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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:398068..401928+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000324 ID=XLOC_000324|Name=XLOC_000324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3861bp|location=Sequence derived from alignment at sc0000135_pilon:398068..401928+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTACACGCATTTTTGGCATTCAAGTTGAAAAAGATAAAAGTCAATG
TACATCGAGTGACCAACAGAAATTGAATCAACTTGGTTCTGCGCATGTTC
AAGAATACATAATTACTAAAGGTATGGTTCATTGATTCTTCAAATGTCAA
GTTATTACCAAAACACCCCATGGCCCTCGGGGCGTCGGCCTTTTTTCCAG
GAATTCTTACCAAATTGACTCGAAATGGTTTTCTCCTTTGCCCAACTAAA
GCCACCAAAGTTTCTTGAAATCTGAAATCTCTAACCTCAAGCCGTGGACC
TTGTACCCTGCTTTTTAGCGATTCTGGGAATTAAAATCTATCTCGTCCTT
TTTGCTATGGTTTATCTCAAACATCATTCTGCTTAATAATTTGACACTTA
AAATGAGattaatttaaattaatttaacCGTCTTAACCCGAGTGATACAC
TAATATATCCAGTCCTAAACTTaaggtcataactcctgaccacttttAGA
TGCATTAATGTAATCATCTCTATATCTTTTCAAACTCTTTCTCCTCTTTC
ATAGGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCAT
CCCAGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTT
ACGAACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTAC
AACAGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTG
CGAAACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTT
ATGACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACA
CATGAATGTTCTCGTAAGTAAAAATGATCTTCTTAAAAGCTCTTATTAAA
TCTCATATATTCTTAACAACTTCTTGTCATATTTTTGGAACTTATTTGCA
ATTTGGTATACGGTTCTTGAAATTTAAGTAGATTTTGGGAGTTGCGAGCT
CTCATTCAGAGTCTGAATGATGGACCAATGATGGGTAGTTCCTATCAAAT
ATTGAACTGGGTTAGTATAGACAACCTAGCAACAAAATTGAAGATATTGT
GCATTTTTGAGAACACATATTTTATTGCAATCTTTTAGAATGGACACAAT
GGACTTGTTTCGAATCTTGCCGAAGCAACCTCCAACTCAGACAACGAAGA
CAACGTACCTGCTCTGGCTGTTCTGGTAAAACGTACGTAGAAAGATTCGT
ATCTGCTGGATCCTGCCCGCCTGTACCGCCCTGCTATAGtaagtttttta
agatttttaagattaactttttaTACTGCTTCTGCATCGGAGGCTAGCTA
CTGTTTTTACTATTTGAAGCTTTTCCAATTTCTTCTAATAAAAACTAAAG
TAAATTGAGTACgtttatattgaattttttcattttcatttttcaaagtt
caaagtttTGAATACCCTGAAATCTCTGCAATGTTTGagttgaatgaatg
aatttcaCAAAAGGACCTTTCGGAAAGATAATACAAAACCTAATCGACAC
TGAAATTACCAAATTACCTACAAGAAAAGGTCACGATTGCCTTTGATTGA
ACTTAACCCTTATTCCTTCTGAACTATGAAAGGTTCATTAACCTTTAGac
accgctgtttttaaaaacagtgcgcgctgctgccgctgtttttttcatga
aaatggaggtttcgcggaaaatgtcataaaatcttaaccgctaaagctta
agtaaaaagtaaacccattttgaaaagctaaggatctattatttcagata
ataccaaaaagatgcctcatcacccttttaaacctgacaccacagcctca
aatcaaaacagtaaaaattccatgtttacgattttttcactttttttctt
ttttttgacaaattgaatgaaaaaagtgggtacaaggtaaggattggtcc
cagaaaaattattttgttttagtttatgttataagccaccattgtgtgaa
atttcagggctgaagaagctcatttcatctcagaatctaagtttcggcga
agcacacttttccaccaaaatcgacactctggccgcaacaggtaaattaa
gtggtcccgttgctctaaaattggcccTACACTTACCCTAAAcctgtaaa
attactacaataatcataacagactctctatcatgtaaattcaagcaata
aaacaccagaatagtgaaaaaactgaggcaaaacagccctgagttgttgg
agctagagataggcatgtatgtcaggaaataccccctaaaaccccttcaa
accacatagaaactgccaataaaggttctctatctcatataatgatattt
atatgctgaaaccaagaaaaaaccagacataaacatgacttttcagtcca
aaaatccatcaaacaccctctgtccaccactaaaacgatgttttgttgac
atttgaaaaatacaccgacattgagttccgatatctcgagatgtataaaa
gcaggacccgtaaaattttgaatgaatgaaccttcacccatatcctgtct
gctaaattttacagaatagaaaaattcaaactggtctttattttattaaa
ctttgaaaggaccccagtatcaaaacgtacgtggtacgtctctcggcctg
tatatatgacgtacgtggtacgtctctcggcgtcTAAAGGTTAacaaaac
ttttcgaaacatatttttttgacGATGGCACCTACTTCTTTTCCTTTACT
AGAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATTTGGACGGAC
ATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGTCCAGCTGGT
AAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACATAATAAAAT
CAGGTTAGTAACAGTCCTTGGTGAcagattttgattgtttcaattgtttt
acaagtatgttttggacacgtgatttttaattgttctctttaacgACGCG
TGGTTCGCGtaattttttactatttttatgtCCCTTTGAGGACGAAATAA
GTTTACCATATTGTGCCAACACGGATATCAGTATTGTTCTCATTTTGAAA
GTGAACTACTAAACTAAACTAATGACTAAGGAAGTGAGAAATTCGAACTC
ATGGCTCTCGACCACGACTTTTCTCCAagcaggctcggatacagagggag
gctataaccaatggaggagagcgtactttattatcgtattaccttatatg
gaaactaattactctccatgaataagagagcctacctcctgtatccgacc
ctgccAAGAGAATGATATCGTTAAAATATCGAAACAAGTTTGTTAAGGAA
GAAAGCCAATTTTGACAAGTTGACATTAGATGGTTCCCTTTGCTGCTGGG
TCTTCTTTGGTCTAACCGGAGAAACTACCCaataaatatctttcaaattt
aACATCTTCTCTAGATATGAATATTACTGCAGTACAATACAATATCCTTG
TGCAGCCAATTACTACAAGAACACTCTCAAGAAAGACAACGGACACGGCA
ACTTAGTTTACCTGGACCGTTTAGATGTCAAATGTAACGGCAATGATTTG
ATGACAAGTCAACGATATCTACGAGCAGGACGAGAAAGTTGGTATCATTA
TGGATGTTGTAGAATACAATACACTCATCAACAGAGATGTCATTACCATT
ATACACCGAAAACTTGGCATAACGGTCCTGGCCATGTCATCTACCTGGAT
CGACAATCTCACAACAAATGTCCAAATAATCATGTGATTTCATCTTTCCA
TTTGATGAGGGCCGATCATACCCATATTCGTTATAAACTTAAATGTTGTA
AGGTAGAGCCT Coding sequence (CDS) from alignment at sc0000135_pilon:398068..401928+ >XLOC_000324 ID=XLOC_000324|Name=XLOC_000324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000135_pilon:398068..401928+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTACACGCATTTTTGGCATTCAAGTTGAAAAAGATAAAAGTCAATG
TACATCGAGTGACCAACAGAAATTGAATCAACTTGGTTCTGCGCATGTTC
AAGAATACATAATTACTAAAGACTGGTACACGCATTTTTGGCATTCAAGT
TGAAAAAGATAAAAGTCAATGTACATCGAGTGACCAACAGAAATTGAATC
AACTTGGTTCTGCGCATGTTCAAGAATACATAATTACTAAAGGATCTAGA
CCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCCCAGTTCCCTT
ACGATTCCAACTATCACCAATCATCAATTTATTCACTTACGAACATCTCT
CTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAACAGTTGGACG
ATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCGAAACACTTGG
CATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTATGACGATTTGT
GCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACATGAATGTTCT
CGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCCC
AGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTTACG
AACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAAC
AGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCGA
AACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTATG
ACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACAT
GAATGTTCTCAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAA
CCTCCAACTCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTA
AAACGTACGTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCG
CCCTGCTATAAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAA
CCTCCAACTCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTA
AAACGTACGTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCG
CCCTGCTATAAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATTT
GGACGGACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGTC
CAGCTGGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACAT
AATAAAATCAGAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATT
TGGACGGACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGT
CCAGCTGGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACA
TAATAAAATCAGATATGAATATTACTGCAGTACAATACAATATCCTTGTG
CAGCCAATTACTACAAGAACACTCTCAAGAAAGACAACGGACACGGCAAC
TTAGTTTACCTGGACCGTTTAGATGTCAAATGTAACGGCAATGATTTGAT
GACAAGTCAACGATATCTACGAGCAGGACGAGAAAGTTGGTATCATTATG
GATGTTGTAGAATACAATACACTCATCAACAGAGATGTCATTACCATTAT
ACACCGAAAACTTGGCATAACGGTCCTGGCCATGTCATCTACCTGGATCG
ACAATCTCACAACAAATGTCCAAATAATCATGTGATTTCATCTTTCCATT
TGATGAGGGCCGATCATACCCATATTCGTTATAAACTTAAATGTTGTAAG
GTAGAGCCTATATGAATATTACTGCAGTACAATACAATATCCTTGTGCAG
CCAATTACTACAAGAACACTCTCAAGAAAGACAACGGACACGGCAACTTA
GTTTACCTGGACCGTTTAGATGTCAAATGTAACGGCAATGATTTGATGAC
AAGTCAACGATATCTACGAGCAGGACGAGAAAGTTGGTATCATTATGGAT
GTTGTAGAATACAATACACTCATCAACAGAGATGTCATTACCATTATACA
CCGAAAACTTGGCATAACGGTCCTGGCCATGTCATCTACCTGGATCGACA
ATCTCACAACAAATGTCCAAATAATCATGTGATTTCATCTTTCCATTTGA
TGAGGGCCGATCATACCCATATTCGTTATAAACTTAAATGTTGTAAGGTA
GAGCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:398068..401928 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 739-1134:3466 |
| Aaloc | 589-735:2755 |
| Aaloc | 439-585:1141 |
| Aaloc | 130-435:557 |
| Aaloc | 7-126:1 |
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