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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:558228..562106+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000318 ID=XLOC_000318|Name=XLOC_000318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3879bp|location=Sequence derived from alignment at sc0000135_pilon:558228..562106+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTTCTTGATAATGATACGGTATGATTTCTCAGTTGGTTCTTGTg
caggaacacttatgtaaaaataagacCTTCAACTAAATGGATGGTCAAGG
GGGTGGATAATTCCACTAGAGACAACAggggggggtcaggatccaAATAA
CCCCAGGGCCgggggtggtgtcaattttttttttcaaattttaaaaagtc
aagttggtatcgataccaaaatgagggggtgggtccccctttttttgaaa
attagggaatctttaagttggtattgataccaaaatgagggggtgggtcc
ccctttttttaattttttctgaatttgaaattggtatctgacttaaaatg
ttgtataatgtaagtataaaaacttatttgaatcaTTTACATTATTATAC
TCTGattccatataaaagcattcttcattctacaattaaaattaaatttt
tatttaactttctctgctctcaatcctttcaatcaaccaaaattcattca
aaactagagttgAACAAACTGAATCAAGTCTTAGCAGATTATTAGAACTT
TTTTAGTCGTGATAGAATTTTTCTGTACATAACGTTCATCATAATATAGG
CTATGTTACAATGCTAATACAATGAGTTTTTTATCTAGTCTAGTTTATCa
actagttttatgaatttgatacattttgccaatttagttcaagaaactta
atttacgttgtgttagaatgagaaaaacttgttttcattttcaggagtcC
AAAGTACATAATATAAGtgacatagcgtcagcctgggttaaggtcccagg
caaaaattaggtgttaagttttaagtccccccaaagatttatgaattttt
tgttagcccccaggacttttaaccctagacactttcaaaaaagttgatcc
agtaaaaaaggttttttccaaaatgtgaATTGTGTTCAGTcctaagttta
agataaaatattttgcacgcTTTCTCTAGAAATATTGCACGGCAggcgaa
aatttttcagattcatgagcttcaatttgagtaaaTGAAGCCAACTacta
agctgaattattttagccccacgttaagtgatgaaattttagctcccccc
aagtacataggtccccccaaaaaagtggtgtacttccagccccctccttt
tttgggaaagatttaaggtgtaacccccccccccaaccagcagggggggC
TGACACTATGAGTGATTAATAagaggaatgttctttgaattAAAACATCC
ACATATTTAGTGTCCTTTGTTTGCAGTATCCTATGCATTTAACCTcttgc
atttttactgattgccaatttaggagggtgggtccccctttttttagaaa
attgggtttttcaagttggtattgataccaatttagggggtggtggtgtc
tactactttcaaatcttgaaaagtcaggtttttgggccctgggttggtat
cctggaccctgacccccccctggAGACAAGGATGTTTTCATCTCCTTTTA
TAGTCAAGGCCAAAATATTGAAAGTTATTTCATTATaatttttaaactaa
attttttttttagtttttgactcAACTGACTTTACTGTTCAACAAAACCA
GAAGTATTGGAACTGTTTTTGTTACAATGAAGCAATGTAAGtttttttAT
ACCCTCAATCGTGgtcgcaaatagaaaaggggatagactccctcactctg
GCTTCCTGACAGCCACCAAATGATTATACTTATACTTAGTTACTTATACC
TTTACCTATACCATCAATTGGAGTATCTTGTTTAGGGGTATATAAGGAGT
GTCTCCTTAAAGTATTCCTTTGATCTttattttgctatattttttacCTT
TAAATTTGGATGTCATTCTTGTTATTtgcatcaaattttcaaaacataaa
aattggtAGAATCTTGATTTCCTGTTTTAATTctagctttttctaatctt
taTGCTGTTCTGGACACAGtttttggttaattttgaaattaattgggtgt
ttgtgaatttttgcctttttcaaaagctaaaatctaccaaaattacAAGA
GATTTTCTGTGATAACTTCTTTCTATCAGGGTCAAATTTTAGCTTAAAAT
GTTCAGGCTCTatcatgaattttcaattttaataccgggtgcgccacaaa
aaagtttctctctttgaaactaattttctcgaaatctaaaaaatttaaaa
gaaccattcctatttcattggaaagaagaaagataaacttaaattttgtt
gggtcatttattaaatttgattcattagatcaaaagttatactcaattga
atgaaaaagttactttcagaaagtgctcgaaaacgttgaaaatcgaccta
tcaaatttttattttaaaattggcaatcacaatagcctttgcatgattaa
gagcatttttcagtaactaaacacataaattttgaaactgaagggttgaa
agggtttaaaatattcatcaaaatcactttaatttacttttaccgaaatt
ttcctccgatttttggttctagacttgataaagtctatgtaaggctggat
ctacctcgaaacccgtaTTTGATGtacttttatgaattttatcagatttt
ttggcctttttggaCGAATTCTcttcatttcattgaaattcaaccttcct
ttatacaaaaaaggtcatttagacagctaattatcatttttaataacaga
aacgaaaatactgatgtatcatgtaattatgcttctgtttgatttgatag
gtcgatttttaacgtttttgagaacttttagaaagaagcttttttattca
attgatcataacttttgatctaatgaatcgaatttaataaatgacccatc
aaaactTAAGTTTACCTTTCTCCTtgccaatgaaataggaatggttcttt
taaaatttttagatttcaagaaaattagtttcaaagagagaaactttttt
gtggtgcacccggtagaatGGAAATTTATTTGTATGATCCAatgtaattt
tttaagaaatttttttctttagaccACGGAGAGACAAAACCAAAACCTCG
AAATCTCAAATCAACAGACCCCAACCCACATGCAACTGGTGAACCAAGGT
GTTTATTTAGAGCTACCAATGGCAAGAAGAAATTGAGCACCGTTGTAAGT
ATAACGCTTGAGACAATAATCATGAGaaatttttgaatgccatcaATGAT
AATCAATGATAATCAATAAAGTTTTTACTCAAACCTCGTGAGTCAAGAGA
CAAGATTTTTTCATCATACTATTAGAAACATAATATCCaaaaaaaCCTTG
ATCGACCttctgtttttttctggaatgagTAACTAAGATAGTCACTCGGA
TTCACTTCAgaattttccagtgtttttgaTTGGGAAAATGATGATGTTTT
TATTACACAAGATTTTAAACATCTATTAAATgagtttccaattttttttc
aatggatTCTACTTGTATGTTCTggattgattattttcagtcgAAAATAA
TACATTGaagaataaaaagatattttcttttattCCAGGTGATGCATAAA
GATGTTAATAAATTTCAAGTAGTAAGtatatgatttttgatttcgCTAGG
AAGTGACGGCATTATATAATTccatttgattttcaaagaagGGAGCAAAT
ACGTATTTTGAGCTTTTTGTTGTTAATTTGtagtatcaaactttttcctT
GCCTGTTCTTGAATTGTAGATTTCCCATTTTCTTTCGTACTTTATTGTCA
TTTTACTAATCAAATATATTGTTGTTCAAATTTCAGGCATACGCATCTCT
ATTGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAAGAAATCCAAAA
AGTCCAAGAAAACGAAAGCAACACAGTAG Coding sequence (CDS) from alignment at sc0000135_pilon:558228..562106+ >XLOC_000318 ID=XLOC_000318|Name=XLOC_000318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000135_pilon:558228..562106+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTTCTTGATAATGATACGATGGTTCTTCTTGATAATGATACGtt
tttgactcAACTGACTTTACTGTTCAACAAAACCAGAAGTATTGGAACTG
TTTTTGTTACAATGAAGCAATtttttgactcAACTGACTTTACTGTTCAA
CAAAACCAGAAGTATTGGAACTGTTTTTGTTACAATGAAGCAATaccACG
GAGAGACAAAACCAAAACCTCGAAATCTCAAATCAACAGACCCCAACCCA
CATGCAACTGGTGAACCAAGGTGTTTATTTAGAGCTACCAATGGCAAGAA
GAAATTGAGCACCGTTaccACGGAGAGACAAAACCAAAACCTCGAAATCT
CAAATCAACAGACCCCAACCCACATGCAACTGGTGAACCAAGGTGTTTAT
TTAGAGCTACCAATGGCAAGAAGAAATTGAGCACCGTTGTGATGCATAAA
GATGTTAATAAATTTCAAGTAGTGATGCATAAAGATGTTAATAAATTTCA
AGTAGCATACGCATCTCTATTGAAAACGAATATCGACAGTCTCAAGAAAA
GAGACAAGAAATCCAAAAAGTCCAAGAAAACGAAAGCAACACAGTAGGCA
TACGCATCTCTATTGAAAACGAATATCGACAGTCTCAAGAAAAGAGACAA
GAAATCCAAAAAGTCCAAGAAAACGAAAGCAACACAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:558228..562106 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-345:3787 |
| Aaloc | 220-252:3539 |
| Aaloc | 100-219:3025 |
| Aaloc | 25-96:1564 |
| Aaloc | 1-24:1 |
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