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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:720235..725301+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_000314 ID=XLOC_000314|Name=XLOC_000314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5067bp|location=Sequence derived from alignment at sc0000135_pilon:720235..725301+ (Clytia hemisphaerica_ch_hm2_pilon)
cttccaaaaaaacaaattttaaagatGGCGGCTCTTGCTACGAGAAGCAC
GTTTTTACTTCAGCAACAAAGAACTCTTCCAGTGTGCAGTGTTATTTTTT
CTAGAGGATTgaagaagaaccaactttacaagaagaagaagaagagaaag
atcaaggaaagagacggtaaagaagTCACGGTTGAACATATTTTCTGGGA
CAAATATTATGCAGACAACCCATCAATTCTTGCTGAGCGTCAAATGATAA
ACACCAAAAGTAGTGCAAGTGGCAGTACTGTTGTTGAAGGAGGAGGTTCC
CGTCCATTAAGTGCAAGAAAGGTTTATGACACACTGACCACAGGAGACAA
GaggttttttattattatatctccttttttccctttttttaggGCTAGGG
TGGTCACGCACTCACATCAATTGACGTTAGGcgagagaaatttttttctt
caccctttcttcaataaattgaagatgagaaaaaacctaagccttagaat
cacagatggaaaaaaatatatgaaggtgggattttacagccgtcCGTCGT
GCAAGGCACGTCAGGGATTACCATagttgtcaatgtgttgtgtcagcttg
tcagcattgtattgttatAAAGGGAAAGAtgaaagaggtaagactagcct
agctTCTATAgaagtttaagtttagactgtgtttatatcaaaatctgcaa
caaaaaatgaaagttgtCTCTTCTTACTGATTGCTTCGTGGCACTCTATC
GCGGACTATttatcagtgcgtcacaaacagccatatatagggtgcgcact
cgtcgggattttttgcgcggaacgaggaagaatttacaaaaatgaacttc
aaggcattagtacttacctttaaatcatccaaatgtgctcattctttttt
ttaaatcaatcaggaattatcagggaaacaagtaaaaaaaactgcatcaa
ggtatctattttctttccaaagatattcatgtttttcgacgtcaaggtga
aaacgcgatttagcgctgaccacggcaccggaaaattctcgacccacatt
gaaacaaatgactgtcgctattgagctggtccatcttttcaatcgcggtt
tttttagtaaacccagggtaagattaagctacaatctatcacaacctgct
ttatttgaaaatctacaggccgtctggaatttcgaaaaataagaagaaat
tgcgattttttaacaagattgcggattttttcatttaagcaccatacacc
atctgaaagctgaggatttcagctttctagtggtgaaatttgtttttagc
tatcatttccagctcattagcgataagctaaagtttaacagtcatcgggc
cgattttcagaccgcaccggcaaaactccccacaccccgccacacggaag
actagatttcatccgccatttttggcgcgattttggtgcttccgaaaatt
atttcttgctggcgtggtgtaaggaggcgattctttgaaaaggtgatttt
tttgtgttttgaaaatggaataactttgggaatacttaaccaattttaat
aaatgacccctcatttttctcacaaaggtaaggattttcaaataaaatta
gtttggttttttaaaatttagggGAAAATTTTGTCCTGTCCACCCtacca
tataaacaaaactcaacattctcacaaaagttgtctttttgatttcccaa
acattcgtctcaagcgttcccttccacaataatttatgtaattgcaattg
cggtcagtccacagtcggcttcaacatatacacgtgtttttatttacgtg
accgaagtgcctactaaaacaatccgggggtaaatagcgaagcaacacag
cagattattcgtaagtatcttttggcattgacaatcaaatacaatatatt
atactatatttccttaattcaaaaatcaaaaattcatctttcattcgcaa
aaaataaaaataaaagaataatgaattaatattacatactaagacgcccc
cgtcttttactctcatttaatttccaatctcggcacgtgcaaaacgcccg
tccgcccaatacccacccaatcagcttaaattcactttaattgtcctttg
acattcaaaaaatagtatttaaaaattatgaatttataataattacaaaa
aacaaaaagtttgatatatacttcattggtgaaatattcaataaattcct
ggtttcaattttcagtgggcgttcttctagggcttcgtttatcgcgcaat
ttttgcatcacacaaactttctcggccgctcgtaataattatacattgcc
aaatttggttctccattgtcgagtcaggatcgatggtgacgtcacctaag
cataaaaaagaaaggatttcgtcagttttatgcatatattaatttgcgag
atattctattcgccgcgcgagcgcacttttcgtagactattcagagtact
ttcttttactcgcgggattgatggtaacttttcatcttcgttatttttaa
aatgaagcacaaccgaaaaaaaacgaaacttcagaaagttgcgtatttcc
agtgagtaaacgactctgacaattaacaaaattgatgatgatgatttttt
ttcggtcaggccaatgtctcgcattgggggttctagtcttgagcccaaag
cctacgcaggattgcagcgtttgggtaaacgagacaaaactctaaaaaag
ctggtgttttgacgcgcttccgtgctctcgaaatatcgcggtttgaGACG
CACTGTTTATTTAATTTCCACCAATAAGATTGCTGCATTTCATACAGCCC
TTCtctttggcacccgtggcctttcagtgccttgaagcacaggcggctgt
aaaatctctCCCTTCATAAaacttcttttatttgtttcaatccatgATCC
TGAGGAGTACACTATATTTCTCATCCTCAATTCTCCAAAGAAAGCGGAAA
TTTAATtaatgcgagagttagattgtcaacaaaaagTGCcattaaaaatc
attgaataataGAAGAGCTTAAaatctcaaatattttcattttgaagaat
tgctacaaaaaagtgaaacatggaagaGTCattgaaatgggggatttgga
aaactttctatataccgggtgacccacgaaaaagttcagacgtttcctgA
CATCTTGAgaccgaacaaatgtcccaaagtgcttggagttttgatattta
gaaagtagatatcctaacttaaaatttgagctatcactttttaaatttga
ccaatttgttctccacttatgagcttttaaagtcaaaattcacttttcgg
aaagtgtaaaaaacacgtaaaaaagaggtattaaatttaagcaatcaatt
agaaaatcacttacaaattgacttatttaacgagttttgtgacattaata
attaataaaaacacttttagaagtaatttttgtttaaaacaagtctagtt
tttataaaaattggcgcttttgtagatttttttcagattttaccaaattt
gataccccttttttacgtgttttttacactttccaaaaagtgaattttga
ctttaaaagctcacaAGCGgagaacaaattggtcaaatttaaaaagtgat
agctcaaattttaagttaggatatctaatttctaaatatcaaaactccaa
gcactttgggacatttgttcggcctcaagacgtcaaGAAAcatctgaact
ttttcgtgggtcacccggtattatgtttagttttttgcaaaaacccctgt
aactatgagCAAGCACCCCGTTGTTAAGattggcttgaaatcaaaaatga
aaccactgaaaacgaaagtaaaattggcccgcactccaaatcccgtaatc
ttgatataggagtttaagtctgTTTAGTAAATGTGCAAGAGGTAGCGAAA
TAATGTGTCTGACGAAGGGTTAAATGTCTCAAGATTTAGTTTTATTACCA
CAGTGGCAATGTTTTCAAAGAGGTGTAGAGACAGGTAGGGATTCATCAAC
AGAACATCCAATTGATGTTTTCTGTGGTAATTTTGAGTTTGAATGGCTCC
CCATGaacataccgggtgcgccacaaaaaagtttctctctttaaaactaa
ttttctcaaaatctaaaatttttagaaGAACCATTccaatttcattggaa
agaagaaagataaacttaaattttgataggttatttattaaatttgattc
attagatcaaaagttatgctcaattaaataaaaaagttactttctgaaag
tgctcaaaaaggttaaaaatcgaccttctatcaaatcaaacagaagcata
attacttgttacatcagtattttcgctttagtcattaaaaatgataatta
gctgtctaaatgatcTTTTGTTGTATAATGGAAGGTTTAATTTCAACaaa
aggcagaaaattcgtcgaaaaaggccaaaaatccagtaaaattcataaaa
atacataaaaatatgGGTTTTGCGGTACATCCAGTCTTACTAGACTTTAT
CCAATCTAAAACCAAAAATGTGaggaaaatttgggtaaaatAATTTAAGG
TGATCTTGattaagattttaaacccttttgacccttcagtttcgaaattt
atgtgtttaattacttaaaaatgtttttaattatgTAAAGGCTATCGTAT
Tgccaattttgaaatgaaaatttgataggttgattttcaacgtttttgag
cactttctgaaagtaacttttttattcaattgagcataacttttgattta
atgaatcaaatttaataaatgacccatcaaaatttaagtttacctttctt
ctttccaatgaaattggaaaggttctttcaaaatttttagatttcaagaa
aattagttttaaagagagaaacttttttgtggcgcacccggtagaaaaat
aaaccttttccTAATCATGATGTCATATCACATAATAAAAATGTTAgact
ttgttttaaaaaaacttgagaAGACTACTCAATCAATTTTATCTTCACAG
GCTTGCCATTGCTGGTGTATTTGCTTTGGTCACTGGATTCATTGCAATGA
AGATCACCTTTGCTTAG Coding sequence (CDS) from alignment at sc0000135_pilon:720235..725301+ >XLOC_000314 ID=XLOC_000314|Name=XLOC_000314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000135_pilon:720235..725301+ (Clytia hemisphaerica_ch_hm2_pilon)
cttccaaaaaaacaaattttaaagatGGCGGCTCTTGCTACGAGAAGCAC
GTTTTTACTTCAGCAACAAAGAACTCTTCCAGTGTGCAGTGTTATTTTTT
CTAGAGGATTgaagaagaaccaactttacaagaagaagaagaagagaaag
atcaaggaaagagacggtaaagaagTCACGGTTGAACATATTTTCTGGGA
CAAATATTATGCAGACAACCCATCAATTCTTGCTGAGCGTCAAATGATAA
ACACCAAAAGTAGTGCAAGTGGCAGTACTGTTGTTGAAGGAGGAGGTTCC
CGTCCATTAAGTGCAAGAAAGGTTTATGACACACTGACCACAGGAGACAA
GagcttccaaaaaaacaaattttaaagatGGCGGCTCTTGCTACGAGAAG
CACGTTTTTACTTCAGCAACAAAGAACTCTTCCAGTGTGCAGTGTTATTT
TTTCTAGAGGATTgaagaagaaccaactttacaagaagaagaagaagaga
aagatcaaggaaagagacggtaaagaagTCACGGTTGAACATATTTTCTG
GGACAAATATTATGCAGACAACCCATCAATTCTTGCTGAGCGTCAAATGA
TAAACACCAAAAGTAGTGCAAGTGGCAGTACTGTTGTTGAAGGAGGAGGT
TCCCGTCCATTAAGTGCAAGAAAGGTTTATGACACACTGACCACAGGAGA
CAAGagGCTTGCCATTGCTGGTGTATTTGCTTTGGTCACTGGATTCATTG
CAATGAAGATCACCTTTGCTTAGGCTTGCCATTGCTGGTGTATTTGCTTT
GGTCACTGGATTCATTGCAATGAAGATCACCTTTGCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:720235..725301 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 355-420:5002 |
| Aaloc | 1-351:1 |
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