACGAAATGACTTtgacaa
acaaacatttcacattattttaagtTCGTTGACGAAATGACTTtgacaaa
caaacatttcacattattttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_000338XLOC_000338-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306_pilongenomesc0000306_pilon:384966..386346 +
Properties
Property NameValue
Aaloc511-558:1334
Aaloc373-507:1