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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:384335..392956+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000325 ID=XLOC_000325|Name=XLOC_000325|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8622bp|location=Sequence derived from alignment at sc0000135_pilon:384335..392956+ (Clytia hemisphaerica_ch_hm2_pilon) TTTAgtacaaaaataacaatatacagaaataaaaaaataaaagaaataat
ggaaaGTTGGGAGGAAATCGAACAAGCTGCAGATGATGGGCGCCATGAGC
TGCATTTAAATGGTGACGTCATCTCAAGCAAACTGGAacgaaacgagatg
aaattacCTAACAAACTTTTTGAGCTCGTTGCGTTGAATTATTTGGAGAT
TTCAGATACTTCTCTTATTGAGATCCCTGATGATATGGCGAAATTAACAA
ATCTTATCAATTTGGCTTTACATAGGAACAGTATTGAAAAAGTTGGAGAT
TTCTTTAATCATTTACCGAAGCTGAAATTCTTTGATATGTCTTTTAACAA
ATTGACAAGTCTACCAGAGCAATTAAATTTAGGTACTGTACACACGTTGA
ATTTATCTAATAACGAGTTGGCGTCTTTAGGTGATCTAAGTGGGGCTGTT
AATCTTAGTATTTTACACATAGAACACAATGAGCTAGAAGAATTACCTAC
AGGGTTAGTCACCTTAAAACATCTATTAGAAGTGCACGCCAGCAATAACC
TAATAAACACCTTACCTGACGATCTACACACTTTTCCCGCGCTGAAATTA
TTTGACGTCTCCGAAAACAAGTTGAAAGAAGTACCACACTCAATGTCTCA
ATGCCAACGTTTGAAGACGCTCAAACTTGAAGGGAACCCCCTGAAAGATA
ATCGATTACGTAAGATGACAACACAGTGCAATACTAGAGCTATACTGGAA
TACATTGCCAAGCAGAGTGGTGGAGACGGGGGTaagaagggcaaaaaagg
aaagaaagggaagaatcaaccggttaaggaagaagcagaagagaaCGTCA
GACGTATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATATGT
GACGCCTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATAAA
GAATCTTGACCTGTCGGATGAAACTGTCTTCAAAAACTTCTTATCCCTAC
AAGTAtgaattttatttacttttatcccttcctatttttcttctttaaag
aATATAGCtgcatgcttttgaaaattagattttaaaaacTCGAAGCCAAT
TGCGAGATTAATGCTTATTTCGGtgagttttttttaaactttcataaTTA
ACCAATTAGCTTTCTCCGGAGATAGCTGTCACCAAAATTCCCCTAACGTT
TACCTAATTCAATATTGGAGCTATTAGGTTTCGTAAAAGTGGTAACTGGA
GTGATCGTGATCTGCGGATAAATCTCAGATCTTCAAACTGGAGCTTACTT
AATACAACATTTTATCGCAAAGTCATTTGGTTCATTTGACGTTATTAGac
aggtacgagccgggaagtatcttatccatttggtggactaactttcttgg
ggtttttcttgttccttatgtTAATAAGAAtgttttaagcttctgggcca
cctggatttctcacctgggtatccataatggcggatttttggtcatgtga
cccccgtaggcaaaactgaaaattcttccaacccgaatataggcatatca
tatatcaatcgatcggaaattcgatactgattaattttgagatacaaagt
tgaGTCTGAAAACTTTTctatctcgagatataaatcactttcgttttctc
aggtttggctgcagttgtaggcgggctttcatggagtgaggcaattcttt
tactcatatctcaagaaatatgcttttaaacatatcaaaactttatgtgc
tcctagaaaaggcattaaaaattgtttgtgcaaattttcaataagtttgc
agtaaaaatgtgtattttacagaccagagtacaatttccttaccgttgaa
aaaagatctttttctctcaTAATTagcctttttgtctgaaatgaatgagt
GAAATGTTTCCCAATAGGGTTTAAAACCAATCACTTATTCGTAATCTCAC
TCAGAGGGGTACTTAGCAACAAGTAAGGGCTAAATGTATCcggtcagcac
tttataagtACCTATGATTTACGGTAAGACATGATCCCAAAAacggtgaa
atttccaaataattaatgaaaaattctctCATTGCATCTCAACATTAAAC
GAGAACCTTCTGTTCTTTAGATTGACTAATGCAAAGAATTATGAATAATG
TAAATCGTTACAGTGTGTatttttacagaccagatttaagTGCTTCTAGG
AGCTTGTCTTGTTCTAAAACGCTTTGGATTACTACAGAAATTCGCGAACT
TGAGAATTTACTGAGTTAATCCGTCAAAATTCGCCAATTCCTTTATCTTT
ATTGTTCATGCATGAAACGAGATTTAGAGGGCTTAGAATCTGTGTTGTCT
GTAGGGCCAAAAAATGTCGGCCTAATATGGCTTCGAGAGGCGATAATCCT
AGGCCATTGTAGGAAGCCTAGTGATGGAGCCATTTTTGTGAACCTGCTTG
GGGCTATTCTGGTTACTGTTACAATTATAAGAGGCGTATAATGGTCCAAT
GCATCATTGTATATCCGCTTTAACTACATGAATGCAACACAACGCCTTCA
GCTAGTTGAATAAGTCAGACTGTgggaattttaactaaaagcaCTTTAAA
GAAGTTATTGCCATACAAAATAATGCTTTAAGCTACATGTCCAAAATATC
CccgttttcttacaaaaatcttaGTATAATATTAAGCaatcttgatttta
aaattcttatttgtttCGGACATGGCTTGCTGATGACGGTGATCCCATTT
TCCTTTCCCCTCATGAGGTTTTGTCAGAACATGAACAAACGACGGGACAT
CCTTCTCCTTCGTaagcactgctagcttcgttgccgcctcgttaaaacat
aaaatgaaacaataggttTTGATGATCtaccttgggaataccttgctaac
aacgtcaaaacttacacaaagtctctgttgttctactcttctccagtctt
ttatctatatcataacaaagataacagatgcGAAATCATCGTCATTTTTC
TAAACTCCGATGAAATAATATCGAGTATATAGGATTGAGAGCAtaggatt
caaattatgatattcttatgacacaggctcacAACTTTGGCatacctttt
ttttttcaagtcaataaaaaaactaattggaatgacaaaagtgattcaaa
agtatacacacagttgaaattctccatttcagcgtataaaaaaaattgaa
aataattattttgtgacTTGAGAgaaactagccgtatgcgcagcgtcgca
cgctgcaTGTCCCAATCCAGCAAATCACATCTaaaaaaaaCCCAACGGAA
AAAGGATTGCTGCTGATTGatgataagattttgattttataaaagaaagg
agaaaaaagttcaacgccatgaagaggaggctttgtagagctttgttaga
ttttcgaaaactttttataaaacgttgtaaacacacacgttttagcatat
taatatatagattttcaaactatcaagctatctatcaatcattttaccta
agtaattcaaagaaatagcaTTGTGATGGAATATCAacggattttttata
ccaattttaaaatacaggcGGCTACAAAGACACCatggaagatagacgtc
cagttatGATTTATCCCATGTGAAGGTGCAGTAGTGTACCAAGTATTGAC
CGTCGTCTAGGAGATCAGGACTAACTCCAACTCGGTGCTGTGTTTCactt
aatgaaaagtaaatgctACTTTGCTAGgaccaacccataccatgtgatgg
TCGTAGGGTGGACAGAAGTCTCAAAGACAGGCTACACAGATTTCTCGTTA
CatgcatgaataataaagatataggaaTTAGAGGATCTTGACGGATTTTA
CTCAGTAAGATTCTCCAGCTCCGGATTTTCCATGGTAAGTCTAAACATTT
TAGGGTAATATAACCACCTAGAAGCacttaattctggtctgtaaaataca
cacagcGATTTACATGTATTCTTGATTCTTTGCATGTGTCAAACTAAAGA
ATAAGGTTCAACTTTGTTTAATGTCGAGATACAATGAGAGACTTTGTCAA
ATATTTGAGTAATAGCTTGGAAGTTTCACCGTTTTTTGGatcaaatctta
ccaaaaaaaCATACTGATAAAGTGCTGACCAGACACATTTAGCCCTTATA
TATTTCCCAGGTACCTCTCGAATATAATATGAAGAATCGAGTGGCTCTAA
ACCTTATTAAGCATcattttactaattcatttcagacaaaaaggccaatt
ttgagtagtctagcaagctagaagactaattcagatatagtagaaataaa
acaaaaagtaatggagggaacaaattttagtcgtctagaaacctttgtgc
aagCCAAAAGCTTCATATTAATATTGCTTTGCTAttgttaatgaaaaaaa
aatctagggGGCTTGTTCGGaaaaaaacggtttgttttgatttcgtaaAT
CGATTTAATTGGTTTAGAAAAAACAATCGAGACGCACACCATTGGTCGAA
ATACATAAAAAGAGAAATCAGAACACACAACAATTTTCTTtctcgaaaaa
tttttctcgtTTGTTTTaaactaactccaaacaaaagaaaagtgtcatgt
caatattgcaattataatttttcttcccgctcaaaaaaaattttctttaa
aaaaaaagtgtgttgatttgttgtgtgttaaattttattttatttttcgt
ctttcattttgttttgagagtttgttgttgcttgatcaaaaattaatttc
tccTTACCTTTCGCGCGCCAAATTCTTACGGAAGCACCCCTGTCCGAGAA
aagctttcttttgttttcagaaaaaaccctttgttttctcgctacgcaag
tttctgcgtagctagccggggattctataaggccggaacaccggattctt
ccagtcgtttatacaaactaatattatcccgtaacaattatcgtattatc
atataacgcctatactactgtattacacgcattataaacgactccagtct
aaattttgagaaaaaaagatcttttttcgacggtaaggaaattgtactct
ggtctgtaaaatacacatttttacttcaaaatttttgaaaatttgcacaa
acaatttttagtgCCTTTTCTAAgagcacataaagttttgatatgtttaa
aagcatatttcttgagatatgactaaaagaattgcctcactccatgaaag
cccgcctacaactgcagccaaacctgagaaaacgaaagtgatttatatct
cgagataggaaagatttcagacccaactttgtatctcaaaattaatcagt
atcaaatttccgatcgattgatatatgatatgcctatattcgggttggaa
gaattttcagttttgcctacgggggtcacatgaccaaaaatccgccatta
tggatacccaggtgagaaatccaggtggcccagaagctcaaaatattctt
tttaccataaagaacaagaaaaaccccaagaaagttagtccaccaaatgg
ataagatacttcccggctcgtacctgtCTATATTCACTGGGTCCGTGCTA
ATTATCAGTGTACCTCAaggcagtgccgtagcaactgggggggcaagggg
ggggctatgcccccccaataattttttcaaaaatggttattttgcaaaat
gcaaagtttttcttttttaatttgtcataattgtccttatgtgcatgttt
tgagtgtatttttaagcaatctagagctcaaattttcaaaatttcccccc
tcgggccaaaccatggttggcccttgcggtgtcactaaacttcagccccc
ccaatatgaaaatgcttcctacggcactgcctcaaggaaactaattttag
cgggaactaaatttcgcggtcgaaaaaaaatatggaAGAAATGACtttgg
aattaattttcgcggttttgccctattttggagattattttttattttcc
gagcgtttttcaaatttttcgatggaaaatggtcgAATTTACGGAAATTA
GTTCTtgcgaaaatttgttcccttaaggtaactgAAAGTTTGACAAAAGT
GATGCTAAAATCAGGTTTAAATTATATTTCTCTTTCTTTACAGACGAAAC
TTCACGAGAATGAATGTGACATGCGCACACGTGCTACCATTGCAACCCAT
AATGCAACAGGATTGAAATTCCCGCTTGTTTTCAAAGCTTCGCATGTGGG
TCAGACTGTCATCCATGCATTAGGGAAAAAGAAACAATGCAATGCGACAA
CATTGATACAGAATCTGAAAGATGAAAGAGATGCATTGAagcagaaaaag
aaaagacaacCGAAAACTGGATTGTACAAGTAAGGGATATTCATTCTCTC
GAGACCTATTTCATATAACAGATGCGAAAGGTTGCTTGACAtttttttGT
GAAGTGTAACGGATGTTTGTTGATTTGAGGAGTGAGCGAAAAATATCGAA
GAAATTCTCAAATACCTATTCATGACATTTGACAACCAATAGGGGGCTTA
CCTGAATTTATCAACAAGGACTCGTTTAGCCTGattcgcagacctctaca
aaaccgcagatAGTATAAGAGCACGAATCCGTCAggggatgccagcagcc
taggatTTATGTTTTAGTAGATCTTTATGATCTAATGAAGTGGAGCGTAT
AAAGGTAGAGCATTCgtctacggtgcgcaaggtcgcGGGTTCAATCCTCG
GTCTGATCATAACCAAAGACTTCGTACACTGTACAAAATGGTACTTAAGG
ACTCTCTGCTCCttactcagcaattaagagaaggagtATTAAGAGTGGAA
CCCTACCTACCTTCGGATAAATAACTACCGAAAGATGAGTGCTCAGGTCG
CTGCCGTCTGTGGTTGCAAGCCTTACTTATTATAGATCTCTAATCAATTT
GTTTCACTTTCTTCTGAAGGTTTATTGAACTGGTGGATGGACAGGAGATG
ATAGCTTCAGTTCGAAATCAAGATGGTGACGTCATTTCGTTGCCTCCGAT
CACTAATGGTGAAAAAACcaaggtattttttttttccgatACTAGTATAG
TACCTGTTTCAACTTGATAAAGGCAAACCGTCGAGACGTCGAATACAAAA
CTGTGTGTTTTTAATGTTCACCTTTTCCTGCTTTAGATAGAGAGAGGAGA
acctatttttttttctcgattcaGATTTTACCAAAATCTCAGTCAAAACT
TCTGGAAAtcatttaaattgatttttcctAACTTCAAGATGTaaaaaaaG
GTACACTTATGCCTCGTTACGCAGCGTCCTTCCCCTCAtgagtttttgga
cctacttcggagttcgtccgtccgtctgttaccagcttttctctaGATTG
GCTcatcagttttttctgatttttagcacaaggatgcaaaatggcaatgc
ccaaaatgtgacggaacccgattttcgaaaaaaaaaactttccaccggaa
aaactgttttttttgttttttttcgagattttattttttgctcaaagatg
cgtattaacaatgccctaaacatggccgagtccgatttttgagaaaaatt
tttttccggccgaaaatgccggaaatatgccggaaatcgctgtttttctg
gattttcattggatttttttcttaaaattgcttgttttttcattcaaaaa
cattattaatagcaatgcccaccatcaagcatgttttaattttcaaaaaa
tttgatttttgaagccggaactattcaaaaatcgccggaacaacctattt
tcgccggaaagacagtatttcttgaatttaatGAGCTGtgcttaatattt
tttaattaaattttgcacactgatgcaaaatgacaatacctaaaatgtga
cggagcctgattttcgaaaaacatttttttctggccgaaaatgccggaaa
aaccggttttgtctgattttttgcagaaagatgcgtattcgcaatactaa
aaacatgaccgagtttgttttttttgagaaaaattcttttccggctgaaa
atgccggaaatatgctggtAATTACTGTTTTTGCAGATTGTCATTTGACT
TTTCCctcattctttgttttttcacacaaaaacatttgcccaccattaag
catgattaaattgtcaataaaactgatttttgcaactgGAACTTgctatt
tctattttttccctactccccttccctcttcccccatcaacaatcaatta
taaaattgaatgtgttatgcatttttgcaaaacgctatatcgtctgactg
attgttttcatttttctccttattgctatctagctttcatcatcaggtag
gtccattcagcatgttgcttgttgaaATATTTAGACTAGATTTCATAatt
attccctttttttcttttccctaCAGATCGGTGCTTCAGTTGGTGATGTT
TTCATTGAAATATCATCACCAGTCAGTATCGCACAATGCAAGTACGTTAT
GGAAGAGTTGATCAAGAAAATGTTCCAACAGAATTTCAACTCTGACATGG
AGGGTGATGAAGGGCTTTGGATTGAACCAATCAGAGTTgtggatgaaaat
gaagatttgagAATAGTTTATCCCTCTAAAATTGATAtcgatttttcaaa
tattccaGTCAAACGACTGTGA Coding sequence (CDS) from alignment at sc0000135_pilon:384335..392956+ >XLOC_000325 ID=XLOC_000325|Name=XLOC_000325|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3174bp|location=Sequence derived from alignment at sc0000135_pilon:384335..392956+ (Clytia hemisphaerica_ch_hm2_pilon) TTTAgtacaaaaataacaatatacagaaataaaaaaataaaagaaataat ggaaaGTTGGGAGGAAATCGAACAAGCTGCAGATGATGGGCGCCATGAGC TGCATTTAAATGGTGACGTCATCTCAAGCAAACTGGAacgaaacgagatg aaattacCTAACAAACTTTTTGAGCTCGTTGCGTTGAATTATTTGGAGAT TTCAGATACTTCTCTTATTGAGATCCCTGATGATATGGCGAAATTAACAA ATCTTATCAATTTGGCTTTACATAGGAACAGTATTGAAAAAGTTGGAGAT TTCTTTAATCATTTACCGAAGCTGAAATTCTTTGATATGTCTTTTAACAA ATTGACAAGTCTACCAGAGCAATTAAATTTAGGTACTGTACACACGTTGA ATTTATCTAATAACGAGTTGGCGTCTTTAGGTGATCTAAGTGGGGCTGTT AATCTTAGTATTTTACACATAGAACACAATGAGCTAGAAGAATTACCTAC AGGGTTAGTCACCTTAAAACATCTATTAGAAGTGCACGCCAGCAATAACC TAATAAACACCTTACCTGACGATCTACACACTTTTCCCGCGCTGAAATTA TTTGACGTCTCCGAAAACAAGTTGAAAGAAGTACCACACTCAATGTCTCA ATGCCAACGTTTGAAGACGCTCAAACTTGAAGGGAACCCCCTGAAAGATA ATCGATTACGTAAGATGACAACACAGTGCAATACTAGAGCTATACTGGAA TACATTGCCAAGCAGAGTGGTGGAGACGGGGGTaagaagggcaaaaaagg aaagaaagggaagaatcaaccggttaaggaagaagcagaagagaaCGTCA GACGTATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATATGT GACGCCTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATAAA GAATCTTGACCTGTCGGATGAAACTGTCTTCAAAAACTTCTTATCCCTAC AATTTAgtacaaaaataacaatatacagaaataaaaaaataaaagaaata atggaaaGTTGGGAGGAAATCGAACAAGCTGCAGATGATGGGCGCCATGA GCTGCATTTAAATGGTGACGTCATCTCAAGCAAACTGGAacgaaacgaga tgaaattacCTAACAAACTTTTTGAGCTCGTTGCGTTGAATTATTTGGAG ATTTCAGATACTTCTCTTATTGAGATCCCTGATGATATGGCGAAATTAAC AAATCTTATCAATTTGGCTTTACATAGGAACAGTATTGAAAAAGTTGGAG ATTTCTTTAATCATTTACCGAAGCTGAAATTCTTTGATATGTCTTTTAAC AAATTGACAAGTCTACCAGAGCAATTAAATTTAGGTACTGTACACACGTT GAATTTATCTAATAACGAGTTGGCGTCTTTAGGTGATCTAAGTGGGGCTG TTAATCTTAGTATTTTACACATAGAACACAATGAGCTAGAAGAATTACCT ACAGGGTTAGTCACCTTAAAACATCTATTAGAAGTGCACGCCAGCAATAA CCTAATAAACACCTTACCTGACGATCTACACACTTTTCCCGCGCTGAAAT TATTTGACGTCTCCGAAAACAAGTTGAAAGAAGTACCACACTCAATGTCT CAATGCCAACGTTTGAAGACGCTCAAACTTGAAGGGAACCCCCTGAAAGA TAATCGATTACGTAAGATGACAACACAGTGCAATACTAGAGCTATACTGG AATACATTGCCAAGCAGAGTGGTGGAGACGGGGGTaagaagggcaaaaaa ggaaagaaagggaagaatcaaccggttaaggaagaagcagaagagaaCGT CAGACGTATCGTGATCACTCCGAACACGGATGATGAGAAGCGTGTCATAT GTGACGCCTCCGTGAAAGACGTACGCCCGTATTTGTGTTGCACCGTCATA AAGAATCTTGACCTGTCGGATGAAACTGTCTTCAAAAACTTCTTATCCCT ACAAACGAAACTTCACGAGAATGAATGTGACATGCGCACACGTGCTACCA TTGCAACCCATAATGCAACAGGATTGAAATTCCCGCTTGTTTTCAAAGCT TCGCATGTGGGTCAGACTGTCATCCATGCATTAGGGAAAAAGAAACAATG CAATGCGACAACATTGATACAGAATCTGAAAGATGAAAGAGATGCATTGA agcagaaaaagaaaagacaacCGAAAACTGGATTGTACAAACGAAACTTC ACGAGAATGAATGTGACATGCGCACACGTGCTACCATTGCAACCCATAAT GCAACAGGATTGAAATTCCCGCTTGTTTTCAAAGCTTCGCATGTGGGTCA GACTGTCATCCATGCATTAGGGAAAAAGAAACAATGCAATGCGACAACAT TGATACAGAATCTGAAAGATGAAAGAGATGCATTGAagcagaaaaagaaa agacaacCGAAAACTGGATTGTACAAGTTTATTGAACTGGTGGATGGACA GGAGATGATAGCTTCAGTTCGAAATCAAGATGGTGACGTCATTTCGTTGC CTCCGATCACTAATGGTGAAAAAACcaagGTTTATTGAACTGGTGGATGG ACAGGAGATGATAGCTTCAGTTCGAAATCAAGATGGTGACGTCATTTCGT TGCCTCCGATCACTAATGGTGAAAAAACcaagATCGGTGCTTCAGTTGGT GATGTTTTCATTGAAATATCATCACCAGTCAGTATCGCACAATGCAAGTA CGTTATGGAAGAGTTGATCAAGAAAATGTTCCAACAGAATTTCAACTCTG ACATGGAGGGTGATGAAGGGCTTTGGATTGAACCAATCAGAGTTgtggat gaaaatgaagatttgagAATAGTTTATCCCTCTAAAATTGATAtcgattt ttcaaatattccaGTCAAACGACTGTGAATCGGTGCTTCAGTTGGTGATG TTTTCATTGAAATATCATCACCAGTCAGTATCGCACAATGCAAGTACGTT ATGGAAGAGTTGATCAAGAAAATGTTCCAACAGAATTTCAACTCTGACAT GGAGGGTGATGAAGGGCTTTGGATTGAACCAATCAGAGTTgtggatgaaa atgaagatttgagAATAGTTTATCCCTCTAAAATTGATAtcgatttttca aatattccaGTCAAACGACTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000135_pilon | genome | sc0000135_pilon:384335..392956 + |
Properties
| Property Name | Value |
| Aaloc | 1342-1587:8377 |
| Aaloc | 1240-1341:6921 |
| Aaloc | 1003-1236:6094 |
| Aaloc | 1-1002:1 |
|